Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 SNORA22-201ENST00000383907 134 ntBASIC0.92□□□□□ -2.26
HINT3Q9NQE9 Y_RNA.400-201ENST00000383963 111 ntBASIC0.92□□□□□ -2.26
HINT3Q9NQE9 SNORA22C-201ENST00000384614 134 ntBASIC0.92□□□□□ -2.26
HINT3Q9NQE9 MIR513C-201ENST00000401352 84 ntBASIC0.92□□□□□ -2.26
HINT3Q9NQE9 RNU6-1165P-201ENST00000410119 107 ntBASIC0.92□□□□□ -2.26
HINT3Q9NQE9 POLR2J4-204ENST00000418424 324 ntBASIC0.92□□□□□ -2.26
HINT3Q9NQE9 PDCD5P2-201ENST00000507570 312 ntBASIC0.92□□□□□ -2.26
HINT3Q9NQE9 AC010332.2-201ENST00000613083 1904 ntBASIC0.91□□□□□ -2.26
HINT3Q9NQE9 RNU6-508P-201ENST00000363231 103 ntBASIC0.91□□□□□ -2.26
HINT3Q9NQE9 RNU6-690P-201ENST00000365242 106 ntBASIC0.91□□□□□ -2.26
HINT3Q9NQE9 MIR563-201ENST00000385080 79 ntBASIC0.91□□□□□ -2.26
HINT3Q9NQE9 AL603914.1-201ENST00000401964 204 ntBASIC0.91□□□□□ -2.26
HINT3Q9NQE9 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.91□□□□□ -2.26
HINT3Q9NQE9 RNA5SP144-201ENST00000410846 116 ntBASIC0.91□□□□□ -2.26
HINT3Q9NQE9 SNORD83.1-201ENST00000411362 77 ntBASIC0.91□□□□□ -2.26
HINT3Q9NQE9 U7.7-201ENST00000459276 60 ntBASIC0.91□□□□□ -2.26
HINT3Q9NQE9 UBL5P1-201ENST00000507979 193 ntBASIC0.91□□□□□ -2.26
HINT3Q9NQE9 RNA5SP255-201ENST00000516370 107 ntBASIC0.91□□□□□ -2.26
HINT3Q9NQE9 Y_RNA.690-201ENST00000516603 95 ntBASIC0.91□□□□□ -2.26
HINT3Q9NQE9 Y_RNA.757-201ENST00000578934 114 ntBASIC0.91□□□□□ -2.26
HINT3Q9NQE9 MIR8070-201ENST00000616510 88 ntBASIC0.91□□□□□ -2.26
HINT3Q9NQE9 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.9□□□□□ -2.26
HINT3Q9NQE9 Y_RNA.170-201ENST00000363746 110 ntBASIC0.9□□□□□ -2.27
HINT3Q9NQE9 RNU6-309P-201ENST00000364573 106 ntBASIC0.9□□□□□ -2.27
HINT3Q9NQE9 SNORA25.9-201ENST00000365087 128 ntBASIC0.9□□□□□ -2.27
HINT3Q9NQE9 SNORD89-201ENST00000390981 114 ntBASIC0.9□□□□□ -2.27
HINT3Q9NQE9 RNU6-460P-201ENST00000391158 108 ntBASIC0.9□□□□□ -2.27
HINT3Q9NQE9 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.9□□□□□ -2.27
HINT3Q9NQE9 MIR1827-201ENST00000408549 66 ntBASIC0.9□□□□□ -2.27
HINT3Q9NQE9 MIR18B-201ENST00000454574 71 ntBASIC0.9□□□□□ -2.27
HINT3Q9NQE9 Y_RNA.651-201ENST00000459380 103 ntBASIC0.9□□□□□ -2.27
HINT3Q9NQE9 SNORA25.12-201ENST00000516202 82 ntBASIC0.9□□□□□ -2.27
HINT3Q9NQE9 RNU6-1110P-201ENST00000516462 101 ntBASIC0.9□□□□□ -2.27
