Protein–RNA interactions for Protein: Q9ULT6

ZNRF3, E3 ubiquitin-protein ligase ZNRF3, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3Q9ULT6 AL096840.1-201ENST00000603287 93 ntBASIC2.04□□□□□ -2.08
ZNRF3Q9ULT6 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
ZNRF3Q9ULT6 SNORA63.5-201ENST00000363548 123 ntBASIC2.03□□□□□ -2.08
ZNRF3Q9ULT6 Y_RNA.281-201ENST00000364774 94 ntBASIC2.03□□□□□ -2.08
ZNRF3Q9ULT6 RNU6-392P-201ENST00000364926 101 ntBASIC2.03□□□□□ -2.08
ZNRF3Q9ULT6 SNORD1A-201ENST00000364968 72 ntBASIC2.03□□□□□ -2.08
ZNRF3Q9ULT6 Y_RNA.362-201ENST00000365518 110 ntBASIC2.03□□□□□ -2.08
ZNRF3Q9ULT6 MIR548D2-201ENST00000384955 97 ntBASIC2.03□□□□□ -2.08
ZNRF3Q9ULT6 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.03□□□□□ -2.08
ZNRF3Q9ULT6 MIR4419B-201ENST00000577260 68 ntBASIC2.03□□□□□ -2.08
ZNRF3Q9ULT6 AL645939.4-201ENST00000604495 135 ntBASIC2.03□□□□□ -2.08
ZNRF3Q9ULT6 MIR8055-201ENST00000610739 97 ntBASIC2.03□□□□□ -2.08
ZNRF3Q9ULT6 Z97988.1-201ENST00000637697 135 ntBASIC2.03□□□□□ -2.08
ZNRF3Q9ULT6 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
ZNRF3Q9ULT6 MIR302D-201ENST00000362275 68 ntBASIC2.02□□□□□ -2.09
ZNRF3Q9ULT6 Y_RNA.49-201ENST00000362714 112 ntBASIC2.02□□□□□ -2.09
ZNRF3Q9ULT6 MT-TI-201ENST00000387365 69 ntBASIC2.02□□□□□ -2.09
ZNRF3Q9ULT6 SNORD77B-201ENST00000391112 67 ntBASIC2.02□□□□□ -2.09
ZNRF3Q9ULT6 MIR1276-201ENST00000408707 83 ntBASIC2.02□□□□□ -2.09
ZNRF3Q9ULT6 RNA5SP489-201ENST00000410986 109 ntBASIC2.02□□□□□ -2.09
ZNRF3Q9ULT6 AC009474.2-201ENST00000451383 136 ntBASIC2.02□□□□□ -2.09
ZNRF3Q9ULT6 SNORD53B-201ENST00000577887 78 ntBASIC2.02□□□□□ -2.09
ZNRF3Q9ULT6 MIR4448-201ENST00000584360 86 ntBASIC2.02□□□□□ -2.09
ZNRF3Q9ULT6 AL096861.1-201ENST00000610899 123 ntBASIC2.02□□□□□ -2.09
ZNRF3Q9ULT6 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.02□□□□□ -2.09
ZNRF3Q9ULT6 RNU1-42P-201ENST00000364033 160 ntBASIC2.01□□□□□ -2.09
ZNRF3Q9ULT6 RNU6-60P-201ENST00000364792 103 ntBASIC2.01□□□□□ -2.09
ZNRF3Q9ULT6 SUMO2P12-201ENST00000405924 140 ntBASIC2.01□□□□□ -2.09
ZNRF3Q9ULT6 AC245047.7-201ENST00000440265 293 ntBASIC2.01□□□□□ -2.09
ZNRF3Q9ULT6 RPL30P7-201ENST00000479312 323 ntBASIC2.01□□□□□ -2.09
ZNRF3Q9ULT6 MIR514B-201ENST00000516774 80 ntBASIC2.01□□□□□ -2.09
ZNRF3Q9ULT6 AL035470.1-201ENST00000622571 220 ntBASIC2.01□□□□□ -2.09
ZNRF3Q9ULT6 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
ZNRF3Q9ULT6 SNORD115-2-201ENST00000362842 82 ntBASIC2□□□□□ -2.09
ZNRF3Q9ULT6 Y_RNA.85-201ENST00000363014 111 ntBASIC2□□□□□ -2.09
ZNRF3Q9ULT6 RNU6-1107P-201ENST00000364817 104 ntBASIC2□□□□□ -2.09
ZNRF3Q9ULT6 SNORD115-20-201ENST00000365099 82 ntBASIC2□□□□□ -2.09
ZNRF3Q9ULT6 Y_RNA.549-201ENST00000384657 102 ntBASIC2□□□□□ -2.09
ZNRF3Q9ULT6 SNORD38B-201ENST00000384690 67 ntBASIC2□□□□□ -2.09
ZNRF3Q9ULT6 RNU4-69P-201ENST00000410677 143 ntBASIC2□□□□□ -2.09
ZNRF3Q9ULT6 RNU6-1258P-201ENST00000516911 111 ntBASIC2□□□□□ -2.09
ZNRF3Q9ULT6 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2□□□□□ -2.09
ZNRF3Q9ULT6 MIR3192-201ENST00000584920 77 ntBASIC2□□□□□ -2.09
ZNRF3Q9ULT6 SNORD38B-202ENST00000625943 69 ntBASIC2□□□□□ -2.09
ZNRF3Q9ULT6 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
ZNRF3Q9ULT6 RNU6-755P-201ENST00000364400 103 ntBASIC1.99□□□□□ -2.09
ZNRF3Q9ULT6 RNU6-602P-201ENST00000411155 105 ntBASIC1.99□□□□□ -2.09
ZNRF3Q9ULT6 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.99□□□□□ -2.09
ZNRF3Q9ULT6 AC008834.1-201ENST00000511612 175 ntBASIC1.99□□□□□ -2.09
ZNRF3Q9ULT6 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.99□□□□□ -2.09
ZNRF3Q9ULT6 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
ZNRF3Q9ULT6 RNU6-153P-201ENST00000364422 104 ntBASIC1.98□□□□□ -2.09
ZNRF3Q9ULT6 Y_RNA.470-201ENST00000384307 117 ntBASIC1.98□□□□□ -2.09
ZNRF3Q9ULT6 RNA5SP364-201ENST00000516938 78 ntBASIC1.98□□□□□ -2.09
ZNRF3Q9ULT6 MIR548AE2-201ENST00000583456 67 ntBASIC1.98□□□□□ -2.09
ZNRF3Q9ULT6 MIR6504-201ENST00000613520 61 ntBASIC1.98□□□□□ -2.09
ZNRF3Q9ULT6 Y_RNA.224-201ENST00000364308 111 ntBASIC1.97□□□□□ -2.09
ZNRF3Q9ULT6 Y_RNA.344-201ENST00000365381 112 ntBASIC1.97□□□□□ -2.09
ZNRF3Q9ULT6 AC027119.1-201ENST00000440877 241 ntBASIC1.97□□□□□ -2.09
ZNRF3Q9ULT6 RPL39P34-201ENST00000477141 156 ntBASIC1.97□□□□□ -2.09
ZNRF3Q9ULT6 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.97□□□□□ -2.09
ZNRF3Q9ULT6 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.97□□□□□ -2.09
ZNRF3Q9ULT6 MIR8065-201ENST00000620577 100 ntBASIC1.97□□□□□ -2.09
ZNRF3Q9ULT6 SNORA25.3-201ENST00000363205 127 ntBASIC1.96□□□□□ -2.1
ZNRF3Q9ULT6 Y_RNA.309-201ENST00000365046 111 ntBASIC1.96□□□□□ -2.1
ZNRF3Q9ULT6 SNORA32-201ENST00000384072 121 ntBASIC1.96□□□□□ -2.1
ZNRF3Q9ULT6 snoU13.18-201ENST00000459483 104 ntBASIC1.96□□□□□ -2.1
ZNRF3Q9ULT6 MIR3618-201ENST00000580330 88 ntBASIC1.96□□□□□ -2.1
ZNRF3Q9ULT6 MIR4422-201ENST00000581938 83 ntBASIC1.96□□□□□ -2.1
ZNRF3Q9ULT6 uc_338.28-201ENST00000612082 187 ntBASIC1.96□□□□□ -2.1
ZNRF3Q9ULT6 uc_338.20-201ENST00000621563 178 ntBASIC1.96□□□□□ -2.1
ZNRF3Q9ULT6 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.96□□□□□ -2.1
ZNRF3Q9ULT6 AL359851.1-201ENST00000569460 4997 ntBASIC1.96□□□□□ -2.1
ZNRF3Q9ULT6 SNORA7.1-201ENST00000363750 139 ntBASIC1.95□□□□□ -2.1
ZNRF3Q9ULT6 SNORA67.6-201ENST00000391093 99 ntBASIC1.95□□□□□ -2.1
ZNRF3Q9ULT6 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.95□□□□□ -2.1
ZNRF3Q9ULT6 AC090844.1-201ENST00000422019 156 ntBASIC1.95□□□□□ -2.1
ZNRF3Q9ULT6 AL031737.1-201ENST00000450125 223 ntBASIC1.95□□□□□ -2.1
ZNRF3Q9ULT6 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.95□□□□□ -2.1
ZNRF3Q9ULT6 RNU6-396P-201ENST00000365369 105 ntBASIC1.94□□□□□ -2.1
ZNRF3Q9ULT6 SNORA18-201ENST00000384416 132 ntBASIC1.94□□□□□ -2.1
ZNRF3Q9ULT6 Y_RNA.507-201ENST00000384500 99 ntBASIC1.94□□□□□ -2.1
ZNRF3Q9ULT6 RPL39P25-201ENST00000449384 154 ntBASIC1.94□□□□□ -2.1
ZNRF3Q9ULT6 RN7SL274P-201ENST00000492268 272 ntBASIC1.94□□□□□ -2.1
ZNRF3Q9ULT6 AC087741.2-201ENST00000619415 172 ntBASIC1.94□□□□□ -2.1
ZNRF3Q9ULT6 AL162726.3-218ENST00000636401 95 ntBASIC1.94□□□□□ -2.1
ZNRF3Q9ULT6 SNORD115-19-201ENST00000363098 82 ntBASIC1.93□□□□□ -2.1
ZNRF3Q9ULT6 SNORD115-18-201ENST00000363293 82 ntBASIC1.93□□□□□ -2.1
ZNRF3Q9ULT6 SNORD115-17-201ENST00000364612 82 ntBASIC1.93□□□□□ -2.1
ZNRF3Q9ULT6 MIR1302-5-201ENST00000408164 150 ntBASIC1.93□□□□□ -2.1
ZNRF3Q9ULT6 MIR1912-201ENST00000410389 80 ntBASIC1.93□□□□□ -2.1
ZNRF3Q9ULT6 RNA5SP237-201ENST00000410414 113 ntBASIC1.93□□□□□ -2.1
ZNRF3Q9ULT6 RNU2-40P-201ENST00000410833 196 ntBASIC1.93□□□□□ -2.1
ZNRF3Q9ULT6 AL133373.1-201ENST00000497098 94 ntBASIC1.93□□□□□ -2.1
ZNRF3Q9ULT6 AC068339.1-201ENST00000526965 141 ntBASIC1.93□□□□□ -2.1
ZNRF3Q9ULT6 MIR3664-201ENST00000579074 99 ntBASIC1.93□□□□□ -2.1
ZNRF3Q9ULT6 SNORA4-201ENST00000584302 138 ntBASIC1.93□□□□□ -2.1
ZNRF3Q9ULT6 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.92□□□□□ -2.1
ZNRF3Q9ULT6 MIR103A2-201ENST00000362154 78 ntBASIC1.92□□□□□ -2.1
ZNRF3Q9ULT6 RNU6-1014P-201ENST00000383940 103 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 187 ms