Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 MIR4648-201ENST00000580107 72 ntBASIC1.85□□□□□ -2.11
SEC61A2Q9H9S3 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.85□□□□□ -2.11
SEC61A2Q9H9S3 MIR376B-201ENST00000614515 100 ntBASIC1.85□□□□□ -2.11
SEC61A2Q9H9S3 MIR1245B-201ENST00000636115 69 ntBASIC1.85□□□□□ -2.11
SEC61A2Q9H9S3 Z97988.1-201ENST00000637697 135 ntBASIC1.85□□□□□ -2.11
SEC61A2Q9H9S3 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.85□□□□□ -2.11
SEC61A2Q9H9S3 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.84□□□□□ -2.11
SEC61A2Q9H9S3 RNU6-1313P-201ENST00000362622 102 ntBASIC1.84□□□□□ -2.11
SEC61A2Q9H9S3 Y_RNA.95-201ENST00000363079 95 ntBASIC1.84□□□□□ -2.11
SEC61A2Q9H9S3 Y_RNA.190-201ENST00000363964 101 ntBASIC1.84□□□□□ -2.11
SEC61A2Q9H9S3 MIR524-201ENST00000385242 87 ntBASIC1.84□□□□□ -2.11
SEC61A2Q9H9S3 MRPL35P3-201ENST00000421557 364 ntBASIC1.84□□□□□ -2.11
SEC61A2Q9H9S3 SNORD67.1-201ENST00000516618 108 ntBASIC1.84□□□□□ -2.11
SEC61A2Q9H9S3 RNU2-19P-201ENST00000517288 84 ntBASIC1.84□□□□□ -2.11
SEC61A2Q9H9S3 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.84□□□□□ -2.11
SEC61A2Q9H9S3 AC105081.1-201ENST00000617727 106 ntBASIC1.84□□□□□ -2.11
SEC61A2Q9H9S3 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.84□□□□□ -2.11
SEC61A2Q9H9S3 MIR4251-201ENST00000635819 61 ntBASIC1.84□□□□□ -2.11
SEC61A2Q9H9S3 RNA5SP160-201ENST00000364866 120 ntBASIC1.83□□□□□ -2.12
SEC61A2Q9H9S3 Y_RNA.377-201ENST00000365644 108 ntBASIC1.83□□□□□ -2.12
SEC61A2Q9H9S3 MIR194-1-201ENST00000384892 85 ntBASIC1.83□□□□□ -2.12
SEC61A2Q9H9S3 AC096949.1-201ENST00000412047 152 ntBASIC1.83□□□□□ -2.12
SEC61A2Q9H9S3 RPL31P63-201ENST00000422565 375 ntBASIC1.83□□□□□ -2.12
SEC61A2Q9H9S3 AC109327.2-201ENST00000448339 378 ntBASIC1.83□□□□□ -2.12
SEC61A2Q9H9S3 RNU7-79P-201ENST00000516082 62 ntBASIC1.83□□□□□ -2.12
SEC61A2Q9H9S3 RNU7-35P-201ENST00000517174 62 ntBASIC1.83□□□□□ -2.12
SEC61A2Q9H9S3 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.83□□□□□ -2.12
SEC61A2Q9H9S3 MIR5002-201ENST00000584713 97 ntBASIC1.83□□□□□ -2.12
SEC61A2Q9H9S3 AC096720.1-201ENST00000604441 183 ntBASIC1.83□□□□□ -2.12
SEC61A2Q9H9S3 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.83□□□□□ -2.12
SEC61A2Q9H9S3 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.83□□□□□ -2.12
SEC61A2Q9H9S3 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.83□□□□□ -2.12
SEC61A2Q9H9S3 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.82□□□□□ -2.12
SEC61A2Q9H9S3 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
SEC61A2Q9H9S3 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
SEC61A2Q9H9S3 Y_RNA.354-201ENST00000365448 111 ntBASIC1.82□□□□□ -2.12
SEC61A2Q9H9S3 Y_RNA.448-201ENST00000384185 108 ntBASIC1.82□□□□□ -2.12
SEC61A2Q9H9S3 RNU6-820P-201ENST00000384273 107 ntBASIC1.82□□□□□ -2.12
SEC61A2Q9H9S3 MIR34C-201ENST00000384831 77 ntBASIC1.82□□□□□ -2.12
SEC61A2Q9H9S3 MIR513A1-201ENST00000385138 129 ntBASIC1.82□□□□□ -2.12
SEC61A2Q9H9S3 RNA5SP445-201ENST00000515889 115 ntBASIC1.82□□□□□ -2.12
SEC61A2Q9H9S3 RNU6-322P-201ENST00000516010 103 ntBASIC1.82□□□□□ -2.12
SEC61A2Q9H9S3 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.82□□□□□ -2.12
SEC61A2Q9H9S3 MIR3935-201ENST00000583472 104 ntBASIC1.82□□□□□ -2.12
SEC61A2Q9H9S3 Y_RNA.783-201ENST00000613546 102 ntBASIC1.82□□□□□ -2.12
SEC61A2Q9H9S3 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
SEC61A2Q9H9S3 AL451046.2-201ENST00000403074 277 ntBASIC1.81□□□□□ -2.12
SEC61A2Q9H9S3 RNU6-922P-201ENST00000516753 99 ntBASIC1.81□□□□□ -2.12
SEC61A2Q9H9S3 MIR514B-201ENST00000516774 80 ntBASIC1.81□□□□□ -2.12
SEC61A2Q9H9S3 Y_RNA.705-201ENST00000516862 110 ntBASIC1.81□□□□□ -2.12
