Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
NOD1Q9Y239 SNORD114-10-201ENST00000363409 72 ntBASIC2.54□□□□□ -2
NOD1Q9Y239 SNORD38.1-201ENST00000363863 68 ntBASIC2.54□□□□□ -2
NOD1Q9Y239 RNA5SP48-201ENST00000363969 126 ntBASIC2.54□□□□□ -2
NOD1Q9Y239 RNU6-865P-201ENST00000364772 107 ntBASIC2.54□□□□□ -2
NOD1Q9Y239 SNORD41-201ENST00000386967 70 ntBASIC2.54□□□□□ -2
NOD1Q9Y239 RNU7-137P-201ENST00000516788 62 ntBASIC2.54□□□□□ -2
NOD1Q9Y239 MIR5007-201ENST00000583098 95 ntBASIC2.54□□□□□ -2
NOD1Q9Y239 AL773524.1-201ENST00000614065 229 ntBASIC2.54□□□□□ -2
NOD1Q9Y239 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.54□□□□□ -2
NOD1Q9Y239 Y_RNA.140-201ENST00000363474 103 ntBASIC2.53□□□□□ -2
NOD1Q9Y239 Y_RNA.190-201ENST00000363964 101 ntBASIC2.53□□□□□ -2
NOD1Q9Y239 RNU6-573P-201ENST00000383938 106 ntBASIC2.53□□□□□ -2
NOD1Q9Y239 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.53□□□□□ -2
NOD1Q9Y239 MIR764-201ENST00000390811 85 ntBASIC2.53□□□□□ -2
NOD1Q9Y239 RNU6-1321P-201ENST00000390905 107 ntBASIC2.53□□□□□ -2
NOD1Q9Y239 RNU6-592P-201ENST00000411333 103 ntBASIC2.53□□□□□ -2
NOD1Q9Y239 MIR4287-201ENST00000579398 78 ntBASIC2.53□□□□□ -2
NOD1Q9Y239 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.53□□□□□ -2
NOD1Q9Y239 AC067747.1-201ENST00000608026 250 ntBASIC2.53□□□□□ -2
NOD1Q9Y239 RNU6-813P-201ENST00000384691 107 ntBASIC2.52□□□□□ -2.01
NOD1Q9Y239 RNA5SP237-201ENST00000410414 113 ntBASIC2.52□□□□□ -2.01
NOD1Q9Y239 AC244636.1-201ENST00000421152 228 ntBASIC2.52□□□□□ -2.01
NOD1Q9Y239 RNA5SP445-201ENST00000515889 115 ntBASIC2.52□□□□□ -2.01
NOD1Q9Y239 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
NOD1Q9Y239 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.52□□□□□ -2.01
NOD1Q9Y239 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.51□□□□□ -2.01
NOD1Q9Y239 RNU6-1152P-201ENST00000384576 107 ntBASIC2.51□□□□□ -2.01
NOD1Q9Y239 MIR221-201ENST00000385135 110 ntBASIC2.51□□□□□ -2.01
NOD1Q9Y239 RNU6-482P-201ENST00000391068 107 ntBASIC2.51□□□□□ -2.01
NOD1Q9Y239 AL445685.2-201ENST00000422551 342 ntBASIC2.51□□□□□ -2.01
NOD1Q9Y239 MIR3192-201ENST00000584920 77 ntBASIC2.51□□□□□ -2.01
NOD1Q9Y239 AL357312.1-201ENST00000603879 298 ntBASIC2.51□□□□□ -2.01
NOD1Q9Y239 RNU6-86P-201ENST00000606534 107 ntBASIC2.51□□□□□ -2.01
NOD1Q9Y239 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
NOD1Q9Y239 RNU6-1163P-201ENST00000364516 107 ntBASIC2.5□□□□□ -2.01
NOD1Q9Y239 RNY1P13-201ENST00000365030 105 ntBASIC2.5□□□□□ -2.01
NOD1Q9Y239 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
NOD1Q9Y239 U8.15-201ENST00000390947 134 ntBASIC2.5□□□□□ -2.01
NOD1Q9Y239 RNU6-447P-201ENST00000410293 104 ntBASIC2.5□□□□□ -2.01
NOD1Q9Y239 RNU6-1118P-201ENST00000410382 104 ntBASIC2.5□□□□□ -2.01
NOD1Q9Y239 RNU6-1076P-201ENST00000410397 104 ntBASIC2.5□□□□□ -2.01
NOD1Q9Y239 RNU6-355P-201ENST00000410427 104 ntBASIC2.5□□□□□ -2.01
NOD1Q9Y239 RNU6-791P-201ENST00000410467 104 ntBASIC2.5□□□□□ -2.01
NOD1Q9Y239 RNU6-705P-201ENST00000410601 104 ntBASIC2.5□□□□□ -2.01
NOD1Q9Y239 RNU6-1100P-201ENST00000410691 104 ntBASIC2.5□□□□□ -2.01
NOD1Q9Y239 RNU6-860P-201ENST00000410860 104 ntBASIC2.5□□□□□ -2.01
NOD1Q9Y239 RNU6-1217P-201ENST00000411276 104 ntBASIC2.5□□□□□ -2.01
NOD1Q9Y239 RNU6-785P-201ENST00000411324 104 ntBASIC2.5□□□□□ -2.01
NOD1Q9Y239 U6.90-201ENST00000614007 104 ntBASIC2.5□□□□□ -2.01
NOD1Q9Y239 IGLL4P-201ENST00000614590 133 ntBASIC2.5□□□□□ -2.01
