Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
NUCKS1Q9H1E3 HSBP1P2-201ENST00000299671 229 ntBASIC2.69□□□□□ -1.98
NUCKS1Q9H1E3 RNU1-91P-201ENST00000364746 163 ntBASIC2.69□□□□□ -1.98
NUCKS1Q9H1E3 RNU1-148P-201ENST00000384472 162 ntBASIC2.69□□□□□ -1.98
NUCKS1Q9H1E3 RNU6-1237P-201ENST00000384777 107 ntBASIC2.69□□□□□ -1.98
NUCKS1Q9H1E3 Z98742.3-201ENST00000418637 326 ntBASIC2.69□□□□□ -1.98
NUCKS1Q9H1E3 HMGN2P3-201ENST00000433603 273 ntBASIC2.69□□□□□ -1.98
NUCKS1Q9H1E3 HMGN2P5-201ENST00000436882 273 ntBASIC2.69□□□□□ -1.98
NUCKS1Q9H1E3 AL450471.1-201ENST00000447509 127 ntBASIC2.69□□□□□ -1.98
NUCKS1Q9H1E3 AC114801.3-201ENST00000510231 177 ntBASIC2.69□□□□□ -1.98
NUCKS1Q9H1E3 RNU6-523P-201ENST00000516304 54 ntBASIC2.69□□□□□ -1.98
NUCKS1Q9H1E3 Y_RNA.788-201ENST00000622394 112 ntBASIC2.69□□□□□ -1.98
NUCKS1Q9H1E3 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.69□□□□□ -1.98
NUCKS1Q9H1E3 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
NUCKS1Q9H1E3 RNU4-32P-201ENST00000363404 141 ntBASIC2.68□□□□□ -1.98
NUCKS1Q9H1E3 Y_RNA.500-201ENST00000384466 111 ntBASIC2.68□□□□□ -1.98
NUCKS1Q9H1E3 MIR27B-201ENST00000385129 97 ntBASIC2.68□□□□□ -1.98
NUCKS1Q9H1E3 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.68□□□□□ -1.98
NUCKS1Q9H1E3 SNORD4B-201ENST00000459083 72 ntBASIC2.68□□□□□ -1.98
NUCKS1Q9H1E3 RNU7-43P-201ENST00000516554 64 ntBASIC2.68□□□□□ -1.98
NUCKS1Q9H1E3 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.68□□□□□ -1.98
NUCKS1Q9H1E3 SUB1P4-201ENST00000566062 339 ntBASIC2.68□□□□□ -1.98
NUCKS1Q9H1E3 MIR4658-201ENST00000584344 65 ntBASIC2.68□□□□□ -1.98
NUCKS1Q9H1E3 AC245884.12-201ENST00000615364 59 ntBASIC2.68□□□□□ -1.98
NUCKS1Q9H1E3 MIR6817-201ENST00000615588 66 ntBASIC2.68□□□□□ -1.98
NUCKS1Q9H1E3 RNU6-1094P-201ENST00000362416 104 ntBASIC2.67□□□□□ -1.98
NUCKS1Q9H1E3 RNU6-624P-201ENST00000363411 107 ntBASIC2.67□□□□□ -1.98
NUCKS1Q9H1E3 RNU6-296P-201ENST00000384608 107 ntBASIC2.67□□□□□ -1.98
NUCKS1Q9H1E3 snoU13.27-201ENST00000459278 104 ntBASIC2.67□□□□□ -1.98
NUCKS1Q9H1E3 MIR548AO-201ENST00000579992 96 ntBASIC2.67□□□□□ -1.98
NUCKS1Q9H1E3 MIR4764-201ENST00000580680 88 ntBASIC2.67□□□□□ -1.98
NUCKS1Q9H1E3 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
NUCKS1Q9H1E3 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.66□□□□□ -1.98
NUCKS1Q9H1E3 MIR424-201ENST00000362227 98 ntBASIC2.66□□□□□ -1.98
NUCKS1Q9H1E3 RNU6-112P-201ENST00000363599 104 ntBASIC2.66□□□□□ -1.98
NUCKS1Q9H1E3 RNA5SP68-201ENST00000363885 119 ntBASIC2.66□□□□□ -1.98
NUCKS1Q9H1E3 SNORA48.1-201ENST00000390879 135 ntBASIC2.66□□□□□ -1.98
NUCKS1Q9H1E3 AL023284.1-201ENST00000403956 276 ntBASIC2.66□□□□□ -1.98
NUCKS1Q9H1E3 RNA5SP148-201ENST00000516527 94 ntBASIC2.66□□□□□ -1.98
NUCKS1Q9H1E3 RNA5SP137-201ENST00000516833 135 ntBASIC2.66□□□□□ -1.98
NUCKS1Q9H1E3 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC2.66□□□□□ -1.98
NUCKS1Q9H1E3 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
NUCKS1Q9H1E3 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
NUCKS1Q9H1E3 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.98
NUCKS1Q9H1E3 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.65□□□□□ -1.99
NUCKS1Q9H1E3 AC019129.1-201ENST00000403786 261 ntBASIC2.65□□□□□ -1.99
NUCKS1Q9H1E3 RPS29P11-201ENST00000496507 171 ntBASIC2.65□□□□□ -1.99
NUCKS1Q9H1E3 RNU6-917P-201ENST00000516294 104 ntBASIC2.65□□□□□ -1.99
NUCKS1Q9H1E3 AC133485.1-201ENST00000567176 124 ntBASIC2.65□□□□□ -1.99
NUCKS1Q9H1E3 AC141846.1-201ENST00000568348 142 ntBASIC2.65□□□□□ -1.99
