Protein–RNA interactions for Protein: Q9UPN6

SCAF8, Protein SCAF8, humanhuman

Known RBP Predictions only

Length 1,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8Q9UPN6 RNA5SP136-201ENST00000410906 107 ntBASIC1.59□□□□□ -2.15
SCAF8Q9UPN6 AL035461.1-201ENST00000421490 332 ntBASIC1.59□□□□□ -2.15
SCAF8Q9UPN6 RPS29P29-201ENST00000456396 171 ntBASIC1.59□□□□□ -2.15
SCAF8Q9UPN6 RNU2-11P-201ENST00000459191 187 ntBASIC1.59□□□□□ -2.15
SCAF8Q9UPN6 SNORA74.3-201ENST00000517108 154 ntBASIC1.59□□□□□ -2.15
SCAF8Q9UPN6 MIR3664-201ENST00000579074 99 ntBASIC1.59□□□□□ -2.15
SCAF8Q9UPN6 AC021443.1-201ENST00000604478 211 ntBASIC1.59□□□□□ -2.15
SCAF8Q9UPN6 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
SCAF8Q9UPN6 MIR302B-201ENST00000362188 73 ntBASIC1.58□□□□□ -2.16
SCAF8Q9UPN6 RNU4-16P-201ENST00000364737 141 ntBASIC1.58□□□□□ -2.16
SCAF8Q9UPN6 RNU6-44P-201ENST00000384045 107 ntBASIC1.58□□□□□ -2.16
SCAF8Q9UPN6 MIR570-201ENST00000384917 97 ntBASIC1.58□□□□□ -2.16
SCAF8Q9UPN6 RNU7-67P-201ENST00000459003 62 ntBASIC1.58□□□□□ -2.16
SCAF8Q9UPN6 Y_RNA.649-201ENST00000459077 103 ntBASIC1.58□□□□□ -2.16
SCAF8Q9UPN6 RNY4P20-201ENST00000516678 93 ntBASIC1.58□□□□□ -2.16
SCAF8Q9UPN6 RNU6-958P-201ENST00000516995 106 ntBASIC1.58□□□□□ -2.16
SCAF8Q9UPN6 AC019176.1-201ENST00000518519 225 ntBASIC1.58□□□□□ -2.16
SCAF8Q9UPN6 AL512310.8-201ENST00000550183 120 ntBASIC1.58□□□□□ -2.16
SCAF8Q9UPN6 PVT1_3.1-201ENST00000620853 95 ntBASIC1.58□□□□□ -2.16
SCAF8Q9UPN6 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
SCAF8Q9UPN6 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
SCAF8Q9UPN6 SNORA24-201ENST00000384096 131 ntBASIC1.57□□□□□ -2.16
SCAF8Q9UPN6 SNORA70.7-201ENST00000384159 133 ntBASIC1.57□□□□□ -2.16
SCAF8Q9UPN6 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.57□□□□□ -2.16
SCAF8Q9UPN6 RPS27P16-201ENST00000425758 201 ntBASIC1.57□□□□□ -2.16
SCAF8Q9UPN6 RNU7-164P-201ENST00000459221 62 ntBASIC1.57□□□□□ -2.16
SCAF8Q9UPN6 COX6CP6-201ENST00000490840 228 ntBASIC1.57□□□□□ -2.16
SCAF8Q9UPN6 RNA5SP61-201ENST00000516453 100 ntBASIC1.57□□□□□ -2.16
SCAF8Q9UPN6 MIR4305-201ENST00000583252 102 ntBASIC1.57□□□□□ -2.16
SCAF8Q9UPN6 MIR4791-201ENST00000607666 84 ntBASIC1.57□□□□□ -2.16
SCAF8Q9UPN6 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.57□□□□□ -2.16
SCAF8Q9UPN6 MIR6779-201ENST00000617283 64 ntBASIC1.57□□□□□ -2.16
