Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 AC105272.1-201ENST00000438604 198 ntBASIC3.65□□□□□ -1.83
TRIM35Q9UPQ4 AC108938.1-201ENST00000451204 136 ntBASIC3.65□□□□□ -1.83
TRIM35Q9UPQ4 RNU6-1194P-201ENST00000516208 104 ntBASIC3.65□□□□□ -1.83
TRIM35Q9UPQ4 GTF3AP2-201ENST00000557014 266 ntBASIC3.65□□□□□ -1.83
TRIM35Q9UPQ4 AC026271.5-201ENST00000577873 130 ntBASIC3.65□□□□□ -1.83
TRIM35Q9UPQ4 AL109933.3-201ENST00000619095 188 ntBASIC3.65□□□□□ -1.83
TRIM35Q9UPQ4 MIR7978-201ENST00000636158 59 ntBASIC3.65□□□□□ -1.83
TRIM35Q9UPQ4 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.65□□□□□ -1.83
TRIM35Q9UPQ4 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
TRIM35Q9UPQ4 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
TRIM35Q9UPQ4 AC092435.3-201ENST00000565538 3654 ntBASIC3.64□□□□□ -1.83
TRIM35Q9UPQ4 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC3.64□□□□□ -1.83
TRIM35Q9UPQ4 SNORA67.4-201ENST00000384688 142 ntBASIC3.64□□□□□ -1.83
TRIM35Q9UPQ4 RNU1-101P-201ENST00000391171 127 ntBASIC3.64□□□□□ -1.83
TRIM35Q9UPQ4 AC097510.1-201ENST00000510945 133 ntBASIC3.64□□□□□ -1.83
TRIM35Q9UPQ4 RNA5SP445-201ENST00000515889 115 ntBASIC3.64□□□□□ -1.83
TRIM35Q9UPQ4 RNU2-19P-201ENST00000517288 84 ntBASIC3.64□□□□□ -1.83
TRIM35Q9UPQ4 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
TRIM35Q9UPQ4 AC108206.1-201ENST00000570186 4159 ntBASIC3.63□□□□□ -1.83
TRIM35Q9UPQ4 RNU6-1079P-201ENST00000362861 110 ntBASIC3.63□□□□□ -1.83
TRIM35Q9UPQ4 MIR563-201ENST00000385080 79 ntBASIC3.63□□□□□ -1.83
TRIM35Q9UPQ4 AL138827.1-201ENST00000402666 306 ntBASIC3.63□□□□□ -1.83
TRIM35Q9UPQ4 AC244023.1-201ENST00000426884 112 ntBASIC3.63□□□□□ -1.83
TRIM35Q9UPQ4 AC087499.2-201ENST00000432861 149 ntBASIC3.63□□□□□ -1.83
TRIM35Q9UPQ4 MIR4709-201ENST00000577272 72 ntBASIC3.63□□□□□ -1.83
TRIM35Q9UPQ4 MIR3140-201ENST00000583685 90 ntBASIC3.63□□□□□ -1.83
TRIM35Q9UPQ4 AC242498.1-201ENST00000604134 111 ntBASIC3.63□□□□□ -1.83
TRIM35Q9UPQ4 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TRIM35Q9UPQ4 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
TRIM35Q9UPQ4 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
TRIM35Q9UPQ4 MIR588-201ENST00000384900 83 ntBASIC3.62□□□□□ -1.83
TRIM35Q9UPQ4 MIR29C-201ENST00000385231 88 ntBASIC3.62□□□□□ -1.83
TRIM35Q9UPQ4 AC099513.1-201ENST00000490423 301 ntBASIC3.62□□□□□ -1.83
TRIM35Q9UPQ4 MIR5089-201ENST00000580047 84 ntBASIC3.62□□□□□ -1.83
TRIM35Q9UPQ4 VPS35-212ENST00000640313 141 ntTSL 5 BASIC3.62□□□□□ -1.83
TRIM35Q9UPQ4 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TRIM35Q9UPQ4 RN7SL330P-201ENST00000469709 307 ntBASIC3.61□□□□□ -1.83
TRIM35Q9UPQ4 RNA5SP356-201ENST00000515972 94 ntBASIC3.61□□□□□ -1.83
TRIM35Q9UPQ4 MIR7106-201ENST00000612419 65 ntBASIC3.61□□□□□ -1.83
TRIM35Q9UPQ4 SNORA24B-201ENST00000384176 131 ntBASIC3.6□□□□□ -1.83
TRIM35Q9UPQ4 AC104389.3-201ENST00000445629 235 ntBASIC3.6□□□□□ -1.83
TRIM35Q9UPQ4 SUB1P4-201ENST00000566062 339 ntBASIC3.6□□□□□ -1.83
TRIM35Q9UPQ4 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.59□□□□□ -1.83
TRIM35Q9UPQ4 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.59□□□□□ -1.83
TRIM35Q9UPQ4 MIR424-201ENST00000362227 98 ntBASIC3.59□□□□□ -1.83
TRIM35Q9UPQ4 RNU6-824P-201ENST00000363724 104 ntBASIC3.59□□□□□ -1.83
TRIM35Q9UPQ4 MIR520A-201ENST00000384862 85 ntBASIC3.59□□□□□ -1.83
TRIM35Q9UPQ4 RNA5SP21-201ENST00000410917 96 ntBASIC3.59□□□□□ -1.83
TRIM35Q9UPQ4 RNU11-2P-201ENST00000516898 142 ntBASIC3.59□□□□□ -1.83
TRIM35Q9UPQ4 DLEU2_3.1-201ENST00000620005 73 ntBASIC3.59□□□□□ -1.83