NOD1Q9Y239 U6.70-201ENST00000620287 104 ntBASIC2.5□□□□□ -2.01
NOD1Q9Y239 MIR6132-201ENST00000622083 109 ntBASIC2.5□□□□□ -2.01
NOD1Q9Y239 MIR1245B-201ENST00000636115 69 ntBASIC2.5□□□□□ -2.01
NOD1Q9Y239 FO624990.1-201ENST00000636373 85 ntBASIC2.5□□□□□ -2.01
NOD1Q9Y239 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
NOD1Q9Y239 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
NOD1Q9Y239 RNY1P1-201ENST00000364372 112 ntBASIC2.49□□□□□ -2.01
NOD1Q9Y239 SNORA64-201ENST00000384674 134 ntBASIC2.49□□□□□ -2.01
NOD1Q9Y239 RNU7-48P-201ENST00000458875 63 ntBASIC2.49□□□□□ -2.01
NOD1Q9Y239 RPL23AP42-201ENST00000471152 471 ntBASIC2.49□□□□□ -2.01
NOD1Q9Y239 AC141846.1-201ENST00000568348 142 ntBASIC2.49□□□□□ -2.01
NOD1Q9Y239 AC015688.6-201ENST00000577737 104 ntBASIC2.49□□□□□ -2.01
NOD1Q9Y239 SNORA77B-201ENST00000578179 125 ntBASIC2.49□□□□□ -2.01
NOD1Q9Y239 PRELID3BP2-201ENST00000605362 201 ntBASIC2.49□□□□□ -2.01
NOD1Q9Y239 AL096861.1-201ENST00000610899 123 ntBASIC2.49□□□□□ -2.01
NOD1Q9Y239 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
NOD1Q9Y239 AC027119.1-201ENST00000440877 241 ntBASIC2.48□□□□□ -2.01
NOD1Q9Y239 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.47□□□□□ -2.01
NOD1Q9Y239 Y_RNA.98-201ENST00000363109 102 ntBASIC2.47□□□□□ -2.01
NOD1Q9Y239 RNA5SP99-201ENST00000364020 114 ntBASIC2.47□□□□□ -2.01
NOD1Q9Y239 SNORD58A-201ENST00000383875 65 ntBASIC2.47□□□□□ -2.01
NOD1Q9Y239 SNORD116-22-201ENST00000384430 92 ntBASIC2.47□□□□□ -2.01
NOD1Q9Y239 AC244023.1-201ENST00000426884 112 ntBASIC2.47□□□□□ -2.01
NOD1Q9Y239 RNU6-548P-201ENST00000517083 115 ntBASIC2.47□□□□□ -2.01
NOD1Q9Y239 AP003327.1-201ENST00000529684 127 ntBASIC2.47□□□□□ -2.01
NOD1Q9Y239 MIR4713-201ENST00000582691 75 ntBASIC2.47□□□□□ -2.01
NOD1Q9Y239 AC242498.1-201ENST00000604134 111 ntBASIC2.47□□□□□ -2.01
NOD1Q9Y239 AC103810.7-201ENST00000607821 91 ntBASIC2.47□□□□□ -2.01
NOD1Q9Y239 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.47□□□□□ -2.01
NOD1Q9Y239 MIR8074-201ENST00000615081 81 ntBASIC2.47□□□□□ -2.01
NOD1Q9Y239 AL662814.1-201ENST00000617364 121 ntBASIC2.47□□□□□ -2.01
NOD1Q9Y239 SEPT14P17-201ENST00000617978 177 ntBASIC2.47□□□□□ -2.01
NOD1Q9Y239 AC010297.1-201ENST00000623948 149 ntBASIC2.47□□□□□ -2.01
NOD1Q9Y239 MIR219B-201ENST00000637023 88 ntBASIC2.47□□□□□ -2.01
NOD1Q9Y239 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
NOD1Q9Y239 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
NOD1Q9Y239 MIR21-201ENST00000362134 72 ntBASIC2.46□□□□□ -2.02
NOD1Q9Y239 SNORD116-10-201ENST00000363791 102 ntBASIC2.46□□□□□ -2.02
NOD1Q9Y239 MIR548G-201ENST00000408442 89 ntBASIC2.46□□□□□ -2.02
NOD1Q9Y239 HSPE1P24-201ENST00000450782 238 ntBASIC2.46□□□□□ -2.02
NOD1Q9Y239 AL049779.4-201ENST00000604500 156 ntBASIC2.46□□□□□ -2.02
NOD1Q9Y239 RNU6-90P-201ENST00000606352 106 ntBASIC2.46□□□□□ -2.02
NOD1Q9Y239 GHRLOS.1-201ENST00000610995 70 ntBASIC2.46□□□□□ -2.02
NOD1Q9Y239 AL353997.5-201ENST00000618886 171 ntBASIC2.46□□□□□ -2.02
NOD1Q9Y239 MIR6766-201ENST00000622641 72 ntBASIC2.46□□□□□ -2.02
NOD1Q9Y239 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.45□□□□□ -2.02
NOD1Q9Y239 SNORA25.3-201ENST00000363205 127 ntBASIC2.45□□□□□ -2.02
NOD1Q9Y239 SNORA67.3-201ENST00000384366 140 ntBASIC2.45□□□□□ -2.02
NOD1Q9Y239 SNORD38.2-201ENST00000384470 69 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 226.4 ms