Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 RNU4-67P-201ENST00000364569 141 ntBASIC1.76□□□□□ -2.13
CDC42EP3Q9UKI2 RNA5SP138-201ENST00000365098 114 ntBASIC1.76□□□□□ -2.13
CDC42EP3Q9UKI2 RNU6-905P-201ENST00000384434 107 ntBASIC1.76□□□□□ -2.13
CDC42EP3Q9UKI2 Y_RNA.507-201ENST00000384500 99 ntBASIC1.76□□□□□ -2.13
CDC42EP3Q9UKI2 SNORA48.3-201ENST00000391081 134 ntBASIC1.76□□□□□ -2.13
CDC42EP3Q9UKI2 SNORD77B-201ENST00000391112 67 ntBASIC1.76□□□□□ -2.13
CDC42EP3Q9UKI2 AL353813.1-201ENST00000440700 253 ntBASIC1.76□□□□□ -2.13
CDC42EP3Q9UKI2 Y_RNA.677-201ENST00000516401 85 ntBASIC1.76□□□□□ -2.13
CDC42EP3Q9UKI2 CYP3A52P-201ENST00000563326 91 ntBASIC1.76□□□□□ -2.13
CDC42EP3Q9UKI2 AL096861.1-201ENST00000610899 123 ntBASIC1.76□□□□□ -2.13
CDC42EP3Q9UKI2 Y_RNA.818-201ENST00000618813 71 ntBASIC1.76□□□□□ -2.13
CDC42EP3Q9UKI2 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.76□□□□□ -2.13
CDC42EP3Q9UKI2 RNU6-1099P-201ENST00000363533 107 ntBASIC1.75□□□□□ -2.13
CDC42EP3Q9UKI2 RNU6-640P-201ENST00000363693 105 ntBASIC1.75□□□□□ -2.13
CDC42EP3Q9UKI2 RNU6-616P-201ENST00000384353 107 ntBASIC1.75□□□□□ -2.13
CDC42EP3Q9UKI2 Y_RNA.544-201ENST00000384650 113 ntBASIC1.75□□□□□ -2.13
CDC42EP3Q9UKI2 MIR590-201ENST00000385008 97 ntBASIC1.75□□□□□ -2.13
CDC42EP3Q9UKI2 MIR1302-7-201ENST00000408841 72 ntBASIC1.75□□□□□ -2.13
CDC42EP3Q9UKI2 AC245517.4-201ENST00000448601 281 ntBASIC1.75□□□□□ -2.13
CDC42EP3Q9UKI2 HSPE1P24-201ENST00000450782 238 ntBASIC1.75□□□□□ -2.13
CDC42EP3Q9UKI2 RNA5SP182-201ENST00000516064 82 ntBASIC1.75□□□□□ -2.13
CDC42EP3Q9UKI2 RNU1-40P-201ENST00000516816 164 ntBASIC1.75□□□□□ -2.13
CDC42EP3Q9UKI2 RNU1-97P-201ENST00000516872 164 ntBASIC1.75□□□□□ -2.13
CDC42EP3Q9UKI2 RNU6-158P-201ENST00000517104 100 ntBASIC1.75□□□□□ -2.13
CDC42EP3Q9UKI2 snoU13.31-201ENST00000607291 104 ntBASIC1.75□□□□□ -2.13
CDC42EP3Q9UKI2 MIR378A-201ENST00000362177 66 ntBASIC1.74□□□□□ -2.13
CDC42EP3Q9UKI2 RNU6-342P-201ENST00000384521 104 ntBASIC1.74□□□□□ -2.13
CDC42EP3Q9UKI2 MIR30A-201ENST00000385092 71 ntBASIC1.74□□□□□ -2.13
CDC42EP3Q9UKI2 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
CDC42EP3Q9UKI2 SNORA19.1-201ENST00000410656 129 ntBASIC1.74□□□□□ -2.13
CDC42EP3Q9UKI2 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.74□□□□□ -2.13
CDC42EP3Q9UKI2 AC108667.1-201ENST00000428618 249 ntBASIC1.74□□□□□ -2.13
CDC42EP3Q9UKI2 AC245047.7-201ENST00000440265 293 ntBASIC1.74□□□□□ -2.13