SCAF8Q9UPN6 AC243994.1-201ENST00000618627 109 ntBASIC1.57□□□□□ -2.16
SCAF8Q9UPN6 Y_RNA.298-201ENST00000364960 107 ntBASIC1.56□□□□□ -2.16
SCAF8Q9UPN6 SNORD116-21-201ENST00000384507 92 ntBASIC1.56□□□□□ -2.16
SCAF8Q9UPN6 MIR548A1-201ENST00000385041 97 ntBASIC1.56□□□□□ -2.16
SCAF8Q9UPN6 RNY4P18-201ENST00000391107 89 ntBASIC1.56□□□□□ -2.16
SCAF8Q9UPN6 SNORA40.6-201ENST00000391153 128 ntBASIC1.56□□□□□ -2.16
SCAF8Q9UPN6 RNU7-45P-201ENST00000459460 63 ntBASIC1.56□□□□□ -2.16
SCAF8Q9UPN6 RNU6-589P-201ENST00000516485 107 ntBASIC1.56□□□□□ -2.16
SCAF8Q9UPN6 RNU7-53P-201ENST00000516705 60 ntBASIC1.56□□□□□ -2.16
SCAF8Q9UPN6 AC021613.1-201ENST00000623880 111 ntBASIC1.56□□□□□ -2.16
SCAF8Q9UPN6 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.56□□□□□ -2.16
SCAF8Q9UPN6 AL161722.3-201ENST00000605789 2983 ntBASIC1.56□□□□□ -2.16
SCAF8Q9UPN6 Y_RNA.354-201ENST00000365448 111 ntBASIC1.55□□□□□ -2.16
SCAF8Q9UPN6 Y_RNA.537-201ENST00000384626 109 ntBASIC1.55□□□□□ -2.16
SCAF8Q9UPN6 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
SCAF8Q9UPN6 RNU7-123P-201ENST00000515911 60 ntBASIC1.55□□□□□ -2.16
SCAF8Q9UPN6 RNU2-35P-201ENST00000516446 142 ntBASIC1.55□□□□□ -2.16
SCAF8Q9UPN6 RNU7-43P-201ENST00000516554 64 ntBASIC1.55□□□□□ -2.16
SCAF8Q9UPN6 Y_RNA.709-201ENST00000516952 92 ntBASIC1.55□□□□□ -2.16
SCAF8Q9UPN6 MIR3660-201ENST00000584845 100 ntBASIC1.55□□□□□ -2.16
SCAF8Q9UPN6 Y_RNA.35-201ENST00000362601 101 ntBASIC1.54□□□□□ -2.16
SCAF8Q9UPN6 Y_RNA.198-201ENST00000364013 98 ntBASIC1.54□□□□□ -2.16
SCAF8Q9UPN6 RNU6-1067P-201ENST00000384752 107 ntBASIC1.54□□□□□ -2.16
SCAF8Q9UPN6 RNU6-913P-201ENST00000390913 95 ntBASIC1.54□□□□□ -2.16
SCAF8Q9UPN6 RNA5SP144-201ENST00000410846 116 ntBASIC1.54□□□□□ -2.16
SCAF8Q9UPN6 RPL39P39-201ENST00000455840 151 ntBASIC1.54□□□□□ -2.16
SCAF8Q9UPN6 RNU7-73P-201ENST00000458743 63 ntBASIC1.54□□□□□ -2.16
SCAF8Q9UPN6 MIR4764-201ENST00000580680 88 ntBASIC1.54□□□□□ -2.16
SCAF8Q9UPN6 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.54□□□□□ -2.16
SCAF8Q9UPN6 SNORA51.10-201ENST00000384418 136 ntBASIC1.53□□□□□ -2.16
SCAF8Q9UPN6 MIR520C-201ENST00000385005 87 ntBASIC1.53□□□□□ -2.16
SCAF8Q9UPN6 SNORD41-201ENST00000386967 70 ntBASIC1.53□□□□□ -2.16
SCAF8Q9UPN6 MT-TI-201ENST00000387365 69 ntBASIC1.53□□□□□ -2.16
SCAF8Q9UPN6 RNU6-1319P-201ENST00000390855 104 ntBASIC1.53□□□□□ -2.16
SCAF8Q9UPN6 RNU6-747P-201ENST00000390928 104 ntBASIC1.53□□□□□ -2.16
SCAF8Q9UPN6 RNU6-241P-201ENST00000391148 104 ntBASIC1.53□□□□□ -2.16
SCAF8Q9UPN6 RNU6-1190P-201ENST00000410811 104 ntBASIC1.53□□□□□ -2.16
SCAF8Q9UPN6 RNU6-177P-201ENST00000411257 104 ntBASIC1.53□□□□□ -2.16
SCAF8Q9UPN6 RNU6-922P-201ENST00000516753 99 ntBASIC1.53□□□□□ -2.16
SCAF8Q9UPN6 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
SCAF8Q9UPN6 AC008133.2-201ENST00000624540 351 ntBASIC1.53□□□□□ -2.16
SCAF8Q9UPN6 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
SCAF8Q9UPN6 RNU6-880P-201ENST00000384526 107 ntBASIC1.52□□□□□ -2.17
SCAF8Q9UPN6 RNU6-1104P-201ENST00000384723 104 ntBASIC1.52□□□□□ -2.17
SCAF8Q9UPN6 SNORA26.6-201ENST00000391256 115 ntBASIC1.52□□□□□ -2.17
SCAF8Q9UPN6 POLR2J4-204ENST00000418424 324 ntBASIC1.52□□□□□ -2.17
SCAF8Q9UPN6 AC063976.4-201ENST00000421971 163 ntBASIC1.52□□□□□ -2.17
SCAF8Q9UPN6 AC022523.2-201ENST00000561045 150 ntBASIC1.52□□□□□ -2.17
SCAF8Q9UPN6 AL020996.3-201ENST00000606617 222 ntBASIC1.52□□□□□ -2.17
SCAF8Q9UPN6 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.52□□□□□ -2.17
SCAF8Q9UPN6 MIR8065-201ENST00000620577 100 ntBASIC1.52□□□□□ -2.17
SCAF8Q9UPN6 AP000648.3-201ENST00000623539 4507 ntBASIC1.51□□□□□ -2.17
SCAF8Q9UPN6 SNORA63.4-201ENST00000362763 126 ntBASIC1.51□□□□□ -2.17
SCAF8Q9UPN6 Y_RNA.213-201ENST00000364178 111 ntBASIC1.51□□□□□ -2.17
SCAF8Q9UPN6 MIR548J-201ENST00000408833 112 ntBASIC1.51□□□□□ -2.17
SCAF8Q9UPN6 AL022718.1-201ENST00000412004 84 ntBASIC1.51□□□□□ -2.17
SCAF8Q9UPN6 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.51□□□□□ -2.17
SCAF8Q9UPN6 snoU13.16-201ENST00000459350 104 ntBASIC1.51□□□□□ -2.17
SCAF8Q9UPN6 RN7SKP88-201ENST00000516847 250 ntBASIC1.51□□□□□ -2.17
SCAF8Q9UPN6 AC007012.1-201ENST00000567192 175 ntBASIC1.51□□□□□ -2.17
SCAF8Q9UPN6 MIR3152-201ENST00000579801 74 ntBASIC1.51□□□□□ -2.17
SCAF8Q9UPN6 7SK.8-201ENST00000612110 250 ntBASIC1.51□□□□□ -2.17
SCAF8Q9UPN6 7SK.11-201ENST00000615477 250 ntBASIC1.51□□□□□ -2.17
SCAF8Q9UPN6 7SK.13-201ENST00000622040 250 ntBASIC1.51□□□□□ -2.17
SCAF8Q9UPN6 SNORA22-201ENST00000383907 134 ntBASIC1.5□□□□□ -2.17
SCAF8Q9UPN6 RNU6-1054P-201ENST00000411293 104 ntBASIC1.5□□□□□ -2.17
SCAF8Q9UPN6 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.5□□□□□ -2.17
SCAF8Q9UPN6 AL512326.2-201ENST00000426359 151 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms