Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 AL162730.1-201ENST00000605734 292 ntBASIC0.51□□□□□ -2.33
CPSF2Q9P2I0 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.51□□□□□ -2.33
CPSF2Q9P2I0 Y_RNA.65-201ENST00000362846 100 ntBASIC0.5□□□□□ -2.33
CPSF2Q9P2I0 RNU6-643P-201ENST00000384018 107 ntBASIC0.5□□□□□ -2.33
CPSF2Q9P2I0 SNORA20-201ENST00000384662 132 ntBASIC0.5□□□□□ -2.33
CPSF2Q9P2I0 Y_RNA.571-201ENST00000384753 98 ntBASIC0.5□□□□□ -2.33
CPSF2Q9P2I0 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.5□□□□□ -2.33
CPSF2Q9P2I0 RNA5SP127-201ENST00000411051 133 ntBASIC0.5□□□□□ -2.33
CPSF2Q9P2I0 Y_RNA.626-201ENST00000411288 95 ntBASIC0.5□□□□□ -2.33
CPSF2Q9P2I0 Y_RNA.673-201ENST00000516306 88 ntBASIC0.5□□□□□ -2.33
CPSF2Q9P2I0 SCARNA15-202ENST00000516881 127 ntBASIC0.5□□□□□ -2.33
CPSF2Q9P2I0 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
CPSF2Q9P2I0 MIR3152-201ENST00000579801 74 ntBASIC0.5□□□□□ -2.33
CPSF2Q9P2I0 RNA5SP499-201ENST00000363982 119 ntBASIC0.49□□□□□ -2.33
CPSF2Q9P2I0 RNU1-133P-201ENST00000364867 167 ntBASIC0.49□□□□□ -2.33
CPSF2Q9P2I0 Y_RNA.350-201ENST00000365409 98 ntBASIC0.49□□□□□ -2.33
CPSF2Q9P2I0 Y_RNA.508-201ENST00000384502 114 ntBASIC0.49□□□□□ -2.33
CPSF2Q9P2I0 RNA5SP237-201ENST00000410414 113 ntBASIC0.49□□□□□ -2.33
CPSF2Q9P2I0 AC002350.1-201ENST00000490759 375 ntBASIC0.49□□□□□ -2.33
CPSF2Q9P2I0 SNORA68.3-201ENST00000515906 83 ntBASIC0.49□□□□□ -2.33
CPSF2Q9P2I0 SCARNA15.1-201ENST00000516384 125 ntBASIC0.49□□□□□ -2.33
CPSF2Q9P2I0 RNU7-70P-201ENST00000516941 66 ntBASIC0.49□□□□□ -2.33
CPSF2Q9P2I0 AC021613.1-201ENST00000623880 111 ntBASIC0.49□□□□□ -2.33
CPSF2Q9P2I0 SNORA22.1-201ENST00000362701 134 ntBASIC0.48□□□□□ -2.33
CPSF2Q9P2I0 Y_RNA.182-201ENST00000363880 111 ntBASIC0.48□□□□□ -2.33
CPSF2Q9P2I0 MIR624-201ENST00000385217 97 ntBASIC0.48□□□□□ -2.33
CPSF2Q9P2I0 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.48□□□□□ -2.33
CPSF2Q9P2I0 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.48□□□□□ -2.33
CPSF2Q9P2I0 RNU6-1149P-201ENST00000516810 97 ntBASIC0.48□□□□□ -2.33
CPSF2Q9P2I0 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
CPSF2Q9P2I0 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.47□□□□□ -2.33
CPSF2Q9P2I0 SNORD93-201ENST00000408813 74 ntBASIC0.47□□□□□ -2.33
CPSF2Q9P2I0 MIR5087-201ENST00000635826 76 ntBASIC0.47□□□□□ -2.33
CPSF2Q9P2I0 Y_RNA.42-201ENST00000362660 108 ntBASIC0.46□□□□□ -2.34
CPSF2Q9P2I0 RNU6-275P-201ENST00000364910 107 ntBASIC0.46□□□□□ -2.34
CPSF2Q9P2I0 SNORA50A-201ENST00000384225 134 ntBASIC0.46□□□□□ -2.34
CPSF2Q9P2I0 Y_RNA.478-201ENST00000384358 107 ntBASIC0.46□□□□□ -2.34
CPSF2Q9P2I0 RNU6-342P-201ENST00000384521 104 ntBASIC0.46□□□□□ -2.34
CPSF2Q9P2I0 RNU4-70P-201ENST00000384579 139 ntBASIC0.46□□□□□ -2.34
CPSF2Q9P2I0 RNU4-83P-201ENST00000410863 133 ntBASIC0.46□□□□□ -2.34
CPSF2Q9P2I0 RPL39P25-201ENST00000449384 154 ntBASIC0.46□□□□□ -2.34
CPSF2Q9P2I0 RNU6-1045P-201ENST00000516321 107 ntBASIC0.46□□□□□ -2.34
CPSF2Q9P2I0 Y_RNA.680-201ENST00000516441 93 ntBASIC0.46□□□□□ -2.34
CPSF2Q9P2I0 RNU6-448P-201ENST00000517052 107 ntBASIC0.46□□□□□ -2.34
CPSF2Q9P2I0 AC141846.1-201ENST00000568348 142 ntBASIC0.46□□□□□ -2.34
CPSF2Q9P2I0 MIR3128-201ENST00000581957 66 ntBASIC0.46□□□□□ -2.34
CPSF2Q9P2I0 AC062037.2-201ENST00000610137 73 ntBASIC0.46□□□□□ -2.34
CPSF2Q9P2I0 MIR8066-201ENST00000617280 78 ntBASIC0.46□□□□□ -2.34
CPSF2Q9P2I0 AC092634.7-201ENST00000621022 103 ntBASIC0.46□□□□□ -2.34
CPSF2Q9P2I0 Y_RNA.60-201ENST00000362831 98 ntBASIC0.45□□□□□ -2.34
CPSF2Q9P2I0 Y_RNA.162-201ENST00000363683 102 ntBASIC0.45□□□□□ -2.34
CPSF2Q9P2I0 RNU4-16P-201ENST00000364737 141 ntBASIC0.45□□□□□ -2.34
CPSF2Q9P2I0 Y_RNA.355-201ENST00000365462 98 ntBASIC0.45□□□□□ -2.34
CPSF2Q9P2I0 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.45□□□□□ -2.34
CPSF2Q9P2I0 AL118496.2-201ENST00000448300 230 ntBASIC0.45□□□□□ -2.34
CPSF2Q9P2I0 RNU4-71P-201ENST00000516258 113 ntBASIC0.45□□□□□ -2.34
CPSF2Q9P2I0 RNU6-229P-201ENST00000516614 102 ntBASIC0.45□□□□□ -2.34
CPSF2Q9P2I0 AC022709.1-201ENST00000615967 87 ntBASIC0.45□□□□□ -2.34
CPSF2Q9P2I0 MIR6513-201ENST00000621188 64 ntBASIC0.45□□□□□ -2.34
CPSF2Q9P2I0 Y_RNA.412-201ENST00000384001 104 ntBASIC0.44□□□□□ -2.34
CPSF2Q9P2I0 U8.15-201ENST00000390947 134 ntBASIC0.44□□□□□ -2.34
CPSF2Q9P2I0 RNU6-679P-201ENST00000391003 106 ntBASIC0.44□□□□□ -2.34
CPSF2Q9P2I0 AC114737.2-201ENST00000421583 173 ntBASIC0.44□□□□□ -2.34
CPSF2Q9P2I0 RNA5SP94-201ENST00000516917 108 ntBASIC0.44□□□□□ -2.34
CPSF2Q9P2I0 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.43□□□□□ -2.34
CPSF2Q9P2I0 MIRLET7D-201ENST00000362263 87 ntBASIC0.43□□□□□ -2.34
CPSF2Q9P2I0 AC098934.3-201ENST00000430450 190 ntBASIC0.43□□□□□ -2.34
CPSF2Q9P2I0 AC092628.1-201ENST00000436250 252 ntBASIC0.43□□□□□ -2.34
CPSF2Q9P2I0 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.43□□□□□ -2.34
CPSF2Q9P2I0 RNU6-1023P-201ENST00000516137 106 ntBASIC0.43□□□□□ -2.34
CPSF2Q9P2I0 MRPS18CP4-201ENST00000535821 231 ntBASIC0.43□□□□□ -2.34
CPSF2Q9P2I0 MIR6515-201ENST00000619843 57 ntBASIC0.43□□□□□ -2.34
CPSF2Q9P2I0 SNORA25.7-201ENST00000364375 127 ntBASIC0.42□□□□□ -2.34
CPSF2Q9P2I0 RNA5SP517-201ENST00000364724 117 ntBASIC0.42□□□□□ -2.34
CPSF2Q9P2I0 AP003327.1-201ENST00000529684 127 ntBASIC0.42□□□□□ -2.34
CPSF2Q9P2I0 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.42□□□□□ -2.34
CPSF2Q9P2I0 U4.1-201ENST00000620349 87 ntBASIC0.42□□□□□ -2.34
CPSF2Q9P2I0 U6.106-201ENST00000636360 105 ntBASIC0.42□□□□□ -2.34
CPSF2Q9P2I0 MTND5P32-201ENST00000560711 1802 ntBASIC0.42□□□□□ -2.34
CPSF2Q9P2I0 Y_RNA.75-201ENST00000362927 97 ntBASIC0.41□□□□□ -2.34
CPSF2Q9P2I0 RNY1-201ENST00000364228 113 ntBASIC0.41□□□□□ -2.34
CPSF2Q9P2I0 RNA5SP117-201ENST00000365294 118 ntBASIC0.41□□□□□ -2.34
CPSF2Q9P2I0 RNU6-1336P-201ENST00000383886 109 ntBASIC0.41□□□□□ -2.34
CPSF2Q9P2I0 SNORA18-201ENST00000384416 132 ntBASIC0.41□□□□□ -2.34
CPSF2Q9P2I0 MIR598-201ENST00000384868 97 ntBASIC0.41□□□□□ -2.34
CPSF2Q9P2I0 Y_RNA.588-201ENST00000391254 102 ntBASIC0.41□□□□□ -2.34
CPSF2Q9P2I0 Y_RNA.617-201ENST00000410920 90 ntBASIC0.41□□□□□ -2.34
CPSF2Q9P2I0 AC096949.1-201ENST00000412047 152 ntBASIC0.41□□□□□ -2.34
CPSF2Q9P2I0 MTND3P2-201ENST00000438452 342 ntBASIC0.41□□□□□ -2.34
CPSF2Q9P2I0 RNU6-111P-201ENST00000517179 105 ntBASIC0.41□□□□□ -2.34
CPSF2Q9P2I0 Y_RNA.13-201ENST00000362403 112 ntBASIC0.4□□□□□ -2.35
CPSF2Q9P2I0 RNU6-949P-201ENST00000384040 107 ntBASIC0.4□□□□□ -2.35
CPSF2Q9P2I0 RNU6-918P-201ENST00000391219 106 ntBASIC0.4□□□□□ -2.35
CPSF2Q9P2I0 AC133485.4-201ENST00000561835 220 ntBASIC0.4□□□□□ -2.35
CPSF2Q9P2I0 MIR3678-201ENST00000578455 94 ntBASIC0.4□□□□□ -2.35
CPSF2Q9P2I0 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.4□□□□□ -2.35
CPSF2Q9P2I0 RNU6-403P-201ENST00000363163 104 ntBASIC0.39□□□□□ -2.35
CPSF2Q9P2I0 RNU6-702P-201ENST00000364982 107 ntBASIC0.39□□□□□ -2.35
CPSF2Q9P2I0 Y_RNA.447-201ENST00000384184 113 ntBASIC0.39□□□□□ -2.35
CPSF2Q9P2I0 RNY1P6-201ENST00000384193 109 ntBASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 223.8 ms