Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 MIR4514-201ENST00000581410 57 ntBASIC0.19□□□□□ -2.38
CLCF1Q9UBD9 MIR5093-201ENST00000583199 100 ntBASIC0.19□□□□□ -2.38
CLCF1Q9UBD9 AL365205.2-201ENST00000594586 68 ntBASIC0.19□□□□□ -2.38
CLCF1Q9UBD9 MIR376A2-201ENST00000636782 80 ntBASIC0.19□□□□□ -2.38
CLCF1Q9UBD9 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.19□□□□□ -2.38
CLCF1Q9UBD9 SNORD118-201ENST00000363593 134 ntBASIC0.18□□□□□ -2.38
CLCF1Q9UBD9 RNU6-103P-201ENST00000363686 107 ntBASIC0.18□□□□□ -2.38
CLCF1Q9UBD9 Y_RNA.176-201ENST00000363815 109 ntBASIC0.18□□□□□ -2.38
CLCF1Q9UBD9 RNU6-1227P-201ENST00000383981 107 ntBASIC0.18□□□□□ -2.38
CLCF1Q9UBD9 Y_RNA.422-201ENST00000384054 114 ntBASIC0.18□□□□□ -2.38
CLCF1Q9UBD9 SNORA8.2-201ENST00000384372 139 ntBASIC0.18□□□□□ -2.38
CLCF1Q9UBD9 Y_RNA.567-201ENST00000384736 106 ntBASIC0.18□□□□□ -2.38
CLCF1Q9UBD9 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.18□□□□□ -2.38
CLCF1Q9UBD9 SNRPGP12-201ENST00000449481 213 ntBASIC0.18□□□□□ -2.38
CLCF1Q9UBD9 RNU6-635P-201ENST00000516651 102 ntBASIC0.18□□□□□ -2.38
CLCF1Q9UBD9 AL442663.2-201ENST00000554385 511 ntBASIC0.18□□□□□ -2.38
CLCF1Q9UBD9 SNORA25.18-201ENST00000607153 114 ntBASIC0.18□□□□□ -2.38
CLCF1Q9UBD9 Y_RNA.42-201ENST00000362660 108 ntBASIC0.17□□□□□ -2.38
CLCF1Q9UBD9 Y_RNA.262-201ENST00000364641 102 ntBASIC0.17□□□□□ -2.38
CLCF1Q9UBD9 Y_RNA.416-201ENST00000384014 113 ntBASIC0.17□□□□□ -2.38
CLCF1Q9UBD9 RNU4-43P-201ENST00000410628 137 ntBASIC0.17□□□□□ -2.38
CLCF1Q9UBD9 RNU6-863P-201ENST00000515989 104 ntBASIC0.17□□□□□ -2.38
CLCF1Q9UBD9 MIR8066-201ENST00000617280 78 ntBASIC0.17□□□□□ -2.38
CLCF1Q9UBD9 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
CLCF1Q9UBD9 RNU6-403P-201ENST00000363163 104 ntBASIC0.16□□□□□ -2.38
CLCF1Q9UBD9 RNA5SP62-201ENST00000363457 110 ntBASIC0.16□□□□□ -2.38
CLCF1Q9UBD9 RNU6-1099P-201ENST00000363533 107 ntBASIC0.16□□□□□ -2.38
CLCF1Q9UBD9 RNU4-67P-201ENST00000364569 141 ntBASIC0.16□□□□□ -2.38
CLCF1Q9UBD9 Y_RNA.512-201ENST00000384518 102 ntBASIC0.16□□□□□ -2.38
CLCF1Q9UBD9 MIR1295A-201ENST00000408463 79 ntBASIC0.16□□□□□ -2.38
CLCF1Q9UBD9 Y_RNA.604-201ENST00000410574 102 ntBASIC0.16□□□□□ -2.38
CLCF1Q9UBD9 SEPT7P4-201ENST00000437076 306 ntBASIC0.16□□□□□ -2.38
CLCF1Q9UBD9 RNU6-561P-201ENST00000516222 102 ntBASIC0.16□□□□□ -2.38
CLCF1Q9UBD9 AC133485.4-201ENST00000561835 220 ntBASIC0.16□□□□□ -2.38
CLCF1Q9UBD9 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.16□□□□□ -2.38
CLCF1Q9UBD9 MIR8062-201ENST00000621515 85 ntBASIC0.16□□□□□ -2.38
CLCF1Q9UBD9 RNU6-349P-201ENST00000362402 107 ntBASIC0.15□□□□□ -2.39
CLCF1Q9UBD9 RNU6-238P-201ENST00000363313 106 ntBASIC0.15□□□□□ -2.39
CLCF1Q9UBD9 RNU6-815P-201ENST00000384080 113 ntBASIC0.15□□□□□ -2.39
CLCF1Q9UBD9 Y_RNA.461-201ENST00000384263 103 ntBASIC0.15□□□□□ -2.39
CLCF1Q9UBD9 SNORD116-25-201ENST00000516517 92 ntBASIC0.15□□□□□ -2.39
CLCF1Q9UBD9 SNORA62.5-201ENST00000516634 120 ntBASIC0.15□□□□□ -2.39
CLCF1Q9UBD9 AC141846.1-201ENST00000568348 142 ntBASIC0.15□□□□□ -2.39
CLCF1Q9UBD9 MIR6718-201ENST00000616153 80 ntBASIC0.15□□□□□ -2.39
CLCF1Q9UBD9 Y_RNA.13-201ENST00000362403 112 ntBASIC0.14□□□□□ -2.39
CLCF1Q9UBD9 SNORA22.1-201ENST00000362701 134 ntBASIC0.14□□□□□ -2.39
CLCF1Q9UBD9 RNA5SP325-201ENST00000363756 130 ntBASIC0.14□□□□□ -2.39
CLCF1Q9UBD9 Y_RNA.174-201ENST00000363781 105 ntBASIC0.14□□□□□ -2.39
CLCF1Q9UBD9 Y_RNA.352-201ENST00000365439 102 ntBASIC0.14□□□□□ -2.39
CLCF1Q9UBD9 RNU6-597P-201ENST00000365620 102 ntBASIC0.14□□□□□ -2.39
CLCF1Q9UBD9 RNU6-716P-201ENST00000365621 103 ntBASIC0.14□□□□□ -2.39
CLCF1Q9UBD9 Y_RNA.483-201ENST00000384380 101 ntBASIC0.14□□□□□ -2.39
CLCF1Q9UBD9 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.14□□□□□ -2.39
CLCF1Q9UBD9 U8.15-201ENST00000390947 134 ntBASIC0.14□□□□□ -2.39
CLCF1Q9UBD9 AL512326.2-201ENST00000426359 151 ntBASIC0.14□□□□□ -2.39
CLCF1Q9UBD9 AL121914.1-201ENST00000450188 156 ntBASIC0.14□□□□□ -2.39
CLCF1Q9UBD9 RNU6-893P-201ENST00000458841 100 ntBASIC0.14□□□□□ -2.39
CLCF1Q9UBD9 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.14□□□□□ -2.39
CLCF1Q9UBD9 AL442067.1-201ENST00000613261 223 ntBASIC0.14□□□□□ -2.39
CLCF1Q9UBD9 MIR6082-201ENST00000613604 109 ntBASIC0.14□□□□□ -2.39
CLCF1Q9UBD9 AC078938.1-201ENST00000620993 318 ntBASIC0.14□□□□□ -2.39
CLCF1Q9UBD9 AC021613.1-201ENST00000623880 111 ntBASIC0.14□□□□□ -2.39
CLCF1Q9UBD9 MIR6841-201ENST00000637129 72 ntBASIC0.14□□□□□ -2.39
CLCF1Q9UBD9 Y_RNA.11-201ENST00000362375 109 ntBASIC0.13□□□□□ -2.39
CLCF1Q9UBD9 Y_RNA.515-201ENST00000384535 112 ntBASIC0.13□□□□□ -2.39
CLCF1Q9UBD9 Y_RNA.518-201ENST00000384552 113 ntBASIC0.13□□□□□ -2.39
CLCF1Q9UBD9 MIR644A-201ENST00000385262 94 ntBASIC0.13□□□□□ -2.39
CLCF1Q9UBD9 MT-TW-201ENST00000387382 68 ntBASIC0.13□□□□□ -2.39
CLCF1Q9UBD9 MIR1197-201ENST00000408818 88 ntBASIC0.13□□□□□ -2.39
CLCF1Q9UBD9 Y_RNA.617-201ENST00000410920 90 ntBASIC0.13□□□□□ -2.39
CLCF1Q9UBD9 RNU6-135P-201ENST00000516769 101 ntBASIC0.13□□□□□ -2.39
CLCF1Q9UBD9 RNU6-765P-201ENST00000516916 99 ntBASIC0.13□□□□□ -2.39
CLCF1Q9UBD9 Y_RNA.720-201ENST00000517166 92 ntBASIC0.13□□□□□ -2.39
CLCF1Q9UBD9 MIR378D2-201ENST00000580636 98 ntBASIC0.13□□□□□ -2.39
CLCF1Q9UBD9 MIR4744-201ENST00000581563 82 ntBASIC0.13□□□□□ -2.39
CLCF1Q9UBD9 RNA5SP457-201ENST00000363657 124 ntBASIC0.12□□□□□ -2.39
CLCF1Q9UBD9 RNU6-949P-201ENST00000384040 107 ntBASIC0.12□□□□□ -2.39
CLCF1Q9UBD9 RNA5SP299-201ENST00000391203 116 ntBASIC0.12□□□□□ -2.39
CLCF1Q9UBD9 RNU2-59P-201ENST00000410482 191 ntBASIC0.12□□□□□ -2.39
CLCF1Q9UBD9 RNA5SP127-201ENST00000411051 133 ntBASIC0.12□□□□□ -2.39
CLCF1Q9UBD9 RNU5E-9P-201ENST00000411164 104 ntBASIC0.12□□□□□ -2.39
CLCF1Q9UBD9 AC073261.1-201ENST00000429409 121 ntBASIC0.12□□□□□ -2.39
CLCF1Q9UBD9 MTATP8P1-201ENST00000467115 207 ntBASIC0.12□□□□□ -2.39
CLCF1Q9UBD9 MIR4431-201ENST00000579990 94 ntBASIC0.12□□□□□ -2.39
CLCF1Q9UBD9 MIR4491-201ENST00000581087 68 ntBASIC0.12□□□□□ -2.39
CLCF1Q9UBD9 AC006504.6-201ENST00000590142 199 ntBASIC0.12□□□□□ -2.39
CLCF1Q9UBD9 Y_RNA.115-201ENST00000363272 98 ntBASIC0.11□□□□□ -2.39
CLCF1Q9UBD9 SNORA36.1-201ENST00000363424 132 ntBASIC0.11□□□□□ -2.39
CLCF1Q9UBD9 Y_RNA.574-201ENST00000384766 95 ntBASIC0.11□□□□□ -2.39
CLCF1Q9UBD9 Y_RNA.588-201ENST00000391254 102 ntBASIC0.11□□□□□ -2.39
CLCF1Q9UBD9 RNU6-1153P-201ENST00000516760 105 ntBASIC0.11□□□□□ -2.39
CLCF1Q9UBD9 RNA5SP268-201ENST00000516828 124 ntBASIC0.11□□□□□ -2.39
CLCF1Q9UBD9 MIR4315-1-201ENST00000636800 73 ntBASIC0.11□□□□□ -2.39
CLCF1Q9UBD9 MIR4315-2-201ENST00000640925 73 ntBASIC0.11□□□□□ -2.39
CLCF1Q9UBD9 Y_RNA.54-201ENST00000362766 105 ntBASIC0.1□□□□□ -2.39
CLCF1Q9UBD9 RNU6-978P-201ENST00000364371 103 ntBASIC0.1□□□□□ -2.39
CLCF1Q9UBD9 Y_RNA.292-201ENST00000364904 97 ntBASIC0.1□□□□□ -2.39
CLCF1Q9UBD9 SNORA18-201ENST00000384416 132 ntBASIC0.1□□□□□ -2.39
CLCF1Q9UBD9 SNORA72.6-201ENST00000384520 129 ntBASIC0.1□□□□□ -2.39
CLCF1Q9UBD9 MIR624-201ENST00000385217 97 ntBASIC0.1□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 178.8 ms