Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 AC104984.5-201ENST00000586878 94 ntBASIC1.46□□□□□ -2.18
PIF1Q9H611 AC021443.1-201ENST00000604478 211 ntBASIC1.46□□□□□ -2.18
PIF1Q9H611 MIR588-201ENST00000384900 83 ntBASIC1.45□□□□□ -2.18
PIF1Q9H611 RNU6-205P-201ENST00000390858 107 ntBASIC1.45□□□□□ -2.18
PIF1Q9H611 RNU6-1154P-201ENST00000391001 104 ntBASIC1.45□□□□□ -2.18
PIF1Q9H611 RNU6-772P-201ENST00000516042 105 ntBASIC1.45□□□□□ -2.18
PIF1Q9H611 RNU6-781P-201ENST00000516377 101 ntBASIC1.45□□□□□ -2.18
PIF1Q9H611 AC023827.1-201ENST00000569247 97 ntBASIC1.45□□□□□ -2.18
PIF1Q9H611 MIR4781-201ENST00000585250 76 ntBASIC1.45□□□□□ -2.18
PIF1Q9H611 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
PIF1Q9H611 Y_RNA.299-201ENST00000364973 94 ntBASIC1.44□□□□□ -2.18
PIF1Q9H611 MIR1323-201ENST00000408090 73 ntBASIC1.44□□□□□ -2.18
PIF1Q9H611 MIR1263-201ENST00000408324 86 ntBASIC1.44□□□□□ -2.18
PIF1Q9H611 Y_RNA.617-201ENST00000410920 90 ntBASIC1.44□□□□□ -2.18
PIF1Q9H611 RNU7-164P-201ENST00000459221 62 ntBASIC1.44□□□□□ -2.18
PIF1Q9H611 RN7SKP179-201ENST00000516126 217 ntBASIC1.44□□□□□ -2.18
PIF1Q9H611 RNU6-313P-201ENST00000516317 112 ntBASIC1.44□□□□□ -2.18
PIF1Q9H611 RNU6-659P-201ENST00000516454 104 ntBASIC1.44□□□□□ -2.18
PIF1Q9H611 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.44□□□□□ -2.18
PIF1Q9H611 MIR517C-201ENST00000385103 95 ntBASIC1.43□□□□□ -2.18
PIF1Q9H611 RNU6-1168P-201ENST00000390831 104 ntBASIC1.43□□□□□ -2.18
PIF1Q9H611 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.43□□□□□ -2.18
PIF1Q9H611 RNU2-51P-201ENST00000410708 197 ntBASIC1.43□□□□□ -2.18
PIF1Q9H611 POLR2J4-204ENST00000418424 324 ntBASIC1.43□□□□□ -2.18
PIF1Q9H611 RNU7-113P-201ENST00000459273 62 ntBASIC1.43□□□□□ -2.18
PIF1Q9H611 AC113410.1-201ENST00000505029 247 ntBASIC1.43□□□□□ -2.18
PIF1Q9H611 BX248123.2-201ENST00000606318 124 ntBASIC1.43□□□□□ -2.18
PIF1Q9H611 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
PIF1Q9H611 SNORD115-2-201ENST00000362842 82 ntBASIC1.42□□□□□ -2.18
PIF1Q9H611 SNORD115-20-201ENST00000365099 82 ntBASIC1.42□□□□□ -2.18
PIF1Q9H611 SNORD58C-201ENST00000365223 64 ntBASIC1.42□□□□□ -2.18
PIF1Q9H611 SNORA22C-201ENST00000384614 134 ntBASIC1.42□□□□□ -2.18
PIF1Q9H611 MIR563-201ENST00000385080 79 ntBASIC1.42□□□□□ -2.18
PIF1Q9H611 MIR942-201ENST00000401111 86 ntBASIC1.42□□□□□ -2.18
PIF1Q9H611 RNU6-1165P-201ENST00000410119 107 ntBASIC1.42□□□□□ -2.18
PIF1Q9H611 RNU6-479P-201ENST00000516348 105 ntBASIC1.42□□□□□ -2.18
PIF1Q9H611 RNA5SP61-201ENST00000516453 100 ntBASIC1.42□□□□□ -2.18
PIF1Q9H611 MIR4661-201ENST00000582720 75 ntBASIC1.42□□□□□ -2.18
PIF1Q9H611 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
PIF1Q9H611 RNU1-42P-201ENST00000364033 160 ntBASIC1.41□□□□□ -2.18
PIF1Q9H611 RNA5SP190-201ENST00000365222 118 ntBASIC1.41□□□□□ -2.18
PIF1Q9H611 RNU6-1081P-201ENST00000384537 107 ntBASIC1.41□□□□□ -2.18
PIF1Q9H611 MIR548I2-201ENST00000408348 149 ntBASIC1.41□□□□□ -2.18
PIF1Q9H611 Y_RNA.630-201ENST00000411370 108 ntBASIC1.41□□□□□ -2.18
PIF1Q9H611 AL591806.2-201ENST00000433122 173 ntBASIC1.41□□□□□ -2.18
PIF1Q9H611 U7.7-201ENST00000459276 60 ntBASIC1.41□□□□□ -2.18
PIF1Q9H611 RNU6-1110P-201ENST00000516462 101 ntBASIC1.41□□□□□ -2.18
PIF1Q9H611 RNY4P20-201ENST00000516678 93 ntBASIC1.41□□□□□ -2.18
PIF1Q9H611 AC025166.1-201ENST00000612411 163 ntBASIC1.41□□□□□ -2.18
PIF1Q9H611 MIR7843-201ENST00000622274 79 ntBASIC1.41□□□□□ -2.18
