Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 MIR4514-201ENST00000581410 57 ntBASIC0.19□□□□□ -2.38
CLCF1Q9UBD9 MIR5093-201ENST00000583199 100 ntBASIC0.19□□□□□ -2.38
CLCF1Q9UBD9 AL365205.2-201ENST00000594586 68 ntBASIC0.19□□□□□ -2.38
CLCF1Q9UBD9 MIR376A2-201ENST00000636782 80 ntBASIC0.19□□□□□ -2.38
CLCF1Q9UBD9 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.19□□□□□ -2.38
CLCF1Q9UBD9 SNORD118-201ENST00000363593 134 ntBASIC0.18□□□□□ -2.38
CLCF1Q9UBD9 RNU6-103P-201ENST00000363686 107 ntBASIC0.18□□□□□ -2.38
CLCF1Q9UBD9 Y_RNA.176-201ENST00000363815 109 ntBASIC0.18□□□□□ -2.38
CLCF1Q9UBD9 RNU6-1227P-201ENST00000383981 107 ntBASIC0.18□□□□□ -2.38
CLCF1Q9UBD9 Y_RNA.422-201ENST00000384054 114 ntBASIC0.18□□□□□ -2.38
CLCF1Q9UBD9 SNORA8.2-201ENST00000384372 139 ntBASIC0.18□□□□□ -2.38
CLCF1Q9UBD9 Y_RNA.567-201ENST00000384736 106 ntBASIC0.18□□□□□ -2.38
CLCF1Q9UBD9 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.18□□□□□ -2.38
CLCF1Q9UBD9 SNRPGP12-201ENST00000449481 213 ntBASIC0.18□□□□□ -2.38
CLCF1Q9UBD9 RNU6-635P-201ENST00000516651 102 ntBASIC0.18□□□□□ -2.38
CLCF1Q9UBD9 AL442663.2-201ENST00000554385 511 ntBASIC0.18□□□□□ -2.38
CLCF1Q9UBD9 SNORA25.18-201ENST00000607153 114 ntBASIC0.18□□□□□ -2.38
CLCF1Q9UBD9 Y_RNA.42-201ENST00000362660 108 ntBASIC0.17□□□□□ -2.38
CLCF1Q9UBD9 Y_RNA.262-201ENST00000364641 102 ntBASIC0.17□□□□□ -2.38
CLCF1Q9UBD9 Y_RNA.416-201ENST00000384014 113 ntBASIC0.17□□□□□ -2.38
CLCF1Q9UBD9 RNU4-43P-201ENST00000410628 137 ntBASIC0.17□□□□□ -2.38
CLCF1Q9UBD9 RNU6-863P-201ENST00000515989 104 ntBASIC0.17□□□□□ -2.38
CLCF1Q9UBD9 MIR8066-201ENST00000617280 78 ntBASIC0.17□□□□□ -2.38
CLCF1Q9UBD9 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
CLCF1Q9UBD9 RNU6-403P-201ENST00000363163 104 ntBASIC0.16□□□□□ -2.38
CLCF1Q9UBD9 RNA5SP62-201ENST00000363457 110 ntBASIC0.16□□□□□ -2.38
CLCF1Q9UBD9 RNU6-1099P-201ENST00000363533 107 ntBASIC0.16□□□□□ -2.38
CLCF1Q9UBD9 RNU4-67P-201ENST00000364569 141 ntBASIC0.16□□□□□ -2.38
CLCF1Q9UBD9 Y_RNA.512-201ENST00000384518 102 ntBASIC0.16□□□□□ -2.38
CLCF1Q9UBD9 MIR1295A-201ENST00000408463 79 ntBASIC0.16□□□□□ -2.38
CLCF1Q9UBD9 Y_RNA.604-201ENST00000410574 102 ntBASIC0.16□□□□□ -2.38
CLCF1Q9UBD9 SEPT7P4-201ENST00000437076 306 ntBASIC0.16□□□□□ -2.38
CLCF1Q9UBD9 RNU6-561P-201ENST00000516222 102 ntBASIC0.16□□□□□ -2.38
CLCF1Q9UBD9 AC133485.4-201ENST00000561835 220 ntBASIC0.16□□□□□ -2.38
CLCF1Q9UBD9 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.16□□□□□ -2.38
CLCF1Q9UBD9 MIR8062-201ENST00000621515 85 ntBASIC0.16□□□□□ -2.38
CLCF1Q9UBD9 RNU6-349P-201ENST00000362402 107 ntBASIC0.15□□□□□ -2.39
CLCF1Q9UBD9 RNU6-238P-201ENST00000363313 106 ntBASIC0.15□□□□□ -2.39
CLCF1Q9UBD9 RNU6-815P-201ENST00000384080 113 ntBASIC0.15□□□□□ -2.39
CLCF1Q9UBD9 Y_RNA.461-201ENST00000384263 103 ntBASIC0.15□□□□□ -2.39
CLCF1Q9UBD9 SNORD116-25-201ENST00000516517 92 ntBASIC0.15□□□□□ -2.39
CLCF1Q9UBD9 SNORA62.5-201ENST00000516634 120 ntBASIC0.15□□□□□ -2.39
CLCF1Q9UBD9 AC141846.1-201ENST00000568348 142 ntBASIC0.15□□□□□ -2.39
CLCF1Q9UBD9 MIR6718-201ENST00000616153 80 ntBASIC0.15□□□□□ -2.39
CLCF1Q9UBD9 Y_RNA.13-201ENST00000362403 112 ntBASIC0.14□□□□□ -2.39
CLCF1Q9UBD9 SNORA22.1-201ENST00000362701 134 ntBASIC0.14□□□□□ -2.39
CLCF1Q9UBD9 RNA5SP325-201ENST00000363756 130 ntBASIC0.14□□□□□ -2.39
CLCF1Q9UBD9 Y_RNA.174-201ENST00000363781 105 ntBASIC0.14□□□□□ -2.39
CLCF1Q9UBD9 Y_RNA.352-201ENST00000365439 102 ntBASIC0.14□□□□□ -2.39
CLCF1Q9UBD9 RNU6-597P-201ENST00000365620 102 ntBASIC0.14□□□□□ -2.39
CLCF1Q9UBD9 RNU6-716P-201ENST00000365621 103 ntBASIC0.14□□□□□ -2.39
CLCF1Q9UBD9 Y_RNA.483-201ENST00000384380 101 ntBASIC0.14□□□□□ -2.39
CLCF1Q9UBD9 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.14□□□□□ -2.39
CLCF1Q9UBD9 U8.15-201ENST00000390947 134 ntBASIC0.14□□□□□ -2.39
CLCF1Q9UBD9 AL512326.2-201ENST00000426359 151 ntBASIC0.14□□□□□ -2.39
CLCF1Q9UBD9 AL121914.1-201ENST00000450188 156 ntBASIC0.14□□□□□ -2.39
CLCF1Q9UBD9 RNU6-893P-201ENST00000458841 100 ntBASIC0.14□□□□□ -2.39
CLCF1Q9UBD9 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.14□□□□□ -2.39
CLCF1Q9UBD9 AL442067.1-201ENST00000613261 223 ntBASIC0.14□□□□□ -2.39
CLCF1Q9UBD9 MIR6082-201ENST00000613604 109 ntBASIC0.14□□□□□ -2.39
CLCF1Q9UBD9 AC078938.1-201ENST00000620993 318 ntBASIC0.14□□□□□ -2.39
CLCF1Q9UBD9 AC021613.1-201ENST00000623880 111 ntBASIC0.14□□□□□ -2.39
CLCF1Q9UBD9 MIR6841-201ENST00000637129 72 ntBASIC0.14□□□□□ -2.39
CLCF1Q9UBD9 Y_RNA.11-201ENST00000362375 109 ntBASIC0.13□□□□□ -2.39
CLCF1Q9UBD9 Y_RNA.515-201ENST00000384535 112 ntBASIC0.13□□□□□ -2.39
CLCF1Q9UBD9 Y_RNA.518-201ENST00000384552 113 ntBASIC0.13□□□□□ -2.39
CLCF1Q9UBD9 MIR644A-201ENST00000385262 94 ntBASIC0.13□□□□□ -2.39
CLCF1Q9UBD9 MT-TW-201ENST00000387382 68 ntBASIC0.13□□□□□ -2.39
CLCF1Q9UBD9 MIR1197-201ENST00000408818 88 ntBASIC0.13□□□□□ -2.39
CLCF1Q9UBD9 Y_RNA.617-201ENST00000410920 90 ntBASIC0.13□□□□□ -2.39
CLCF1Q9UBD9 RNU6-135P-201ENST00000516769 101 ntBASIC0.13□□□□□ -2.39
CLCF1Q9UBD9 RNU6-765P-201ENST00000516916 99 ntBASIC0.13□□□□□ -2.39
CLCF1Q9UBD9 Y_RNA.720-201ENST00000517166 92 ntBASIC0.13□□□□□ -2.39
CLCF1Q9UBD9 MIR378D2-201ENST00000580636 98 ntBASIC0.13□□□□□ -2.39
CLCF1Q9UBD9 MIR4744-201ENST00000581563 82 ntBASIC0.13□□□□□ -2.39
CLCF1Q9UBD9 RNA5SP457-201ENST00000363657 124 ntBASIC0.12□□□□□ -2.39
CLCF1Q9UBD9 RNU6-949P-201ENST00000384040 107 ntBASIC0.12□□□□□ -2.39
CLCF1Q9UBD9 RNA5SP299-201ENST00000391203 116 ntBASIC0.12□□□□□ -2.39
CLCF1Q9UBD9 RNU2-59P-201ENST00000410482 191 ntBASIC0.12□□□□□ -2.39
CLCF1Q9UBD9 RNA5SP127-201ENST00000411051 133 ntBASIC0.12□□□□□ -2.39
CLCF1Q9UBD9 RNU5E-9P-201ENST00000411164 104 ntBASIC0.12□□□□□ -2.39
CLCF1Q9UBD9 AC073261.1-201ENST00000429409 121 ntBASIC0.12□□□□□ -2.39
CLCF1Q9UBD9 MTATP8P1-201ENST00000467115 207 ntBASIC0.12□□□□□ -2.39
CLCF1Q9UBD9 MIR4431-201ENST00000579990 94 ntBASIC0.12□□□□□ -2.39
CLCF1Q9UBD9 MIR4491-201ENST00000581087 68 ntBASIC0.12□□□□□ -2.39
CLCF1Q9UBD9 AC006504.6-201ENST00000590142 199 ntBASIC0.12□□□□□ -2.39
CLCF1Q9UBD9 Y_RNA.115-201ENST00000363272 98 ntBASIC0.11□□□□□ -2.39
CLCF1Q9UBD9 SNORA36.1-201ENST00000363424 132 ntBASIC0.11□□□□□ -2.39
CLCF1Q9UBD9 Y_RNA.574-201ENST00000384766 95 ntBASIC0.11□□□□□ -2.39
CLCF1Q9UBD9 Y_RNA.588-201ENST00000391254 102 ntBASIC0.11□□□□□ -2.39
CLCF1Q9UBD9 RNU6-1153P-201ENST00000516760 105 ntBASIC0.11□□□□□ -2.39
CLCF1Q9UBD9 RNA5SP268-201ENST00000516828 124 ntBASIC0.11□□□□□ -2.39
CLCF1Q9UBD9 MIR4315-1-201ENST00000636800 73 ntBASIC0.11□□□□□ -2.39
CLCF1Q9UBD9 MIR4315-2-201ENST00000640925 73 ntBASIC0.11□□□□□ -2.39
CLCF1Q9UBD9 Y_RNA.54-201ENST00000362766 105 ntBASIC0.1□□□□□ -2.39
CLCF1Q9UBD9 RNU6-978P-201ENST00000364371 103 ntBASIC0.1□□□□□ -2.39
CLCF1Q9UBD9 Y_RNA.292-201ENST00000364904 97 ntBASIC0.1□□□□□ -2.39
CLCF1Q9UBD9 SNORA18-201ENST00000384416 132 ntBASIC0.1□□□□□ -2.39
CLCF1Q9UBD9 SNORA72.6-201ENST00000384520 129 ntBASIC0.1□□□□□ -2.39
CLCF1Q9UBD9 MIR624-201ENST00000385217 97 ntBASIC0.1□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 184.8 ms