Protein–RNA interactions for Protein: Q9NPR2

SEMA4B, Semaphorin-4B, humanhuman

Predicted RBP Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4BQ9NPR2 RNY4P18-201ENST00000391107 89 ntBASIC1.4□□□□□ -2.19
SEMA4BQ9NPR2 RPS29P23-201ENST00000458635 123 ntBASIC1.4□□□□□ -2.19
SEMA4BQ9NPR2 RNU6-947P-201ENST00000516264 106 ntBASIC1.4□□□□□ -2.19
SEMA4BQ9NPR2 RNU6-589P-201ENST00000516485 107 ntBASIC1.4□□□□□ -2.19
SEMA4BQ9NPR2 Y_RNA.709-201ENST00000516952 92 ntBASIC1.4□□□□□ -2.19
SEMA4BQ9NPR2 SNORA31.24-201ENST00000517232 57 ntBASIC1.4□□□□□ -2.19
SEMA4BQ9NPR2 AC004812.1-201ENST00000540773 146 ntBASIC1.4□□□□□ -2.19
SEMA4BQ9NPR2 MIR8055-201ENST00000610739 97 ntBASIC1.4□□□□□ -2.19
SEMA4BQ9NPR2 MIR6841-201ENST00000637129 72 ntBASIC1.4□□□□□ -2.19
SEMA4BQ9NPR2 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.4□□□□□ -2.19
SEMA4BQ9NPR2 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
SEMA4BQ9NPR2 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
SEMA4BQ9NPR2 Y_RNA.213-201ENST00000364178 111 ntBASIC1.39□□□□□ -2.19
SEMA4BQ9NPR2 RNU6-880P-201ENST00000384526 107 ntBASIC1.39□□□□□ -2.19
SEMA4BQ9NPR2 Y_RNA.531-201ENST00000384589 121 ntBASIC1.39□□□□□ -2.19
SEMA4BQ9NPR2 RNA5SP261-201ENST00000410536 106 ntBASIC1.39□□□□□ -2.19
SEMA4BQ9NPR2 AP1B1P2-201ENST00000416196 106 ntBASIC1.39□□□□□ -2.19
SEMA4BQ9NPR2 AC007012.1-201ENST00000567192 175 ntBASIC1.39□□□□□ -2.19
SEMA4BQ9NPR2 AL161722.3-201ENST00000605789 2983 ntBASIC1.39□□□□□ -2.19
SEMA4BQ9NPR2 SNORA63.4-201ENST00000362763 126 ntBASIC1.38□□□□□ -2.19
SEMA4BQ9NPR2 SNORA1.1-201ENST00000364671 133 ntBASIC1.38□□□□□ -2.19
SEMA4BQ9NPR2 Y_RNA.338-201ENST00000365320 114 ntBASIC1.38□□□□□ -2.19
SEMA4BQ9NPR2 MIR759-201ENST00000390224 91 ntBASIC1.38□□□□□ -2.19
SEMA4BQ9NPR2 RPS3AP1-201ENST00000413190 320 ntBASIC1.38□□□□□ -2.19
SEMA4BQ9NPR2 MTATP6P29-201ENST00000415057 132 ntBASIC1.38□□□□□ -2.19
SEMA4BQ9NPR2 AC090844.1-201ENST00000422019 156 ntBASIC1.38□□□□□ -2.19
SEMA4BQ9NPR2 AC009474.2-201ENST00000451383 136 ntBASIC1.38□□□□□ -2.19
SEMA4BQ9NPR2 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.38□□□□□ -2.19
SEMA4BQ9NPR2 RNU7-95P-201ENST00000459222 64 ntBASIC1.38□□□□□ -2.19
SEMA4BQ9NPR2 RNU7-113P-201ENST00000459273 62 ntBASIC1.38□□□□□ -2.19
SEMA4BQ9NPR2 SNORA22-201ENST00000383907 134 ntBASIC1.37□□□□□ -2.19
SEMA4BQ9NPR2 Y_RNA.430-201ENST00000384081 110 ntBASIC1.37□□□□□ -2.19