HINT3Q9NQE9 RNA5SP102-201ENST00000516865 106 ntBASIC0.9□□□□□ -2.27
HINT3Q9NQE9 RNU6-1212P-201ENST00000517023 104 ntBASIC0.9□□□□□ -2.27
HINT3Q9NQE9 MIR548X2-201ENST00000579776 100 ntBASIC0.9□□□□□ -2.27
HINT3Q9NQE9 MIR4661-201ENST00000582720 75 ntBASIC0.9□□□□□ -2.27
HINT3Q9NQE9 MIR1-1-201ENST00000362147 71 ntBASIC0.89□□□□□ -2.27
HINT3Q9NQE9 Y_RNA.215-201ENST00000364204 112 ntBASIC0.89□□□□□ -2.27
HINT3Q9NQE9 RNU4-38P-201ENST00000364472 129 ntBASIC0.89□□□□□ -2.27
HINT3Q9NQE9 RNU6-209P-201ENST00000384118 107 ntBASIC0.89□□□□□ -2.27
HINT3Q9NQE9 MIR548I1-201ENST00000408810 149 ntBASIC0.89□□□□□ -2.27
HINT3Q9NQE9 RPS26P5-201ENST00000418544 335 ntBASIC0.89□□□□□ -2.27
HINT3Q9NQE9 RNU6-240P-201ENST00000516098 97 ntBASIC0.89□□□□□ -2.27
HINT3Q9NQE9 RNU6-113P-201ENST00000516653 101 ntBASIC0.89□□□□□ -2.27
HINT3Q9NQE9 RNU6-1258P-201ENST00000516911 111 ntBASIC0.89□□□□□ -2.27
HINT3Q9NQE9 AL136317.1-201ENST00000612653 226 ntBASIC0.89□□□□□ -2.27
HINT3Q9NQE9 MIR30D-201ENST00000362283 70 ntBASIC0.88□□□□□ -2.27
HINT3Q9NQE9 RNU6-369P-201ENST00000362515 102 ntBASIC0.88□□□□□ -2.27
HINT3Q9NQE9 Y_RNA.171-201ENST00000363760 102 ntBASIC0.88□□□□□ -2.27
HINT3Q9NQE9 RNU6-1237P-201ENST00000384777 107 ntBASIC0.88□□□□□ -2.27
HINT3Q9NQE9 MIR569-201ENST00000385228 96 ntBASIC0.88□□□□□ -2.27
HINT3Q9NQE9 MIR100-201ENST00000385259 80 ntBASIC0.88□□□□□ -2.27
HINT3Q9NQE9 MIR1276-201ENST00000408707 83 ntBASIC0.88□□□□□ -2.27
HINT3Q9NQE9 AL022718.1-201ENST00000412004 84 ntBASIC0.88□□□□□ -2.27
HINT3Q9NQE9 AC015818.7-201ENST00000428754 109 ntBASIC0.88□□□□□ -2.27
HINT3Q9NQE9 AC087499.7-201ENST00000441958 109 ntBASIC0.88□□□□□ -2.27
HINT3Q9NQE9 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.88□□□□□ -2.27
HINT3Q9NQE9 AC113410.1-201ENST00000505029 247 ntBASIC0.88□□□□□ -2.27
HINT3Q9NQE9 RNU6-255P-201ENST00000516957 105 ntBASIC0.88□□□□□ -2.27
HINT3Q9NQE9 AC133485.4-201ENST00000561835 220 ntBASIC0.88□□□□□ -2.27
HINT3Q9NQE9 AC138907.4-201ENST00000570107 226 ntBASIC0.88□□□□□ -2.27
HINT3Q9NQE9 MIR4771-2-201ENST00000577758 74 ntBASIC0.88□□□□□ -2.27
HINT3Q9NQE9 MIR4771-1-201ENST00000582617 74 ntBASIC0.88□□□□□ -2.27
HINT3Q9NQE9 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.88□□□□□ -2.27
HINT3Q9NQE9 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.88□□□□□ -2.27
HINT3Q9NQE9 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
