Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 RNU6-1237P-201ENST00000384777 107 ntBASIC1.04□□□□□ -2.24
PCDH9Q9HC56 AC063976.4-201ENST00000421971 163 ntBASIC1.04□□□□□ -2.24
PCDH9Q9HC56 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.04□□□□□ -2.24
PCDH9Q9HC56 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.04□□□□□ -2.24
PCDH9Q9HC56 RNA5SP404-201ENST00000517118 132 ntBASIC1.04□□□□□ -2.24
PCDH9Q9HC56 AC010332.2-201ENST00000613083 1904 ntBASIC1.04□□□□□ -2.24
PCDH9Q9HC56 SNORA22.1-201ENST00000362701 134 ntBASIC1.03□□□□□ -2.24
PCDH9Q9HC56 RNY1P5-201ENST00000383890 115 ntBASIC1.03□□□□□ -2.24
PCDH9Q9HC56 RNU6-187P-201ENST00000384139 106 ntBASIC1.03□□□□□ -2.24
PCDH9Q9HC56 MIR499A-201ENST00000384903 122 ntBASIC1.03□□□□□ -2.24
PCDH9Q9HC56 SNORD12-201ENST00000391002 90 ntBASIC1.03□□□□□ -2.24
PCDH9Q9HC56 RNU6-613P-201ENST00000410412 108 ntBASIC1.03□□□□□ -2.24
PCDH9Q9HC56 AC133485.4-201ENST00000561835 220 ntBASIC1.03□□□□□ -2.24
PCDH9Q9HC56 AC138907.4-201ENST00000570107 226 ntBASIC1.03□□□□□ -2.24
PCDH9Q9HC56 AC011603.4-201ENST00000611325 277 ntBASIC1.03□□□□□ -2.24
PCDH9Q9HC56 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
PCDH9Q9HC56 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.02□□□□□ -2.25
PCDH9Q9HC56 RNU4-38P-201ENST00000364472 129 ntBASIC1.02□□□□□ -2.25
PCDH9Q9HC56 SNORD113.3-201ENST00000364630 78 ntBASIC1.02□□□□□ -2.25
PCDH9Q9HC56 Y_RNA.354-201ENST00000365448 111 ntBASIC1.02□□□□□ -2.25
PCDH9Q9HC56 SNORA22-201ENST00000383907 134 ntBASIC1.02□□□□□ -2.25
PCDH9Q9HC56 SNORA22C-201ENST00000384614 134 ntBASIC1.02□□□□□ -2.25
PCDH9Q9HC56 MIR19B1-201ENST00000384829 87 ntBASIC1.02□□□□□ -2.25
PCDH9Q9HC56 MIR588-201ENST00000384900 83 ntBASIC1.02□□□□□ -2.25
PCDH9Q9HC56 MIR548M-201ENST00000408260 86 ntBASIC1.02□□□□□ -2.25
PCDH9Q9HC56 Y_RNA.703-201ENST00000516846 111 ntBASIC1.02□□□□□ -2.25
PCDH9Q9HC56 AC036111.3-201ENST00000526389 112 ntBASIC1.02□□□□□ -2.25
PCDH9Q9HC56 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.02□□□□□ -2.25
PCDH9Q9HC56 AC021443.1-201ENST00000604478 211 ntBASIC1.02□□□□□ -2.25
PCDH9Q9HC56 RNU6-94P-201ENST00000607728 107 ntBASIC1.02□□□□□ -2.25
PCDH9Q9HC56 Y_RNA.171-201ENST00000363760 102 ntBASIC1.01□□□□□ -2.25
PCDH9Q9HC56 Y_RNA.366-201ENST00000365540 102 ntBASIC1.01□□□□□ -2.25
PCDH9Q9HC56 RNU6-746P-201ENST00000384112 109 ntBASIC1.01□□□□□ -2.25
PCDH9Q9HC56 Y_RNA.568-201ENST00000384742 113 ntBASIC1.01□□□□□ -2.25
PCDH9Q9HC56 MT-TN-201ENST00000387400 73 ntBASIC1.01□□□□□ -2.25
PCDH9Q9HC56 RNU7-62P-201ENST00000458856 62 ntBASIC1.01□□□□□ -2.25
PCDH9Q9HC56 Y_RNA.757-201ENST00000578934 114 ntBASIC1.01□□□□□ -2.25
PCDH9Q9HC56 MIR3121-201ENST00000579680 77 ntBASIC1.01□□□□□ -2.25
PCDH9Q9HC56 MIR4264-201ENST00000583520 66 ntBASIC1.01□□□□□ -2.25
PCDH9Q9HC56 AC108081.1-201ENST00000604358 221 ntBASIC1.01□□□□□ -2.25
PCDH9Q9HC56 AP001340.1-201ENST00000624405 217 ntBASIC1.01□□□□□ -2.25
PCDH9Q9HC56 MIR6841-201ENST00000637129 72 ntBASIC1.01□□□□□ -2.25
PCDH9Q9HC56 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.01□□□□□ -2.25
PCDH9Q9HC56 Y_RNA.114-201ENST00000363265 113 ntBASIC1□□□□□ -2.25
PCDH9Q9HC56 Y_RNA.430-201ENST00000384081 110 ntBASIC1□□□□□ -2.25
PCDH9Q9HC56 RNU6-994P-201ENST00000410507 111 ntBASIC1□□□□□ -2.25
PCDH9Q9HC56 RNA5SP144-201ENST00000410846 116 ntBASIC1□□□□□ -2.25
PCDH9Q9HC56 AL022718.1-201ENST00000412004 84 ntBASIC1□□□□□ -2.25
PCDH9Q9HC56 POLR2J4-204ENST00000418424 324 ntBASIC1□□□□□ -2.25
PCDH9Q9HC56 MTND4LP9-201ENST00000427694 174 ntBASIC1□□□□□ -2.25
PCDH9Q9HC56 RNU7-164P-201ENST00000459221 62 ntBASIC1□□□□□ -2.25
PCDH9Q9HC56 snoU13.21-201ENST00000459368 105 ntBASIC1□□□□□ -2.25
PCDH9Q9HC56 SNORD124-201ENST00000459577 104 ntBASIC1□□□□□ -2.25
PCDH9Q9HC56 RPS23P4-201ENST00000487908 423 ntBASIC1□□□□□ -2.25
PCDH9Q9HC56 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1□□□□□ -2.25
PCDH9Q9HC56 AC113410.1-201ENST00000505029 247 ntBASIC1□□□□□ -2.25
PCDH9Q9HC56 RNU6-1258P-201ENST00000516911 111 ntBASIC1□□□□□ -2.25
PCDH9Q9HC56 MIR4305-201ENST00000583252 102 ntBASIC1□□□□□ -2.25
PCDH9Q9HC56 MIR377-201ENST00000362145 69 ntBASIC0.99□□□□□ -2.25
PCDH9Q9HC56 RNU1-124P-201ENST00000363861 145 ntBASIC0.99□□□□□ -2.25
PCDH9Q9HC56 Y_RNA.224-201ENST00000364308 111 ntBASIC0.99□□□□□ -2.25
PCDH9Q9HC56 RNU6-580P-201ENST00000365159 107 ntBASIC0.99□□□□□ -2.25
PCDH9Q9HC56 SNORA40-201ENST00000388090 126 ntBASIC0.99□□□□□ -2.25
PCDH9Q9HC56 SNORD111-201ENST00000408139 94 ntBASIC0.99□□□□□ -2.25
PCDH9Q9HC56 RNU6-257P-201ENST00000410238 98 ntBASIC0.99□□□□□ -2.25
PCDH9Q9HC56 AL512326.2-201ENST00000426359 151 ntBASIC0.99□□□□□ -2.25
PCDH9Q9HC56 RNU6-893P-201ENST00000458841 100 ntBASIC0.99□□□□□ -2.25
PCDH9Q9HC56 RNU6-1211P-201ENST00000459179 105 ntBASIC0.99□□□□□ -2.25
PCDH9Q9HC56 RNU7-113P-201ENST00000459273 62 ntBASIC0.99□□□□□ -2.25
PCDH9Q9HC56 UBL5P1-201ENST00000507979 193 ntBASIC0.99□□□□□ -2.25
PCDH9Q9HC56 RNU2-35P-201ENST00000516446 142 ntBASIC0.99□□□□□ -2.25
PCDH9Q9HC56 RNU6-113P-201ENST00000516653 101 ntBASIC0.99□□□□□ -2.25
PCDH9Q9HC56 AC106800.4-201ENST00000614905 153 ntBASIC0.99□□□□□ -2.25
PCDH9Q9HC56 AL137067.1-201ENST00000615933 120 ntBASIC0.99□□□□□ -2.25
PCDH9Q9HC56 MIR6740-201ENST00000618268 113 ntBASIC0.99□□□□□ -2.25
PCDH9Q9HC56 AC012676.2-201ENST00000619258 186 ntBASIC0.99□□□□□ -2.25
PCDH9Q9HC56 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
PCDH9Q9HC56 RNU6-235P-201ENST00000362644 107 ntBASIC0.98□□□□□ -2.25
PCDH9Q9HC56 Y_RNA.168-201ENST00000363740 102 ntBASIC0.98□□□□□ -2.25
PCDH9Q9HC56 RNA5SP237-201ENST00000410414 113 ntBASIC0.98□□□□□ -2.25
PCDH9Q9HC56 SNORD83.1-201ENST00000411362 77 ntBASIC0.98□□□□□ -2.25
PCDH9Q9HC56 AC015818.7-201ENST00000428754 109 ntBASIC0.98□□□□□ -2.25
PCDH9Q9HC56 SUMO1P3-201ENST00000439961 304 ntBASIC0.98□□□□□ -2.25
PCDH9Q9HC56 AC087499.7-201ENST00000441958 109 ntBASIC0.98□□□□□ -2.25
PCDH9Q9HC56 snoU13.2-201ENST00000459201 104 ntBASIC0.98□□□□□ -2.25
PCDH9Q9HC56 U7.2-201ENST00000607576 63 ntBASIC0.98□□□□□ -2.25
PCDH9Q9HC56 uc_338.6-201ENST00000613544 171 ntBASIC0.98□□□□□ -2.25
PCDH9Q9HC56 TUG1_4.1-201ENST00000619464 181 ntBASIC0.98□□□□□ -2.25
PCDH9Q9HC56 MIR942-201ENST00000401111 86 ntBASIC0.97□□□□□ -2.25
PCDH9Q9HC56 RNA5SP33-201ENST00000516687 98 ntBASIC0.97□□□□□ -2.25
PCDH9Q9HC56 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.97□□□□□ -2.25
PCDH9Q9HC56 AL391516.1-201ENST00000554380 2449 ntBASIC0.97□□□□□ -2.25
PCDH9Q9HC56 SNORD114-27-201ENST00000363766 70 ntBASIC0.96□□□□□ -2.26
PCDH9Q9HC56 Y_RNA.470-201ENST00000384307 117 ntBASIC0.96□□□□□ -2.26
PCDH9Q9HC56 SNORA18-201ENST00000384416 132 ntBASIC0.96□□□□□ -2.26
PCDH9Q9HC56 RNU6-342P-201ENST00000384521 104 ntBASIC0.96□□□□□ -2.26
PCDH9Q9HC56 MIR613-201ENST00000385248 95 ntBASIC0.96□□□□□ -2.26
PCDH9Q9HC56 RNU6-1165P-201ENST00000410119 107 ntBASIC0.96□□□□□ -2.26
PCDH9Q9HC56 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.96□□□□□ -2.26
PCDH9Q9HC56 RNU7-123P-201ENST00000515911 60 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 167.4 ms