Protein–RNA interactions for Protein: Q9NPD3

EXOSC4, Exosome complex component RRP41, humanhuman

Known RBP Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4Q9NPD3 SNORA9.1-201ENST00000362412 131 ntBASIC-0.02□□□□□ -2.41
EXOSC4Q9NPD3 Y_RNA.176-201ENST00000363815 109 ntBASIC-0.02□□□□□ -2.41
EXOSC4Q9NPD3 RNU4-16P-201ENST00000364737 141 ntBASIC-0.02□□□□□ -2.41
EXOSC4Q9NPD3 Y_RNA.476-201ENST00000384347 108 ntBASIC-0.02□□□□□ -2.41
EXOSC4Q9NPD3 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.02□□□□□ -2.41
EXOSC4Q9NPD3 Y_RNA.542-201ENST00000384641 111 ntBASIC-0.02□□□□□ -2.41
EXOSC4Q9NPD3 SNORD28-201ENST00000384706 75 ntBASIC-0.02□□□□□ -2.41
EXOSC4Q9NPD3 Y_RNA.590-201ENST00000410140 107 ntBASIC-0.02□□□□□ -2.41
EXOSC4Q9NPD3 RNU7-129P-201ENST00000516128 62 ntBASIC-0.02□□□□□ -2.41
EXOSC4Q9NPD3 SNORA62.5-201ENST00000516634 120 ntBASIC-0.02□□□□□ -2.41
EXOSC4Q9NPD3 RNA5SP47-201ENST00000517230 109 ntBASIC-0.02□□□□□ -2.41
EXOSC4Q9NPD3 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-0.02□□□□□ -2.41
EXOSC4Q9NPD3 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-0.02□□□□□ -2.41
EXOSC4Q9NPD3 MIR4752-201ENST00000579672 72 ntBASIC-0.02□□□□□ -2.41
EXOSC4Q9NPD3 AC023932.2-201ENST00000603176 175 ntBASIC-0.02□□□□□ -2.41
EXOSC4Q9NPD3 MIR6841-201ENST00000637129 72 ntBASIC-0.02□□□□□ -2.41
EXOSC4Q9NPD3 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.02□□□□□ -2.41
EXOSC4Q9NPD3 MTND5P32-201ENST00000560711 1802 ntBASIC-0.03□□□□□ -2.41
EXOSC4Q9NPD3 SNORD114-5-201ENST00000362928 70 ntBASIC-0.03□□□□□ -2.41
EXOSC4Q9NPD3 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.03□□□□□ -2.41
EXOSC4Q9NPD3 RNA5SP245-201ENST00000364239 121 ntBASIC-0.03□□□□□ -2.41
EXOSC4Q9NPD3 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.03□□□□□ -2.41
EXOSC4Q9NPD3 RNY1P13-201ENST00000365030 105 ntBASIC-0.03□□□□□ -2.41
EXOSC4Q9NPD3 RNU6-949P-201ENST00000384040 107 ntBASIC-0.03□□□□□ -2.41
EXOSC4Q9NPD3 MIR643-201ENST00000385267 97 ntBASIC-0.03□□□□□ -2.41
EXOSC4Q9NPD3 RNU6-381P-201ENST00000391259 108 ntBASIC-0.03□□□□□ -2.41
EXOSC4Q9NPD3 TRBVB-201ENST00000477100 408 ntBASIC-0.03□□□□□ -2.41
EXOSC4Q9NPD3 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.03□□□□□ -2.41
EXOSC4Q9NPD3 Y_RNA.679-201ENST00000516416 91 ntBASIC-0.03□□□□□ -2.41
EXOSC4Q9NPD3 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.03□□□□□ -2.41
EXOSC4Q9NPD3 RNU7-70P-201ENST00000516941 66 ntBASIC-0.03□□□□□ -2.41
EXOSC4Q9NPD3 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.03□□□□□ -2.41