CDC42EP3Q9UKI2 snoU13.9-201ENST00000458927 103 ntBASIC1.74□□□□□ -2.13
CDC42EP3Q9UKI2 snoU13.25-201ENST00000458945 104 ntBASIC1.74□□□□□ -2.13
CDC42EP3Q9UKI2 RNU6-717P-201ENST00000459076 104 ntBASIC1.74□□□□□ -2.13
CDC42EP3Q9UKI2 AP003716.2-201ENST00000528260 108 ntBASIC1.74□□□□□ -2.13
CDC42EP3Q9UKI2 PRELID3BP2-201ENST00000605362 201 ntBASIC1.74□□□□□ -2.13
CDC42EP3Q9UKI2 MIR6845-201ENST00000613182 61 ntBASIC1.74□□□□□ -2.13
CDC42EP3Q9UKI2 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
CDC42EP3Q9UKI2 RNU6-1255P-201ENST00000363434 112 ntBASIC1.73□□□□□ -2.13
CDC42EP3Q9UKI2 SNORD1A-201ENST00000364968 72 ntBASIC1.73□□□□□ -2.13
CDC42EP3Q9UKI2 RNU6-409P-201ENST00000384114 104 ntBASIC1.73□□□□□ -2.13
CDC42EP3Q9UKI2 SNORD38B-201ENST00000384690 67 ntBASIC1.73□□□□□ -2.13
CDC42EP3Q9UKI2 RNU6-733P-201ENST00000410759 104 ntBASIC1.73□□□□□ -2.13
CDC42EP3Q9UKI2 AC005908.1-201ENST00000468701 347 ntBASIC1.73□□□□□ -2.13
CDC42EP3Q9UKI2 RNU6-1018P-201ENST00000516577 106 ntBASIC1.73□□□□□ -2.13
CDC42EP3Q9UKI2 SNORA44.1-201ENST00000517031 108 ntBASIC1.73□□□□□ -2.13
CDC42EP3Q9UKI2 MIR4694-201ENST00000578534 80 ntBASIC1.73□□□□□ -2.13
CDC42EP3Q9UKI2 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.73□□□□□ -2.13
CDC42EP3Q9UKI2 SNORD38B-202ENST00000625943 69 ntBASIC1.73□□□□□ -2.13
CDC42EP3Q9UKI2 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
CDC42EP3Q9UKI2 RNY3P2-201ENST00000362918 102 ntBASIC1.72□□□□□ -2.13
CDC42EP3Q9UKI2 Y_RNA.360-201ENST00000365512 102 ntBASIC1.72□□□□□ -2.13
CDC42EP3Q9UKI2 SNORA32-201ENST00000384072 121 ntBASIC1.72□□□□□ -2.13
CDC42EP3Q9UKI2 SNORA18-201ENST00000384416 132 ntBASIC1.72□□□□□ -2.13
CDC42EP3Q9UKI2 RNU6-679P-201ENST00000391003 106 ntBASIC1.72□□□□□ -2.13
CDC42EP3Q9UKI2 RNA5SP338-201ENST00000410495 85 ntBASIC1.72□□□□□ -2.13
CDC42EP3Q9UKI2 RNU6-1086P-201ENST00000410930 100 ntBASIC1.72□□□□□ -2.13
CDC42EP3Q9UKI2 AC244023.1-201ENST00000426884 112 ntBASIC1.72□□□□□ -2.13
CDC42EP3Q9UKI2 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.72□□□□□ -2.13
CDC42EP3Q9UKI2 AC242498.1-201ENST00000604134 111 ntBASIC1.72□□□□□ -2.13
CDC42EP3Q9UKI2 FAM71BP1-201ENST00000604431 523 ntBASIC1.72□□□□□ -2.13
CDC42EP3Q9UKI2 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.72□□□□□ -2.13
CDC42EP3Q9UKI2 WWP1P1-201ENST00000466609 2769 ntBASIC1.72□□□□□ -2.13
CDC42EP3Q9UKI2 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