HINT3Q9NQE9 RNU6-915P-201ENST00000364943 103 ntBASIC0.87□□□□□ -2.27
HINT3Q9NQE9 RNU6-1335P-201ENST00000365426 107 ntBASIC0.87□□□□□ -2.27
HINT3Q9NQE9 MT-TF-201ENST00000387314 71 ntBASIC0.87□□□□□ -2.27
HINT3Q9NQE9 MT-TR-201ENST00000387439 65 ntBASIC0.87□□□□□ -2.27
HINT3Q9NQE9 RNA5SP237-201ENST00000410414 113 ntBASIC0.87□□□□□ -2.27
HINT3Q9NQE9 RNU7-200P-201ENST00000516105 62 ntBASIC0.87□□□□□ -2.27
HINT3Q9NQE9 MIR4305-201ENST00000583252 102 ntBASIC0.87□□□□□ -2.27
HINT3Q9NQE9 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.87□□□□□ -2.27
HINT3Q9NQE9 MIR6504-201ENST00000613520 61 ntBASIC0.87□□□□□ -2.27
HINT3Q9NQE9 AL662814.1-201ENST00000617364 121 ntBASIC0.87□□□□□ -2.27
HINT3Q9NQE9 SNORD114-27-201ENST00000363766 70 ntBASIC0.86□□□□□ -2.27
HINT3Q9NQE9 MIR499A-201ENST00000384903 122 ntBASIC0.86□□□□□ -2.27
HINT3Q9NQE9 RNU7-113P-201ENST00000459273 62 ntBASIC0.86□□□□□ -2.27
HINT3Q9NQE9 RNU5E-3P-201ENST00000515913 68 ntBASIC0.86□□□□□ -2.27
HINT3Q9NQE9 AC025627.3-201ENST00000582078 182 ntBASIC0.86□□□□□ -2.27
HINT3Q9NQE9 AC021443.1-201ENST00000604478 211 ntBASIC0.86□□□□□ -2.27
HINT3Q9NQE9 Y_RNA.420-201ENST00000384043 110 ntBASIC0.85□□□□□ -2.27
HINT3Q9NQE9 Y_RNA.488-201ENST00000384403 102 ntBASIC0.85□□□□□ -2.27
HINT3Q9NQE9 SNORA18-201ENST00000384416 132 ntBASIC0.85□□□□□ -2.27
HINT3Q9NQE9 RNU6-342P-201ENST00000384521 104 ntBASIC0.85□□□□□ -2.27
HINT3Q9NQE9 AL512326.2-201ENST00000426359 151 ntBASIC0.85□□□□□ -2.27
HINT3Q9NQE9 RNU6-977P-201ENST00000516411 103 ntBASIC0.85□□□□□ -2.27
HINT3Q9NQE9 RNU2-35P-201ENST00000516446 142 ntBASIC0.85□□□□□ -2.27
HINT3Q9NQE9 AC020891.4-201ENST00000605745 93 ntBASIC0.85□□□□□ -2.27
HINT3Q9NQE9 AP001340.1-201ENST00000624405 217 ntBASIC0.85□□□□□ -2.27
HINT3Q9NQE9 AC023934.1-201ENST00000574529 2389 ntBASIC0.85□□□□□ -2.27
HINT3Q9NQE9 SNORD115-2-201ENST00000362842 82 ntBASIC0.84□□□□□ -2.27
HINT3Q9NQE9 RNU6-1187P-201ENST00000364771 110 ntBASIC0.84□□□□□ -2.27
HINT3Q9NQE9 SNORD115-20-201ENST00000365099 82 ntBASIC0.84□□□□□ -2.27
HINT3Q9NQE9 Y_RNA.366-201ENST00000365540 102 ntBASIC0.84□□□□□ -2.27
HINT3Q9NQE9 Y_RNA.470-201ENST00000384307 117 ntBASIC0.84□□□□□ -2.27
HINT3Q9NQE9 RNU7-185P-201ENST00000459215 60 ntBASIC0.84□□□□□ -2.27
HINT3Q9NQE9 Y_RNA.692-201ENST00000516627 105 ntBASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms