Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 RPL30P7-201ENST00000479312 323 ntBASIC1.52□□□□□ -2.17
AMBRA1Q9C0C7 SNORD33.1-201ENST00000516213 88 ntBASIC1.52□□□□□ -2.17
AMBRA1Q9C0C7 MTND5P34-201ENST00000568888 325 ntBASIC1.52□□□□□ -2.17
AMBRA1Q9C0C7 MIR4422-201ENST00000581938 83 ntBASIC1.52□□□□□ -2.17
AMBRA1Q9C0C7 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
AMBRA1Q9C0C7 SNORA22.1-201ENST00000362701 134 ntBASIC1.51□□□□□ -2.17
AMBRA1Q9C0C7 SNORD20-201ENST00000384550 80 ntBASIC1.51□□□□□ -2.17
AMBRA1Q9C0C7 RNU6-1104P-201ENST00000384723 104 ntBASIC1.51□□□□□ -2.17
AMBRA1Q9C0C7 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.51□□□□□ -2.17
AMBRA1Q9C0C7 RNU6-1258P-201ENST00000516911 111 ntBASIC1.51□□□□□ -2.17
AMBRA1Q9C0C7 MIR6841-201ENST00000637129 72 ntBASIC1.51□□□□□ -2.17
AMBRA1Q9C0C7 Y_RNA.171-201ENST00000363760 102 ntBASIC1.5□□□□□ -2.17
AMBRA1Q9C0C7 SNORD38B-201ENST00000384690 67 ntBASIC1.5□□□□□ -2.17
AMBRA1Q9C0C7 MIR548A1-201ENST00000385041 97 ntBASIC1.5□□□□□ -2.17
AMBRA1Q9C0C7 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.5□□□□□ -2.17
AMBRA1Q9C0C7 RNU7-113P-201ENST00000459273 62 ntBASIC1.5□□□□□ -2.17
AMBRA1Q9C0C7 AL512310.8-201ENST00000550183 120 ntBASIC1.5□□□□□ -2.17
AMBRA1Q9C0C7 PRELID3BP2-201ENST00000605362 201 ntBASIC1.5□□□□□ -2.17
AMBRA1Q9C0C7 MIR6734-201ENST00000621166 68 ntBASIC1.5□□□□□ -2.17
AMBRA1Q9C0C7 SNORD38B-202ENST00000625943 69 ntBASIC1.5□□□□□ -2.17
AMBRA1Q9C0C7 SNORD115-2-201ENST00000362842 82 ntBASIC1.49□□□□□ -2.17
AMBRA1Q9C0C7 RNY4P6-201ENST00000363667 96 ntBASIC1.49□□□□□ -2.17
AMBRA1Q9C0C7 Y_RNA.213-201ENST00000364178 111 ntBASIC1.49□□□□□ -2.17
AMBRA1Q9C0C7 RNU6-1325P-201ENST00000364905 105 ntBASIC1.49□□□□□ -2.17
AMBRA1Q9C0C7 SNORD115-20-201ENST00000365099 82 ntBASIC1.49□□□□□ -2.17
AMBRA1Q9C0C7 Y_RNA.327-201ENST00000365201 102 ntBASIC1.49□□□□□ -2.17
AMBRA1Q9C0C7 MIR320A-201ENST00000385302 82 ntBASIC1.49□□□□□ -2.17
AMBRA1Q9C0C7 RNU6-602P-201ENST00000411155 105 ntBASIC1.49□□□□□ -2.17
AMBRA1Q9C0C7 snoU13.25-201ENST00000458945 104 ntBASIC1.49□□□□□ -2.17
AMBRA1Q9C0C7 RNA5SP220-201ENST00000516298 104 ntBASIC1.49□□□□□ -2.17
AMBRA1Q9C0C7 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.49□□□□□ -2.17
AMBRA1Q9C0C7 CYP3A52P-201ENST00000563326 91 ntBASIC1.49□□□□□ -2.17
AMBRA1Q9C0C7 MIR8081-201ENST00000611533 95 ntBASIC1.49□□□□□ -2.17
AMBRA1Q9C0C7 MIR6504-201ENST00000613520 61 ntBASIC1.49□□□□□ -2.17
AMBRA1Q9C0C7 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
AMBRA1Q9C0C7 SNORA25.3-201ENST00000363205 127 ntBASIC1.48□□□□□ -2.17
AMBRA1Q9C0C7 Y_RNA.191-201ENST00000363972 113 ntBASIC1.48□□□□□ -2.17
AMBRA1Q9C0C7 MT-TI-201ENST00000387365 69 ntBASIC1.48□□□□□ -2.17
AMBRA1Q9C0C7 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
AMBRA1Q9C0C7 AC113410.1-201ENST00000505029 247 ntBASIC1.48□□□□□ -2.17
AMBRA1Q9C0C7 RNU6-902P-201ENST00000517212 91 ntBASIC1.48□□□□□ -2.17
AMBRA1Q9C0C7 AC022523.2-201ENST00000561045 150 ntBASIC1.48□□□□□ -2.17
AMBRA1Q9C0C7 SNORD53B-201ENST00000577887 78 ntBASIC1.48□□□□□ -2.17
AMBRA1Q9C0C7 MIR4285-201ENST00000581001 85 ntBASIC1.48□□□□□ -2.17
AMBRA1Q9C0C7 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.48□□□□□ -2.17
AMBRA1Q9C0C7 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
AMBRA1Q9C0C7 Y_RNA.299-201ENST00000364973 94 ntBASIC1.47□□□□□ -2.17
AMBRA1Q9C0C7 RNU6-215P-201ENST00000365169 102 ntBASIC1.47□□□□□ -2.17
AMBRA1Q9C0C7 SNORD116-21-201ENST00000384507 92 ntBASIC1.47□□□□□ -2.17
AMBRA1Q9C0C7 RNU6-429P-201ENST00000384582 108 ntBASIC1.47□□□□□ -2.17
AMBRA1Q9C0C7 AC090844.1-201ENST00000422019 156 ntBASIC1.47□□□□□ -2.17
AMBRA1Q9C0C7 RPS27P16-201ENST00000425758 201 ntBASIC1.47□□□□□ -2.17
AMBRA1Q9C0C7 AP003716.2-201ENST00000528260 108 ntBASIC1.47□□□□□ -2.17
AMBRA1Q9C0C7 MIR6129-201ENST00000616087 109 ntBASIC1.47□□□□□ -2.17
AMBRA1Q9C0C7 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.47□□□□□ -2.17
AMBRA1Q9C0C7 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.47□□□□□ -2.17
AMBRA1Q9C0C7 RNU6-396P-201ENST00000365369 105 ntBASIC1.46□□□□□ -2.18
AMBRA1Q9C0C7 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.46□□□□□ -2.18
AMBRA1Q9C0C7 MIR1302-7-201ENST00000408841 72 ntBASIC1.46□□□□□ -2.18
AMBRA1Q9C0C7 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.46□□□□□ -2.18
AMBRA1Q9C0C7 AC245047.7-201ENST00000440265 293 ntBASIC1.46□□□□□ -2.18
AMBRA1Q9C0C7 RNA5SP33-201ENST00000516687 98 ntBASIC1.46□□□□□ -2.18
AMBRA1Q9C0C7 RNU6-165P-201ENST00000517170 99 ntBASIC1.46□□□□□ -2.18
AMBRA1Q9C0C7 AC007012.1-201ENST00000567192 175 ntBASIC1.46□□□□□ -2.18
AMBRA1Q9C0C7 SNORA4-201ENST00000584302 138 ntBASIC1.46□□□□□ -2.18
AMBRA1Q9C0C7 AL161722.3-201ENST00000605789 2983 ntBASIC1.46□□□□□ -2.18
AMBRA1Q9C0C7 RNA5SP264-201ENST00000363115 107 ntBASIC1.45□□□□□ -2.18
AMBRA1Q9C0C7 Y_RNA.470-201ENST00000384307 117 ntBASIC1.45□□□□□ -2.18
AMBRA1Q9C0C7 RNU4-69P-201ENST00000410677 143 ntBASIC1.45□□□□□ -2.18
AMBRA1Q9C0C7 AC244023.1-201ENST00000426884 112 ntBASIC1.45□□□□□ -2.18
AMBRA1Q9C0C7 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.45□□□□□ -2.18
AMBRA1Q9C0C7 RNU6-919P-201ENST00000516731 104 ntBASIC1.45□□□□□ -2.18
AMBRA1Q9C0C7 RNU7-6P-201ENST00000516845 62 ntBASIC1.45□□□□□ -2.18
AMBRA1Q9C0C7 RNU11-2P-201ENST00000516898 142 ntBASIC1.45□□□□□ -2.18
AMBRA1Q9C0C7 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.45□□□□□ -2.18
AMBRA1Q9C0C7 MIR3163-201ENST00000581592 73 ntBASIC1.45□□□□□ -2.18
AMBRA1Q9C0C7 AC242498.1-201ENST00000604134 111 ntBASIC1.45□□□□□ -2.18
AMBRA1Q9C0C7 MIR8065-201ENST00000620577 100 ntBASIC1.45□□□□□ -2.18
AMBRA1Q9C0C7 Y_RNA.35-201ENST00000362601 101 ntBASIC1.44□□□□□ -2.18
AMBRA1Q9C0C7 RNU6-392P-201ENST00000364926 101 ntBASIC1.44□□□□□ -2.18
AMBRA1Q9C0C7 RNU6-1054P-201ENST00000411293 104 ntBASIC1.44□□□□□ -2.18
AMBRA1Q9C0C7 RNU7-95P-201ENST00000459222 64 ntBASIC1.44□□□□□ -2.18
AMBRA1Q9C0C7 RPS23P4-201ENST00000487908 423 ntBASIC1.44□□□□□ -2.18
AMBRA1Q9C0C7 RNA5SP480-201ENST00000516840 109 ntBASIC1.44□□□□□ -2.18
AMBRA1Q9C0C7 RN7SKP88-201ENST00000516847 250 ntBASIC1.44□□□□□ -2.18
AMBRA1Q9C0C7 7SK.8-201ENST00000612110 250 ntBASIC1.44□□□□□ -2.18
AMBRA1Q9C0C7 7SK.11-201ENST00000615477 250 ntBASIC1.44□□□□□ -2.18
AMBRA1Q9C0C7 7SK.13-201ENST00000622040 250 ntBASIC1.44□□□□□ -2.18
AMBRA1Q9C0C7 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.44□□□□□ -2.18
AMBRA1Q9C0C7 AL391516.1-201ENST00000554380 2449 ntBASIC1.44□□□□□ -2.18
AMBRA1Q9C0C7 RNU6-997P-201ENST00000384725 107 ntBASIC1.43□□□□□ -2.18
AMBRA1Q9C0C7 MIR1276-201ENST00000408707 83 ntBASIC1.43□□□□□ -2.18
AMBRA1Q9C0C7 RNU1-92P-201ENST00000517017 135 ntBASIC1.43□□□□□ -2.18
AMBRA1Q9C0C7 MIR4679-2-201ENST00000578358 77 ntBASIC1.43□□□□□ -2.18
AMBRA1Q9C0C7 MIR4303-201ENST00000581299 66 ntBASIC1.43□□□□□ -2.18
AMBRA1Q9C0C7 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
AMBRA1Q9C0C7 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.42□□□□□ -2.18
AMBRA1Q9C0C7 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
AMBRA1Q9C0C7 MIR103A2-201ENST00000362154 78 ntBASIC1.42□□□□□ -2.18
AMBRA1Q9C0C7 RNU6-880P-201ENST00000384526 107 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 168 ms