CDC42EP3Q9UKI2 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
CDC42EP3Q9UKI2 SNORD33-201ENST00000362761 85 ntBASIC1.71□□□□□ -2.14
CDC42EP3Q9UKI2 Y_RNA.155-201ENST00000363632 101 ntBASIC1.71□□□□□ -2.14
CDC42EP3Q9UKI2 Y_RNA.355-201ENST00000365462 98 ntBASIC1.71□□□□□ -2.14
CDC42EP3Q9UKI2 Y_RNA.466-201ENST00000384294 113 ntBASIC1.71□□□□□ -2.14
CDC42EP3Q9UKI2 MIR499A-201ENST00000384903 122 ntBASIC1.71□□□□□ -2.14
CDC42EP3Q9UKI2 MIR605-201ENST00000385078 83 ntBASIC1.71□□□□□ -2.14
CDC42EP3Q9UKI2 MIR577-201ENST00000385196 96 ntBASIC1.71□□□□□ -2.14
CDC42EP3Q9UKI2 AC025033.1-201ENST00000463883 194 ntBASIC1.71□□□□□ -2.14
CDC42EP3Q9UKI2 AL133373.1-201ENST00000497098 94 ntBASIC1.71□□□□□ -2.14
CDC42EP3Q9UKI2 RNU6-109P-201ENST00000516364 107 ntBASIC1.71□□□□□ -2.14
CDC42EP3Q9UKI2 RNU6-184P-201ENST00000516514 107 ntBASIC1.71□□□□□ -2.14
CDC42EP3Q9UKI2 RNU6-521P-201ENST00000516663 105 ntBASIC1.71□□□□□ -2.14
CDC42EP3Q9UKI2 DEFB131E-201ENST00000532329 154 ntBASIC1.71□□□□□ -2.14
CDC42EP3Q9UKI2 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
CDC42EP3Q9UKI2 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.71□□□□□ -2.14
CDC42EP3Q9UKI2 AC131280.1-202ENST00000624067 4211 ntBASIC1.71□□□□□ -2.14
CDC42EP3Q9UKI2 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
CDC42EP3Q9UKI2 RNU6-832P-201ENST00000363319 107 ntBASIC1.7□□□□□ -2.14
CDC42EP3Q9UKI2 RNU4-36P-201ENST00000364294 144 ntBASIC1.7□□□□□ -2.14
CDC42EP3Q9UKI2 SNORD115-35-201ENST00000365122 82 ntBASIC1.7□□□□□ -2.14
CDC42EP3Q9UKI2 Y_RNA.377-201ENST00000365644 108 ntBASIC1.7□□□□□ -2.14
CDC42EP3Q9UKI2 SNORA40.18-201ENST00000391200 128 ntBASIC1.7□□□□□ -2.14
CDC42EP3Q9UKI2 Y_RNA.601-201ENST00000410500 113 ntBASIC1.7□□□□□ -2.14
CDC42EP3Q9UKI2 AL445685.2-201ENST00000422551 342 ntBASIC1.7□□□□□ -2.14
CDC42EP3Q9UKI2 RN7SL274P-201ENST00000492268 272 ntBASIC1.7□□□□□ -2.14
CDC42EP3Q9UKI2 RNA5SP445-201ENST00000515889 115 ntBASIC1.7□□□□□ -2.14
CDC42EP3Q9UKI2 RNU7-79P-201ENST00000516082 62 ntBASIC1.7□□□□□ -2.14
CDC42EP3Q9UKI2 SNORA40.13-201ENST00000516379 120 ntBASIC1.7□□□□□ -2.14
CDC42EP3Q9UKI2 AC141557.1-201ENST00000540982 400 ntBASIC1.7□□□□□ -2.14
CDC42EP3Q9UKI2 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.7□□□□□ -2.14
CDC42EP3Q9UKI2 AC012493.3-201ENST00000604494 112 ntBASIC1.7□□□□□ -2.14
CDC42EP3Q9UKI2 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
CDC42EP3Q9UKI2 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 173.4 ms