SEMA4BQ9NPR2 SNORD26-201ENST00000384147 75 ntBASIC1.37□□□□□ -2.19
SEMA4BQ9NPR2 Y_RNA.470-201ENST00000384307 117 ntBASIC1.37□□□□□ -2.19
SEMA4BQ9NPR2 Y_RNA.549-201ENST00000384657 102 ntBASIC1.37□□□□□ -2.19
SEMA4BQ9NPR2 AC063976.4-201ENST00000421971 163 ntBASIC1.37□□□□□ -2.19
SEMA4BQ9NPR2 RNU6-893P-201ENST00000458841 100 ntBASIC1.37□□□□□ -2.19
SEMA4BQ9NPR2 RNU1-98P-201ENST00000458992 160 ntBASIC1.37□□□□□ -2.19
SEMA4BQ9NPR2 Z97988.1-201ENST00000637697 135 ntBASIC1.37□□□□□ -2.19
SEMA4BQ9NPR2 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.36□□□□□ -2.19
SEMA4BQ9NPR2 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.36□□□□□ -2.19
SEMA4BQ9NPR2 SNORA25.3-201ENST00000363205 127 ntBASIC1.36□□□□□ -2.19
SEMA4BQ9NPR2 RNY4P6-201ENST00000363667 96 ntBASIC1.36□□□□□ -2.19
SEMA4BQ9NPR2 RNA5SP48-201ENST00000363969 126 ntBASIC1.36□□□□□ -2.19
SEMA4BQ9NPR2 snoU13.25-201ENST00000458945 104 ntBASIC1.36□□□□□ -2.19
SEMA4BQ9NPR2 RPS23P4-201ENST00000487908 423 ntBASIC1.36□□□□□ -2.19
SEMA4BQ9NPR2 AC113410.1-201ENST00000505029 247 ntBASIC1.36□□□□□ -2.19
SEMA4BQ9NPR2 RNU7-6P-201ENST00000516845 62 ntBASIC1.36□□□□□ -2.19
SEMA4BQ9NPR2 MIR4498-201ENST00000577599 66 ntBASIC1.36□□□□□ -2.19
SEMA4BQ9NPR2 AL512598.1-201ENST00000610158 273 ntBASIC1.36□□□□□ -2.19
SEMA4BQ9NPR2 AL035470.1-201ENST00000622571 220 ntBASIC1.36□□□□□ -2.19
SEMA4BQ9NPR2 Y_RNA.362-201ENST00000365518 110 ntBASIC1.35□□□□□ -2.19
SEMA4BQ9NPR2 RNU6-602P-201ENST00000411155 105 ntBASIC1.35□□□□□ -2.19
SEMA4BQ9NPR2 RNA5SP33-201ENST00000516687 98 ntBASIC1.35□□□□□ -2.19
SEMA4BQ9NPR2 RNU6-165P-201ENST00000517170 99 ntBASIC1.35□□□□□ -2.19
SEMA4BQ9NPR2 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.35□□□□□ -2.19
SEMA4BQ9NPR2 MIR3163-201ENST00000581592 73 ntBASIC1.35□□□□□ -2.19
SEMA4BQ9NPR2 snoU13.31-201ENST00000607291 104 ntBASIC1.35□□□□□ -2.19
SEMA4BQ9NPR2 SNORA63.5-201ENST00000363548 123 ntBASIC1.34□□□□□ -2.19
SEMA4BQ9NPR2 Y_RNA.344-201ENST00000365381 112 ntBASIC1.34□□□□□ -2.19
SEMA4BQ9NPR2 MIR548D2-201ENST00000384955 97 ntBASIC1.34□□□□□ -2.19
SEMA4BQ9NPR2 SNORD12C-201ENST00000386307 89 ntBASIC1.34□□□□□ -2.19
SEMA4BQ9NPR2 RNU6-1054P-201ENST00000411293 104 ntBASIC1.34□□□□□ -2.19
SEMA4BQ9NPR2 PDCD5P2-201ENST00000507570 312 ntBASIC1.34□□□□□ -2.19
SEMA4BQ9NPR2 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.34□□□□□ -2.19
SEMA4BQ9NPR2 MIR548AE2-201ENST00000583456 67 ntBASIC1.34□□□□□ -2.19
SEMA4BQ9NPR2 MIR7974-201ENST00000615835 79 ntBASIC1.34□□□□□ -2.19
SEMA4BQ9NPR2 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.34□□□□□ -2.19
SEMA4BQ9NPR2 SNORD115-2-201ENST00000362842 82 ntBASIC1.33□□□□□ -2.2
SEMA4BQ9NPR2 Y_RNA.281-201ENST00000364774 94 ntBASIC1.33□□□□□ -2.2
SEMA4BQ9NPR2 SNORD115-20-201ENST00000365099 82 ntBASIC1.33□□□□□ -2.2
SEMA4BQ9NPR2 SNORA32-201ENST00000384072 121 ntBASIC1.33□□□□□ -2.2
SEMA4BQ9NPR2 MIR1302-7-201ENST00000408841 72 ntBASIC1.33□□□□□ -2.2
SEMA4BQ9NPR2 RNU4-69P-201ENST00000410677 143 ntBASIC1.33□□□□□ -2.2
SEMA4BQ9NPR2 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.33□□□□□ -2.2
SEMA4BQ9NPR2 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.33□□□□□ -2.2
SEMA4BQ9NPR2 AC108729.3-201ENST00000513484 108 ntBASIC1.33□□□□□ -2.2
SEMA4BQ9NPR2 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.33□□□□□ -2.2
SEMA4BQ9NPR2 MIR4679-2-201ENST00000578358 77 ntBASIC1.33□□□□□ -2.2
SEMA4BQ9NPR2 PRELID3BP2-201ENST00000605362 201 ntBASIC1.33□□□□□ -2.2
SEMA4BQ9NPR2 Y_RNA.85-201ENST00000363014 111 ntBASIC1.32□□□□□ -2.2
SEMA4BQ9NPR2 SNORD38B-201ENST00000384690 67 ntBASIC1.32□□□□□ -2.2
SEMA4BQ9NPR2 AC245047.7-201ENST00000440265 293 ntBASIC1.32□□□□□ -2.2
SEMA4BQ9NPR2 RNU6-412P-201ENST00000516434 106 ntBASIC1.32□□□□□ -2.2
SEMA4BQ9NPR2 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.32□□□□□ -2.2
SEMA4BQ9NPR2 AC087741.2-201ENST00000619415 172 ntBASIC1.32□□□□□ -2.2
SEMA4BQ9NPR2 SNORD38B-202ENST00000625943 69 ntBASIC1.32□□□□□ -2.2
SEMA4BQ9NPR2 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
SEMA4BQ9NPR2 ZNF209P-201ENST00000593450 2304 ntBASIC1.32□□□□□ -2.2
SEMA4BQ9NPR2 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
SEMA4BQ9NPR2 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
SEMA4BQ9NPR2 AL589743.1-201ENST00000551932 2712 ntBASIC1.31□□□□□ -2.2
SEMA4BQ9NPR2 RNU6-1107P-201ENST00000364817 104 ntBASIC1.31□□□□□ -2.2
SEMA4BQ9NPR2 SNORA25.8-201ENST00000364831 128 ntBASIC1.31□□□□□ -2.2
SEMA4BQ9NPR2 Y_RNA.299-201ENST00000364973 94 ntBASIC1.31□□□□□ -2.2
SEMA4BQ9NPR2 Y_RNA.354-201ENST00000365448 111 ntBASIC1.31□□□□□ -2.2
SEMA4BQ9NPR2 RNU6-342P-201ENST00000384521 104 ntBASIC1.31□□□□□ -2.2
SEMA4BQ9NPR2 MIR1270-201ENST00000459320 83 ntBASIC1.31□□□□□ -2.2
SEMA4BQ9NPR2 AL133373.1-201ENST00000497098 94 ntBASIC1.31□□□□□ -2.2
SEMA4BQ9NPR2 SNORA31.2-201ENST00000516019 134 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 171.6 ms