Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 RNU6-1054P-201ENST00000411293 104 ntBASIC1.92□□□□□ -2.1
DDX41Q9UJV9 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.92□□□□□ -2.1
DDX41Q9UJV9 AL512326.2-201ENST00000426359 151 ntBASIC1.92□□□□□ -2.1
DDX41Q9UJV9 Y_RNA.649-201ENST00000459077 103 ntBASIC1.92□□□□□ -2.1
DDX41Q9UJV9 AC113410.1-201ENST00000505029 247 ntBASIC1.92□□□□□ -2.1
DDX41Q9UJV9 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
DDX41Q9UJV9 Y_RNA.171-201ENST00000363760 102 ntBASIC1.91□□□□□ -2.1
DDX41Q9UJV9 RNU4-62P-201ENST00000410125 130 ntBASIC1.91□□□□□ -2.1
DDX41Q9UJV9 RNU6-1064P-201ENST00000410626 104 ntBASIC1.91□□□□□ -2.1
DDX41Q9UJV9 RNA5SP33-201ENST00000516687 98 ntBASIC1.91□□□□□ -2.1
DDX41Q9UJV9 PRELID3BP2-201ENST00000605362 201 ntBASIC1.91□□□□□ -2.1
DDX41Q9UJV9 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
DDX41Q9UJV9 SNORD115-2-201ENST00000362842 82 ntBASIC1.9□□□□□ -2.11
DDX41Q9UJV9 RNU6-1290P-201ENST00000362957 109 ntBASIC1.9□□□□□ -2.11
DDX41Q9UJV9 RNY1P10-201ENST00000363268 113 ntBASIC1.9□□□□□ -2.11
DDX41Q9UJV9 SNORD115-20-201ENST00000365099 82 ntBASIC1.9□□□□□ -2.11
DDX41Q9UJV9 Y_RNA.353-201ENST00000365440 108 ntBASIC1.9□□□□□ -2.11
DDX41Q9UJV9 MIR1287-201ENST00000408492 90 ntBASIC1.9□□□□□ -2.11
DDX41Q9UJV9 RNU6-321P-201ENST00000410912 106 ntBASIC1.9□□□□□ -2.11
DDX41Q9UJV9 SNORD33.1-201ENST00000516213 88 ntBASIC1.9□□□□□ -2.11
DDX41Q9UJV9 MTND5P34-201ENST00000568888 325 ntBASIC1.9□□□□□ -2.11
DDX41Q9UJV9 MIR4303-201ENST00000581299 66 ntBASIC1.9□□□□□ -2.11
DDX41Q9UJV9 MIR3163-201ENST00000581592 73 ntBASIC1.9□□□□□ -2.11
DDX41Q9UJV9 RNY4P6-201ENST00000363667 96 ntBASIC1.89□□□□□ -2.11
DDX41Q9UJV9 RNU6-476P-201ENST00000384726 107 ntBASIC1.89□□□□□ -2.11
DDX41Q9UJV9 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.89□□□□□ -2.11
DDX41Q9UJV9 MIR7111-201ENST00000619751 72 ntBASIC1.89□□□□□ -2.11
DDX41Q9UJV9 RNU6-1144P-201ENST00000384247 104 ntBASIC1.88□□□□□ -2.11
DDX41Q9UJV9 MT-TN-201ENST00000387400 73 ntBASIC1.88□□□□□ -2.11
DDX41Q9UJV9 AP1B1P2-201ENST00000416196 106 ntBASIC1.88□□□□□ -2.11
DDX41Q9UJV9 AC090844.1-201ENST00000422019 156 ntBASIC1.88□□□□□ -2.11
DDX41Q9UJV9 snoU13.25-201ENST00000458945 104 ntBASIC1.88□□□□□ -2.11
DDX41Q9UJV9 RPS23P4-201ENST00000487908 423 ntBASIC1.88□□□□□ -2.11
DDX41Q9UJV9 SNORA31.2-201ENST00000516019 134 ntBASIC1.88□□□□□ -2.11
DDX41Q9UJV9 AP003716.2-201ENST00000528260 108 ntBASIC1.88□□□□□ -2.11
DDX41Q9UJV9 MIR4264-201ENST00000583520 66 ntBASIC1.88□□□□□ -2.11
DDX41Q9UJV9 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
DDX41Q9UJV9 SNORD77B-201ENST00000391112 67 ntBASIC1.87□□□□□ -2.11
DDX41Q9UJV9 MIR1185-1-201ENST00000408598 86 ntBASIC1.87□□□□□ -2.11
DDX41Q9UJV9 MIR1302-7-201ENST00000408841 72 ntBASIC1.87□□□□□ -2.11
DDX41Q9UJV9 RNU6-735P-201ENST00000410612 107 ntBASIC1.87□□□□□ -2.11
DDX41Q9UJV9 RNU4-69P-201ENST00000410677 143 ntBASIC1.87□□□□□ -2.11
DDX41Q9UJV9 AC048334.1-201ENST00000477975 159 ntBASIC1.87□□□□□ -2.11
DDX41Q9UJV9 RNU6-970P-201ENST00000516312 107 ntBASIC1.87□□□□□ -2.11
DDX41Q9UJV9 MIR3618-201ENST00000580330 88 ntBASIC1.87□□□□□ -2.11
DDX41Q9UJV9 AL359821.1-201ENST00000605519 182 ntBASIC1.87□□□□□ -2.11
DDX41Q9UJV9 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.87□□□□□ -2.11
DDX41Q9UJV9 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.87□□□□□ -2.11
DDX41Q9UJV9 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.86□□□□□ -2.11
DDX41Q9UJV9 RNA5SP237-201ENST00000410414 113 ntBASIC1.86□□□□□ -2.11
DDX41Q9UJV9 RNU6-1258P-201ENST00000516911 111 ntBASIC1.86□□□□□ -2.11
DDX41Q9UJV9 AC022523.2-201ENST00000561045 150 ntBASIC1.86□□□□□ -2.11
DDX41Q9UJV9 RNU6-1104P-201ENST00000384723 104 ntBASIC1.85□□□□□ -2.11
DDX41Q9UJV9 RNU6-997P-201ENST00000384725 107 ntBASIC1.85□□□□□ -2.11
DDX41Q9UJV9 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.85□□□□□ -2.11
DDX41Q9UJV9 RNU1-98P-201ENST00000458992 160 ntBASIC1.85□□□□□ -2.11
DDX41Q9UJV9 TRMT112P2-201ENST00000512910 132 ntBASIC1.85□□□□□ -2.11
DDX41Q9UJV9 RNU7-6P-201ENST00000516845 62 ntBASIC1.85□□□□□ -2.11
DDX41Q9UJV9 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
DDX41Q9UJV9 SNORD116-21-201ENST00000384507 92 ntBASIC1.84□□□□□ -2.11
DDX41Q9UJV9 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.84□□□□□ -2.11
DDX41Q9UJV9 MIR6516-201ENST00000630554 81 ntBASIC1.84□□□□□ -2.11
DDX41Q9UJV9 Y_RNA.470-201ENST00000384307 117 ntBASIC1.83□□□□□ -2.12
DDX41Q9UJV9 MIR548A1-201ENST00000385041 97 ntBASIC1.83□□□□□ -2.12
DDX41Q9UJV9 SNORD12C-201ENST00000386307 89 ntBASIC1.83□□□□□ -2.12
DDX41Q9UJV9 RNU6-613P-201ENST00000410412 108 ntBASIC1.83□□□□□ -2.12
DDX41Q9UJV9 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.83□□□□□ -2.12
DDX41Q9UJV9 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.83□□□□□ -2.12
DDX41Q9UJV9 AL512598.1-201ENST00000610158 273 ntBASIC1.83□□□□□ -2.12
DDX41Q9UJV9 MIR8070-201ENST00000616510 88 ntBASIC1.83□□□□□ -2.12
DDX41Q9UJV9 SEPT14P17-201ENST00000617978 177 ntBASIC1.83□□□□□ -2.12
DDX41Q9UJV9 SNORA18-201ENST00000384416 132 ntBASIC1.82□□□□□ -2.12
DDX41Q9UJV9 RNU6-880P-201ENST00000384526 107 ntBASIC1.82□□□□□ -2.12
DDX41Q9UJV9 MRPL35P3-201ENST00000421557 364 ntBASIC1.82□□□□□ -2.12
DDX41Q9UJV9 AC007012.1-201ENST00000567192 175 ntBASIC1.82□□□□□ -2.12
DDX41Q9UJV9 MIR548AE2-201ENST00000583456 67 ntBASIC1.82□□□□□ -2.12
DDX41Q9UJV9 RNU6-1237P-201ENST00000384777 107 ntBASIC1.81□□□□□ -2.12
DDX41Q9UJV9 MIR499A-201ENST00000384903 122 ntBASIC1.81□□□□□ -2.12
DDX41Q9UJV9 AL591704.2-201ENST00000421658 181 ntBASIC1.81□□□□□ -2.12
DDX41Q9UJV9 AC244023.1-201ENST00000426884 112 ntBASIC1.81□□□□□ -2.12
DDX41Q9UJV9 AC242498.1-201ENST00000604134 111 ntBASIC1.81□□□□□ -2.12
DDX41Q9UJV9 AL645939.4-201ENST00000604495 135 ntBASIC1.81□□□□□ -2.12
DDX41Q9UJV9 MIR377-201ENST00000362145 69 ntBASIC1.8□□□□□ -2.12
DDX41Q9UJV9 RNU6-60P-201ENST00000364792 103 ntBASIC1.8□□□□□ -2.12
DDX41Q9UJV9 Y_RNA.330-201ENST00000365230 109 ntBASIC1.8□□□□□ -2.12
DDX41Q9UJV9 SNORA32-201ENST00000384072 121 ntBASIC1.8□□□□□ -2.12
DDX41Q9UJV9 SNORA80D-201ENST00000384488 135 ntBASIC1.8□□□□□ -2.12
DDX41Q9UJV9 MIR588-201ENST00000384900 83 ntBASIC1.8□□□□□ -2.12
DDX41Q9UJV9 MIR548D2-201ENST00000384955 97 ntBASIC1.8□□□□□ -2.12
DDX41Q9UJV9 snoU13.2-201ENST00000459201 104 ntBASIC1.8□□□□□ -2.12
DDX41Q9UJV9 RNU7-95P-201ENST00000459222 64 ntBASIC1.8□□□□□ -2.12
DDX41Q9UJV9 RNU6-412P-201ENST00000516434 106 ntBASIC1.8□□□□□ -2.12
DDX41Q9UJV9 RNU1-42P-201ENST00000364033 160 ntBASIC1.79□□□□□ -2.12
DDX41Q9UJV9 RNU6-910P-201ENST00000390844 107 ntBASIC1.79□□□□□ -2.12
DDX41Q9UJV9 RNU6-205P-201ENST00000390858 107 ntBASIC1.79□□□□□ -2.12
DDX41Q9UJV9 RNU7-62P-201ENST00000458856 62 ntBASIC1.79□□□□□ -2.12
DDX41Q9UJV9 SNORA70.22-201ENST00000517160 124 ntBASIC1.79□□□□□ -2.12
DDX41Q9UJV9 MIR4679-2-201ENST00000578358 77 ntBASIC1.79□□□□□ -2.12
DDX41Q9UJV9 AL589743.1-201ENST00000551932 2712 ntBASIC1.78□□□□□ -2.12
DDX41Q9UJV9 RNU6-1325P-201ENST00000364905 105 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 168.8 ms