TRIM35Q9UPQ4 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.84
TRIM35Q9UPQ4 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.84
TRIM35Q9UPQ4 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.58□□□□□ -1.84
TRIM35Q9UPQ4 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TRIM35Q9UPQ4 HMGN2P35-201ENST00000412164 270 ntBASIC3.58□□□□□ -1.84
TRIM35Q9UPQ4 BX510359.4-201ENST00000423750 193 ntBASIC3.58□□□□□ -1.84
TRIM35Q9UPQ4 AC006023.1-201ENST00000603944 259 ntBASIC3.58□□□□□ -1.84
TRIM35Q9UPQ4 AC092634.7-201ENST00000621022 103 ntBASIC3.58□□□□□ -1.84
TRIM35Q9UPQ4 TRDV1-202ENST00000621643 102 ntBASIC3.58□□□□□ -1.84
TRIM35Q9UPQ4 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
TRIM35Q9UPQ4 AC062016.1-201ENST00000355719 319 ntBASIC3.57□□□□□ -1.84
TRIM35Q9UPQ4 Y_RNA.510-201ENST00000384511 114 ntBASIC3.57□□□□□ -1.84
TRIM35Q9UPQ4 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
TRIM35Q9UPQ4 AC009474.2-201ENST00000451383 136 ntBASIC3.57□□□□□ -1.84
TRIM35Q9UPQ4 RNA5SP437-201ENST00000517249 129 ntBASIC3.57□□□□□ -1.84
TRIM35Q9UPQ4 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.57□□□□□ -1.84
TRIM35Q9UPQ4 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.57□□□□□ -1.84
TRIM35Q9UPQ4 DLEU2_3.2-201ENST00000612883 73 ntBASIC3.57□□□□□ -1.84
TRIM35Q9UPQ4 AL161431.1-201ENST00000618966 4205 ntBASIC3.57□□□□□ -1.84
TRIM35Q9UPQ4 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
TRIM35Q9UPQ4 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM35Q9UPQ4 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM35Q9UPQ4 MIR26A1-201ENST00000362205 77 ntBASIC3.56□□□□□ -1.84
TRIM35Q9UPQ4 RNU6-664P-201ENST00000362381 107 ntBASIC3.56□□□□□ -1.84
TRIM35Q9UPQ4 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.56□□□□□ -1.84
TRIM35Q9UPQ4 snoU13.27-201ENST00000459278 104 ntBASIC3.56□□□□□ -1.84
TRIM35Q9UPQ4 RNA5SP380-201ENST00000517190 98 ntBASIC3.56□□□□□ -1.84
TRIM35Q9UPQ4 MIR4319-201ENST00000577285 85 ntBASIC3.56□□□□□ -1.84
TRIM35Q9UPQ4 MIR3616-201ENST00000584070 92 ntBASIC3.56□□□□□ -1.84
TRIM35Q9UPQ4 XIST_intron.1-201ENST00000619444 68 ntBASIC3.56□□□□□ -1.84
TRIM35Q9UPQ4 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM35Q9UPQ4 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.55□□□□□ -1.84
TRIM35Q9UPQ4 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.55□□□□□ -1.84
TRIM35Q9UPQ4 MIR30D-201ENST00000362283 70 ntBASIC3.55□□□□□ -1.84
TRIM35Q9UPQ4 RNA5SP117-201ENST00000365294 118 ntBASIC3.55□□□□□ -1.84
TRIM35Q9UPQ4 MIR9-1-201ENST00000385198 89 ntBASIC3.55□□□□□ -1.84
TRIM35Q9UPQ4 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.55□□□□□ -1.84
TRIM35Q9UPQ4 RNU7-41P-201ENST00000515917 61 ntBASIC3.55□□□□□ -1.84
TRIM35Q9UPQ4 RNU6-531P-201ENST00000516694 104 ntBASIC3.55□□□□□ -1.84
TRIM35Q9UPQ4 RNA5SP137-201ENST00000516833 135 ntBASIC3.55□□□□□ -1.84
TRIM35Q9UPQ4 MIR4696-201ENST00000581431 70 ntBASIC3.55□□□□□ -1.84
TRIM35Q9UPQ4 MIR3605-201ENST00000583214 100 ntBASIC3.55□□□□□ -1.84
TRIM35Q9UPQ4 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
TRIM35Q9UPQ4 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TRIM35Q9UPQ4 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TRIM35Q9UPQ4 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
TRIM35Q9UPQ4 RNU4-58P-201ENST00000363192 141 ntBASIC3.54□□□□□ -1.84
TRIM35Q9UPQ4 RNU6-936P-201ENST00000384005 107 ntBASIC3.54□□□□□ -1.84
TRIM35Q9UPQ4 SNORD101-201ENST00000384027 73 ntBASIC3.54□□□□□ -1.84
TRIM35Q9UPQ4 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 192.5 ms