PIF1Q9H611 AL391516.1-201ENST00000554380 2449 ntBASIC1.41□□□□□ -2.18
PIF1Q9H611 Y_RNA.298-201ENST00000364960 107 ntBASIC1.4□□□□□ -2.19
PIF1Q9H611 MIR764-201ENST00000390811 85 ntBASIC1.4□□□□□ -2.19
PIF1Q9H611 RNA5SP95-201ENST00000410319 137 ntBASIC1.4□□□□□ -2.19
PIF1Q9H611 RNU7-123P-201ENST00000515911 60 ntBASIC1.4□□□□□ -2.19
PIF1Q9H611 RNU2-35P-201ENST00000516446 142 ntBASIC1.4□□□□□ -2.19
PIF1Q9H611 Y_RNA.712-201ENST00000517011 92 ntBASIC1.4□□□□□ -2.19
PIF1Q9H611 SNORD53B-201ENST00000577887 78 ntBASIC1.4□□□□□ -2.19
PIF1Q9H611 MIR548AI-201ENST00000579940 88 ntBASIC1.4□□□□□ -2.19
PIF1Q9H611 AC025627.3-201ENST00000582078 182 ntBASIC1.4□□□□□ -2.19
PIF1Q9H611 MIR6715A-201ENST00000615929 79 ntBASIC1.4□□□□□ -2.19
PIF1Q9H611 MIR1-1-201ENST00000362147 71 ntBASIC1.39□□□□□ -2.19
PIF1Q9H611 RNU6-934P-201ENST00000365154 107 ntBASIC1.39□□□□□ -2.19
PIF1Q9H611 Y_RNA.528-201ENST00000384575 108 ntBASIC1.39□□□□□ -2.19
PIF1Q9H611 SNORD12C-201ENST00000386307 89 ntBASIC1.39□□□□□ -2.19
PIF1Q9H611 RNU6-1086P-201ENST00000410930 100 ntBASIC1.39□□□□□ -2.19
PIF1Q9H611 AL354695.1-201ENST00000427935 228 ntBASIC1.39□□□□□ -2.19
PIF1Q9H611 RPS29P28-201ENST00000446439 141 ntBASIC1.39□□□□□ -2.19
PIF1Q9H611 RPL39P25-201ENST00000449384 154 ntBASIC1.39□□□□□ -2.19
PIF1Q9H611 AC015712.3-201ENST00000559380 164 ntBASIC1.39□□□□□ -2.19
PIF1Q9H611 AL359881.1-201ENST00000602916 267 ntBASIC1.39□□□□□ -2.19
PIF1Q9H611 AL662814.1-201ENST00000617364 121 ntBASIC1.39□□□□□ -2.19
PIF1Q9H611 MIR6740-201ENST00000618268 113 ntBASIC1.39□□□□□ -2.19
PIF1Q9H611 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.39□□□□□ -2.19
PIF1Q9H611 Y_RNA.171-201ENST00000363760 102 ntBASIC1.38□□□□□ -2.19
PIF1Q9H611 Y_RNA.291-201ENST00000364886 113 ntBASIC1.38□□□□□ -2.19
PIF1Q9H611 Y_RNA.531-201ENST00000384589 121 ntBASIC1.38□□□□□ -2.19
PIF1Q9H611 AL512326.2-201ENST00000426359 151 ntBASIC1.38□□□□□ -2.19
PIF1Q9H611 SNORD13-201ENST00000459299 104 ntBASIC1.38□□□□□ -2.19
PIF1Q9H611 RNU6-1258P-201ENST00000516911 111 ntBASIC1.38□□□□□ -2.19
PIF1Q9H611 MIR3914-2-201ENST00000637339 95 ntBASIC1.38□□□□□ -2.19
PIF1Q9H611 RNA5SP205-201ENST00000364653 136 ntBASIC1.37□□□□□ -2.19
PIF1Q9H611 MIRLET7F2-201ENST00000385277 83 ntBASIC1.37□□□□□ -2.19
PIF1Q9H611 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.37□□□□□ -2.19
PIF1Q9H611 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.37□□□□□ -2.19
PIF1Q9H611 RNA5SP136-201ENST00000410906 107 ntBASIC1.37□□□□□ -2.19
PIF1Q9H611 RPS26P5-201ENST00000418544 335 ntBASIC1.37□□□□□ -2.19
PIF1Q9H611 AC108210.2-201ENST00000503681 201 ntBASIC1.37□□□□□ -2.19
PIF1Q9H611 SNORA4-201ENST00000584302 138 ntBASIC1.37□□□□□ -2.19
PIF1Q9H611 MTND5P18-201ENST00000445624 1801 ntBASIC1.37□□□□□ -2.19
PIF1Q9H611 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.37□□□□□ -2.19
PIF1Q9H611 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
PIF1Q9H611 Y_RNA.346-201ENST00000365385 112 ntBASIC1.36□□□□□ -2.19
PIF1Q9H611 MIR1827-201ENST00000408549 66 ntBASIC1.36□□□□□ -2.19
PIF1Q9H611 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.36□□□□□ -2.19
PIF1Q9H611 UBL5P1-201ENST00000507979 193 ntBASIC1.36□□□□□ -2.19
PIF1Q9H611 AC004812.1-201ENST00000540773 146 ntBASIC1.36□□□□□ -2.19
PIF1Q9H611 AC022523.2-201ENST00000561045 150 ntBASIC1.36□□□□□ -2.19
PIF1Q9H611 RNU6-94P-201ENST00000607728 107 ntBASIC1.36□□□□□ -2.19
PIF1Q9H611 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 185.5 ms