EXOSC4Q9NPD3 MIR4667-201ENST00000578933 66 ntBASIC-0.03□□□□□ -2.41
EXOSC4Q9NPD3 AC244669.1-204ENST00000621564 178 ntBASIC-0.03□□□□□ -2.41
EXOSC4Q9NPD3 MIR6828-201ENST00000636181 60 ntBASIC-0.03□□□□□ -2.41
EXOSC4Q9NPD3 Y_RNA.82-201ENST00000363000 102 ntBASIC-0.04□□□□□ -2.42
EXOSC4Q9NPD3 Y_RNA.92-201ENST00000363043 102 ntBASIC-0.04□□□□□ -2.42
EXOSC4Q9NPD3 SNORA42.1-201ENST00000363515 137 ntBASIC-0.04□□□□□ -2.42
EXOSC4Q9NPD3 Y_RNA.235-201ENST00000364412 102 ntBASIC-0.04□□□□□ -2.42
EXOSC4Q9NPD3 Y_RNA.269-201ENST00000364685 89 ntBASIC-0.04□□□□□ -2.42
EXOSC4Q9NPD3 Y_RNA.306-201ENST00000365015 102 ntBASIC-0.04□□□□□ -2.42
EXOSC4Q9NPD3 Y_RNA.312-201ENST00000365089 102 ntBASIC-0.04□□□□□ -2.42
EXOSC4Q9NPD3 Y_RNA.322-201ENST00000365151 102 ntBASIC-0.04□□□□□ -2.42
EXOSC4Q9NPD3 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.04□□□□□ -2.42
EXOSC4Q9NPD3 Y_RNA.535-201ENST00000384612 99 ntBASIC-0.04□□□□□ -2.42
EXOSC4Q9NPD3 RNU6-127P-201ENST00000390897 107 ntBASIC-0.04□□□□□ -2.42
EXOSC4Q9NPD3 Y_RNA.650-201ENST00000459002 102 ntBASIC-0.04□□□□□ -2.42
EXOSC4Q9NPD3 AL117351.2-201ENST00000513571 157 ntBASIC-0.04□□□□□ -2.42
EXOSC4Q9NPD3 RNU6-765P-201ENST00000516916 99 ntBASIC-0.04□□□□□ -2.42
EXOSC4Q9NPD3 Y_RNA.777-201ENST00000516982 102 ntBASIC-0.04□□□□□ -2.42
EXOSC4Q9NPD3 Y_RNA.771-201ENST00000598668 102 ntBASIC-0.04□□□□□ -2.42
EXOSC4Q9NPD3 MIR6718-201ENST00000616153 80 ntBASIC-0.04□□□□□ -2.42
EXOSC4Q9NPD3 Y_RNA.789-201ENST00000622480 102 ntBASIC-0.04□□□□□ -2.42
EXOSC4Q9NPD3 MIR411-201ENST00000362239 96 ntBASIC-0.05□□□□□ -2.42
EXOSC4Q9NPD3 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.05□□□□□ -2.42
EXOSC4Q9NPD3 RNU6-728P-201ENST00000365375 104 ntBASIC-0.05□□□□□ -2.42
EXOSC4Q9NPD3 MIR760-201ENST00000390220 80 ntBASIC-0.05□□□□□ -2.42
EXOSC4Q9NPD3 SNORA79-201ENST00000408376 140 ntBASIC-0.05□□□□□ -2.42
EXOSC4Q9NPD3 RNU6-985P-201ENST00000410182 104 ntBASIC-0.05□□□□□ -2.42
EXOSC4Q9NPD3 MTND4LP11-201ENST00000422184 280 ntBASIC-0.05□□□□□ -2.42
EXOSC4Q9NPD3 RN7SL793P-201ENST00000583259 296 ntBASIC-0.05□□□□□ -2.42
EXOSC4Q9NPD3 AL365205.2-201ENST00000594586 68 ntBASIC-0.05□□□□□ -2.42
EXOSC4Q9NPD3 U2.14-201ENST00000615943 113 ntBASIC-0.05□□□□□ -2.42
EXOSC4Q9NPD3 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.05□□□□□ -2.42
EXOSC4Q9NPD3 MIR499B-201ENST00000636498 73 ntBASIC-0.05□□□□□ -2.42
EXOSC4Q9NPD3 AC091304.10-201ENST00000641554 121 ntBASIC-0.05□□□□□ -2.42
EXOSC4Q9NPD3 Y_RNA.61-201ENST00000362835 102 ntBASIC-0.06□□□□□ -2.42