SEC61A2Q9H9S3 RNU6-86P-201ENST00000606534 107 ntBASIC1.81□□□□□ -2.12
SEC61A2Q9H9S3 AL359851.1-201ENST00000569460 4997 ntBASIC1.81□□□□□ -2.12
SEC61A2Q9H9S3 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.8□□□□□ -2.12
SEC61A2Q9H9S3 SNORD38B-201ENST00000384690 67 ntBASIC1.8□□□□□ -2.12
SEC61A2Q9H9S3 RPS29P28-201ENST00000446439 141 ntBASIC1.8□□□□□ -2.12
SEC61A2Q9H9S3 AC009474.2-201ENST00000451383 136 ntBASIC1.8□□□□□ -2.12
SEC61A2Q9H9S3 RPS27P21-201ENST00000486977 252 ntBASIC1.8□□□□□ -2.12
SEC61A2Q9H9S3 SNRPGP19-201ENST00000603826 189 ntBASIC1.8□□□□□ -2.12
SEC61A2Q9H9S3 SNORD38B-202ENST00000625943 69 ntBASIC1.8□□□□□ -2.12
SEC61A2Q9H9S3 Y_RNA.73-201ENST00000362910 113 ntBASIC1.79□□□□□ -2.12
SEC61A2Q9H9S3 RNY1P1-201ENST00000364372 112 ntBASIC1.79□□□□□ -2.12
SEC61A2Q9H9S3 MIR653-201ENST00000385279 96 ntBASIC1.79□□□□□ -2.12
SEC61A2Q9H9S3 RNU6-1321P-201ENST00000390905 107 ntBASIC1.79□□□□□ -2.12
SEC61A2Q9H9S3 RNU6-887P-201ENST00000410660 100 ntBASIC1.79□□□□□ -2.12
SEC61A2Q9H9S3 SNORD111.1-201ENST00000516421 86 ntBASIC1.79□□□□□ -2.12
SEC61A2Q9H9S3 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.79□□□□□ -2.12
SEC61A2Q9H9S3 IGLL4P-201ENST00000614590 133 ntBASIC1.79□□□□□ -2.12
SEC61A2Q9H9S3 MIR219B-201ENST00000637023 88 ntBASIC1.79□□□□□ -2.12
SEC61A2Q9H9S3 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.79□□□□□ -2.12
SEC61A2Q9H9S3 RNU6-865P-201ENST00000364772 107 ntBASIC1.78□□□□□ -2.12
SEC61A2Q9H9S3 AC027119.1-201ENST00000440877 241 ntBASIC1.78□□□□□ -2.12
SEC61A2Q9H9S3 JTBP1-201ENST00000441314 247 ntBASIC1.78□□□□□ -2.12
SEC61A2Q9H9S3 RN7SL274P-201ENST00000492268 272 ntBASIC1.78□□□□□ -2.12
SEC61A2Q9H9S3 RNU7-137P-201ENST00000516788 62 ntBASIC1.78□□□□□ -2.12
SEC61A2Q9H9S3 RNU6-1006P-201ENST00000516998 103 ntBASIC1.78□□□□□ -2.12
SEC61A2Q9H9S3 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.78□□□□□ -2.12
SEC61A2Q9H9S3 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
SEC61A2Q9H9S3 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
SEC61A2Q9H9S3 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.13
SEC61A2Q9H9S3 RNU6-1163P-201ENST00000364516 107 ntBASIC1.77□□□□□ -2.13
SEC61A2Q9H9S3 RNU6-813P-201ENST00000384691 107 ntBASIC1.77□□□□□ -2.13
SEC61A2Q9H9S3 SNORD41-201ENST00000386967 70 ntBASIC1.77□□□□□ -2.13
SEC61A2Q9H9S3 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
SEC61A2Q9H9S3 U8.15-201ENST00000390947 134 ntBASIC1.77□□□□□ -2.13
SEC61A2Q9H9S3 RNU6-972P-201ENST00000391208 107 ntBASIC1.77□□□□□ -2.13
SEC61A2Q9H9S3 SUMO2P12-201ENST00000405924 140 ntBASIC1.77□□□□□ -2.13
SEC61A2Q9H9S3 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.77□□□□□ -2.13
SEC61A2Q9H9S3 RNU6-402P-201ENST00000410678 103 ntBASIC1.77□□□□□ -2.13
SEC61A2Q9H9S3 AL161935.2-201ENST00000414627 60 ntBASIC1.77□□□□□ -2.13
SEC61A2Q9H9S3 AC022137.1-201ENST00000483735 151 ntBASIC1.77□□□□□ -2.13
SEC61A2Q9H9S3 RNU6-947P-201ENST00000516264 106 ntBASIC1.77□□□□□ -2.13
SEC61A2Q9H9S3 AP003327.1-201ENST00000529684 127 ntBASIC1.77□□□□□ -2.13
SEC61A2Q9H9S3 MIR3192-201ENST00000584920 77 ntBASIC1.77□□□□□ -2.13
SEC61A2Q9H9S3 AC103810.7-201ENST00000607821 91 ntBASIC1.77□□□□□ -2.13
SEC61A2Q9H9S3 SEPT14P17-201ENST00000617978 177 ntBASIC1.77□□□□□ -2.13
SEC61A2Q9H9S3 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
SEC61A2Q9H9S3 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
SEC61A2Q9H9S3 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.76□□□□□ -2.13
SEC61A2Q9H9S3 SNORD114-1-201ENST00000362705 72 ntBASIC1.76□□□□□ -2.13
SEC61A2Q9H9S3 Y_RNA.96-201ENST00000363092 109 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 167.1 ms