NUCKS1Q9H1E3 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
NUCKS1Q9H1E3 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
NUCKS1Q9H1E3 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
NUCKS1Q9H1E3 AL596028.1-201ENST00000326971 197 ntBASIC2.64□□□□□ -1.99
NUCKS1Q9H1E3 MIR449A-201ENST00000362113 91 ntBASIC2.64□□□□□ -1.99
NUCKS1Q9H1E3 SNORD114-30-201ENST00000364448 72 ntBASIC2.64□□□□□ -1.99
NUCKS1Q9H1E3 RNU6-590P-201ENST00000365039 107 ntBASIC2.64□□□□□ -1.99
NUCKS1Q9H1E3 RNA5SP465-201ENST00000391195 109 ntBASIC2.64□□□□□ -1.99
NUCKS1Q9H1E3 RNA5SP320-201ENST00000516263 124 ntBASIC2.64□□□□□ -1.99
NUCKS1Q9H1E3 AC067747.1-201ENST00000608026 250 ntBASIC2.64□□□□□ -1.99
NUCKS1Q9H1E3 MIR8066-201ENST00000617280 78 ntBASIC2.64□□□□□ -1.99
NUCKS1Q9H1E3 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
NUCKS1Q9H1E3 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
NUCKS1Q9H1E3 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.63□□□□□ -1.99
NUCKS1Q9H1E3 SNORD38B-201ENST00000384690 67 ntBASIC2.63□□□□□ -1.99
NUCKS1Q9H1E3 RNU4-83P-201ENST00000410863 133 ntBASIC2.63□□□□□ -1.99
NUCKS1Q9H1E3 RNU7-85P-201ENST00000458851 63 ntBASIC2.63□□□□□ -1.99
NUCKS1Q9H1E3 RPL23AP94-201ENST00000512518 302 ntBASIC2.63□□□□□ -1.99
NUCKS1Q9H1E3 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.63□□□□□ -1.99
NUCKS1Q9H1E3 RNA5SP481-201ENST00000516814 122 ntBASIC2.63□□□□□ -1.99
NUCKS1Q9H1E3 AC090897.1-201ENST00000580909 226 ntBASIC2.63□□□□□ -1.99
NUCKS1Q9H1E3 SNORD38B-202ENST00000625943 69 ntBASIC2.63□□□□□ -1.99
NUCKS1Q9H1E3 AC016717.2-201ENST00000609089 5141 ntBASIC2.63□□□□□ -1.99
NUCKS1Q9H1E3 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
NUCKS1Q9H1E3 RNY1P2-201ENST00000364820 117 ntBASIC2.62□□□□□ -1.99
NUCKS1Q9H1E3 MIR518A2-201ENST00000384966 87 ntBASIC2.62□□□□□ -1.99
NUCKS1Q9H1E3 MIR520C-201ENST00000385005 87 ntBASIC2.62□□□□□ -1.99
NUCKS1Q9H1E3 RNA5SP237-201ENST00000410414 113 ntBASIC2.62□□□□□ -1.99
NUCKS1Q9H1E3 AL513328.1-201ENST00000446460 224 ntBASIC2.62□□□□□ -1.99
NUCKS1Q9H1E3 RNU7-26P-201ENST00000458980 63 ntBASIC2.62□□□□□ -1.99
NUCKS1Q9H1E3 snoU13.11-201ENST00000459219 104 ntBASIC2.62□□□□□ -1.99
NUCKS1Q9H1E3 AP000753.3-201ENST00000604083 169 ntBASIC2.62□□□□□ -1.99
NUCKS1Q9H1E3 AL512598.1-201ENST00000610158 273 ntBASIC2.62□□□□□ -1.99
NUCKS1Q9H1E3 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.61□□□□□ -1.99
NUCKS1Q9H1E3 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
NUCKS1Q9H1E3 MIR21-201ENST00000362134 72 ntBASIC2.61□□□□□ -1.99
NUCKS1Q9H1E3 AL359511.1-201ENST00000402970 211 ntBASIC2.61□□□□□ -1.99
NUCKS1Q9H1E3 AC027119.1-201ENST00000440877 241 ntBASIC2.61□□□□□ -1.99
NUCKS1Q9H1E3 SCARNA18B-201ENST00000458806 135 ntBASIC2.61□□□□□ -1.99
NUCKS1Q9H1E3 RNU6-557P-201ENST00000516842 110 ntBASIC2.61□□□□□ -1.99
NUCKS1Q9H1E3 SNORD53-201ENST00000579969 78 ntBASIC2.61□□□□□ -1.99
NUCKS1Q9H1E3 AL662814.1-201ENST00000617364 121 ntBASIC2.61□□□□□ -1.99
NUCKS1Q9H1E3 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.61□□□□□ -1.99
NUCKS1Q9H1E3 MIRLET7A1-201ENST00000362295 80 ntBASIC2.6□□□□□ -1.99
NUCKS1Q9H1E3 Y_RNA.508-201ENST00000384502 114 ntBASIC2.6□□□□□ -1.99
NUCKS1Q9H1E3 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
NUCKS1Q9H1E3 RNA5SP501-201ENST00000410990 112 ntBASIC2.6□□□□□ -1.99
NUCKS1Q9H1E3 SNRPGP12-201ENST00000449481 213 ntBASIC2.6□□□□□ -1.99
NUCKS1Q9H1E3 AC079804.2-201ENST00000490376 200 ntBASIC2.6□□□□□ -1.99
NUCKS1Q9H1E3 MIR3134-201ENST00000579433 74 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 266.6 ms