EXOSC4Q9NPD3 SNORD114-16-201ENST00000363044 70 ntBASIC-0.06□□□□□ -2.42
EXOSC4Q9NPD3 SNORA63.5-201ENST00000363548 123 ntBASIC-0.06□□□□□ -2.42
EXOSC4Q9NPD3 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.06□□□□□ -2.42
EXOSC4Q9NPD3 RNU6-1109P-201ENST00000391187 107 ntBASIC-0.06□□□□□ -2.42
EXOSC4Q9NPD3 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.06□□□□□ -2.42
EXOSC4Q9NPD3 RNU6-531P-201ENST00000516694 104 ntBASIC-0.06□□□□□ -2.42
EXOSC4Q9NPD3 SCARNA15-202ENST00000516881 127 ntBASIC-0.06□□□□□ -2.42
EXOSC4Q9NPD3 DEFB131E-201ENST00000532329 154 ntBASIC-0.06□□□□□ -2.42
EXOSC4Q9NPD3 MIR4643-201ENST00000577473 78 ntBASIC-0.06□□□□□ -2.42
EXOSC4Q9NPD3 PVT1_3.1-201ENST00000620853 95 ntBASIC-0.06□□□□□ -2.42
EXOSC4Q9NPD3 RNA5SP325-201ENST00000363756 130 ntBASIC-0.07□□□□□ -2.42
EXOSC4Q9NPD3 Y_RNA.202-201ENST00000364083 110 ntBASIC-0.07□□□□□ -2.42
EXOSC4Q9NPD3 RNU6-716P-201ENST00000365621 103 ntBASIC-0.07□□□□□ -2.42
EXOSC4Q9NPD3 MIR593-201ENST00000384856 100 ntBASIC-0.07□□□□□ -2.42
EXOSC4Q9NPD3 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.07□□□□□ -2.42
EXOSC4Q9NPD3 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.07□□□□□ -2.42
EXOSC4Q9NPD3 AL121914.1-201ENST00000450188 156 ntBASIC-0.07□□□□□ -2.42
EXOSC4Q9NPD3 RNU7-79P-201ENST00000516082 62 ntBASIC-0.07□□□□□ -2.42
EXOSC4Q9NPD3 RNY3P16-201ENST00000516338 101 ntBASIC-0.07□□□□□ -2.42
EXOSC4Q9NPD3 RNU6-1149P-201ENST00000516810 97 ntBASIC-0.07□□□□□ -2.42
EXOSC4Q9NPD3 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC-0.07□□□□□ -2.42
EXOSC4Q9NPD3 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.07□□□□□ -2.42
EXOSC4Q9NPD3 MIR4282-201ENST00000583613 67 ntBASIC-0.07□□□□□ -2.42
EXOSC4Q9NPD3 MIR4639-201ENST00000584938 69 ntBASIC-0.07□□□□□ -2.42
EXOSC4Q9NPD3 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.08□□□□□ -2.42
EXOSC4Q9NPD3 RNU6-238P-201ENST00000363313 106 ntBASIC-0.08□□□□□ -2.42
EXOSC4Q9NPD3 Y_RNA.355-201ENST00000365462 98 ntBASIC-0.08□□□□□ -2.42
EXOSC4Q9NPD3 Y_RNA.483-201ENST00000384380 101 ntBASIC-0.08□□□□□ -2.42
EXOSC4Q9NPD3 Y_RNA.508-201ENST00000384502 114 ntBASIC-0.08□□□□□ -2.42
EXOSC4Q9NPD3 RNY1P4-201ENST00000384595 115 ntBASIC-0.08□□□□□ -2.42
EXOSC4Q9NPD3 MT-TW-201ENST00000387382 68 ntBASIC-0.08□□□□□ -2.42
EXOSC4Q9NPD3 AL356055.1-201ENST00000602528 446 ntBASIC-0.08□□□□□ -2.42
EXOSC4Q9NPD3 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.08□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms