Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.09□□□□□ -2.07
FOXP3Q9BZS1 RNY4P29-201ENST00000410801 97 ntBASIC2.09□□□□□ -2.07
FOXP3Q9BZS1 RNU6-602P-201ENST00000411155 105 ntBASIC2.09□□□□□ -2.07
FOXP3Q9BZS1 RNU6-322P-201ENST00000516010 103 ntBASIC2.09□□□□□ -2.07
FOXP3Q9BZS1 RNU7-35P-201ENST00000517174 62 ntBASIC2.09□□□□□ -2.07
FOXP3Q9BZS1 MIR4287-201ENST00000579398 78 ntBASIC2.09□□□□□ -2.07
FOXP3Q9BZS1 AC012531.4-201ENST00000616509 177 ntBASIC2.09□□□□□ -2.07
FOXP3Q9BZS1 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.08
FOXP3Q9BZS1 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
FOXP3Q9BZS1 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
FOXP3Q9BZS1 RNU6-1313P-201ENST00000362622 102 ntBASIC2.08□□□□□ -2.08
FOXP3Q9BZS1 RNU6-342P-201ENST00000384521 104 ntBASIC2.08□□□□□ -2.08
FOXP3Q9BZS1 SNORA26.2-201ENST00000390922 122 ntBASIC2.08□□□□□ -2.08
FOXP3Q9BZS1 RNU6-482P-201ENST00000391068 107 ntBASIC2.08□□□□□ -2.08
FOXP3Q9BZS1 RNA5SP212-201ENST00000391223 107 ntBASIC2.08□□□□□ -2.08
FOXP3Q9BZS1 AC245047.7-201ENST00000440265 293 ntBASIC2.08□□□□□ -2.08
FOXP3Q9BZS1 JTBP1-201ENST00000441314 247 ntBASIC2.08□□□□□ -2.08
FOXP3Q9BZS1 RNU6-795P-201ENST00000516323 103 ntBASIC2.08□□□□□ -2.08
FOXP3Q9BZS1 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.08□□□□□ -2.08
FOXP3Q9BZS1 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.08□□□□□ -2.08
FOXP3Q9BZS1 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.08□□□□□ -2.08
FOXP3Q9BZS1 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.08□□□□□ -2.08
FOXP3Q9BZS1 SNORD115-35-201ENST00000365122 82 ntBASIC2.07□□□□□ -2.08
FOXP3Q9BZS1 SNORA18-201ENST00000384416 132 ntBASIC2.07□□□□□ -2.08
FOXP3Q9BZS1 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
FOXP3Q9BZS1 RNU7-61P-201ENST00000515897 61 ntBASIC2.07□□□□□ -2.08
FOXP3Q9BZS1 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.07□□□□□ -2.08
FOXP3Q9BZS1 MIR548AO-201ENST00000579992 96 ntBASIC2.07□□□□□ -2.08
FOXP3Q9BZS1 MIR4251-201ENST00000635819 61 ntBASIC2.07□□□□□ -2.08
FOXP3Q9BZS1 AP000648.3-201ENST00000623539 4507 ntBASIC2.06□□□□□ -2.08
FOXP3Q9BZS1 RNA5SP276-201ENST00000362580 94 ntBASIC2.06□□□□□ -2.08
FOXP3Q9BZS1 SNORD45B-201ENST00000364617 72 ntBASIC2.06□□□□□ -2.08
FOXP3Q9BZS1 MIR513A1-201ENST00000385138 129 ntBASIC2.06□□□□□ -2.08
FOXP3Q9BZS1 AL451046.2-201ENST00000403074 277 ntBASIC2.06□□□□□ -2.08
FOXP3Q9BZS1 RNU7-41P-201ENST00000515917 61 ntBASIC2.06□□□□□ -2.08
FOXP3Q9BZS1 RNU7-2P-201ENST00000516096 62 ntBASIC2.06□□□□□ -2.08
FOXP3Q9BZS1 RNA5SP364-201ENST00000516938 78 ntBASIC2.06□□□□□ -2.08
FOXP3Q9BZS1 RNU6-548P-201ENST00000517083 115 ntBASIC2.06□□□□□ -2.08
FOXP3Q9BZS1 CYP3A52P-201ENST00000563326 91 ntBASIC2.06□□□□□ -2.08
FOXP3Q9BZS1 AL353997.5-201ENST00000618886 171 ntBASIC2.06□□□□□ -2.08
FOXP3Q9BZS1 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
FOXP3Q9BZS1 Y_RNA.290-201ENST00000364879 114 ntBASIC2.05□□□□□ -2.08
FOXP3Q9BZS1 Y_RNA.388-201ENST00000383919 113 ntBASIC2.05□□□□□ -2.08
FOXP3Q9BZS1 RNU6-644P-201ENST00000391155 98 ntBASIC2.05□□□□□ -2.08
FOXP3Q9BZS1 HMGN2P23-201ENST00000456759 269 ntBASIC2.05□□□□□ -2.08
FOXP3Q9BZS1 RPL23AP42-201ENST00000471152 471 ntBASIC2.05□□□□□ -2.08
FOXP3Q9BZS1 RN7SL274P-201ENST00000492268 272 ntBASIC2.05□□□□□ -2.08
FOXP3Q9BZS1 AC022254.1-201ENST00000567857 235 ntBASIC2.05□□□□□ -2.08
FOXP3Q9BZS1 MIR4777-201ENST00000583710 86 ntBASIC2.05□□□□□ -2.08
FOXP3Q9BZS1 uc_338.20-201ENST00000621563 178 ntBASIC2.05□□□□□ -2.08
FOXP3Q9BZS1 AL512310.12-203ENST00000640543 90 ntBASIC2.05□□□□□ -2.08
FOXP3Q9BZS1 AC091304.10-201ENST00000641554 121 ntBASIC2.05□□□□□ -2.08
FOXP3Q9BZS1 RNU6-60P-201ENST00000364792 103 ntBASIC2.04□□□□□ -2.08
FOXP3Q9BZS1 RNA5SP259-201ENST00000365541 109 ntBASIC2.04□□□□□ -2.08
FOXP3Q9BZS1 MIR206-201ENST00000384872 86 ntBASIC2.04□□□□□ -2.08
FOXP3Q9BZS1 MIR676-201ENST00000390702 67 ntBASIC2.04□□□□□ -2.08
FOXP3Q9BZS1 AC090844.1-201ENST00000422019 156 ntBASIC2.04□□□□□ -2.08
FOXP3Q9BZS1 AC108729.3-201ENST00000513484 108 ntBASIC2.04□□□□□ -2.08
FOXP3Q9BZS1 AC026421.1-201ENST00000519101 163 ntBASIC2.04□□□□□ -2.08
FOXP3Q9BZS1 MIR548Z-201ENST00000584743 97 ntBASIC2.04□□□□□ -2.08
FOXP3Q9BZS1 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
FOXP3Q9BZS1 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.04□□□□□ -2.08
FOXP3Q9BZS1 Y_RNA.95-201ENST00000363079 95 ntBASIC2.03□□□□□ -2.08
FOXP3Q9BZS1 Y_RNA.96-201ENST00000363092 109 ntBASIC2.03□□□□□ -2.08
FOXP3Q9BZS1 RNU6-439P-201ENST00000384188 106 ntBASIC2.03□□□□□ -2.08
FOXP3Q9BZS1 SNORD41-201ENST00000386967 70 ntBASIC2.03□□□□□ -2.08
FOXP3Q9BZS1 RNU6-1086P-201ENST00000410930 100 ntBASIC2.03□□□□□ -2.08
FOXP3Q9BZS1 RNA5SP489-201ENST00000410986 109 ntBASIC2.03□□□□□ -2.08
FOXP3Q9BZS1 MRPL35P3-201ENST00000421557 364 ntBASIC2.03□□□□□ -2.08
FOXP3Q9BZS1 SNORD111.1-201ENST00000516421 86 ntBASIC2.03□□□□□ -2.08
FOXP3Q9BZS1 RNU6-295P-201ENST00000516901 104 ntBASIC2.03□□□□□ -2.08
FOXP3Q9BZS1 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.03□□□□□ -2.08
FOXP3Q9BZS1 AC096720.1-201ENST00000604441 183 ntBASIC2.03□□□□□ -2.08
FOXP3Q9BZS1 AC062037.1-201ENST00000605302 128 ntBASIC2.03□□□□□ -2.08
FOXP3Q9BZS1 AL773524.1-201ENST00000614065 229 ntBASIC2.03□□□□□ -2.08
FOXP3Q9BZS1 ZNF355P-201ENST00000427301 3216 ntBASIC2.02□□□□□ -2.09
FOXP3Q9BZS1 RNA5SP48-201ENST00000363969 126 ntBASIC2.02□□□□□ -2.09
FOXP3Q9BZS1 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
FOXP3Q9BZS1 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.02□□□□□ -2.09
FOXP3Q9BZS1 AL603825.1-201ENST00000438481 80 ntBASIC2.02□□□□□ -2.09
FOXP3Q9BZS1 Y_RNA.659-201ENST00000515994 113 ntBASIC2.02□□□□□ -2.09
FOXP3Q9BZS1 RNU7-79P-201ENST00000516082 62 ntBASIC2.02□□□□□ -2.09
FOXP3Q9BZS1 MIR5089-201ENST00000580047 84 ntBASIC2.02□□□□□ -2.09
FOXP3Q9BZS1 U7.3-201ENST00000616123 62 ntBASIC2.02□□□□□ -2.09
FOXP3Q9BZS1 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.02□□□□□ -2.09
FOXP3Q9BZS1 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
FOXP3Q9BZS1 SNORD38B-201ENST00000384690 67 ntBASIC2.01□□□□□ -2.09
FOXP3Q9BZS1 MIR450A2-201ENST00000385022 100 ntBASIC2.01□□□□□ -2.09
FOXP3Q9BZS1 RNU6-1307P-201ENST00000391012 103 ntBASIC2.01□□□□□ -2.09
FOXP3Q9BZS1 AC019129.1-201ENST00000403786 261 ntBASIC2.01□□□□□ -2.09
FOXP3Q9BZS1 AC244636.1-201ENST00000421152 228 ntBASIC2.01□□□□□ -2.09
FOXP3Q9BZS1 AC009474.2-201ENST00000451383 136 ntBASIC2.01□□□□□ -2.09
FOXP3Q9BZS1 UBL5P1-201ENST00000507979 193 ntBASIC2.01□□□□□ -2.09
FOXP3Q9BZS1 RNU6ATAC17P-201ENST00000516074 71 ntBASIC2.01□□□□□ -2.09
FOXP3Q9BZS1 SNORD67.1-201ENST00000516618 108 ntBASIC2.01□□□□□ -2.09
FOXP3Q9BZS1 RNU6-1006P-201ENST00000516998 103 ntBASIC2.01□□□□□ -2.09
FOXP3Q9BZS1 MIR4439-201ENST00000583746 80 ntBASIC2.01□□□□□ -2.09
FOXP3Q9BZS1 Y_RNA.783-201ENST00000613546 102 ntBASIC2.01□□□□□ -2.09
FOXP3Q9BZS1 SNORD38B-202ENST00000625943 69 ntBASIC2.01□□□□□ -2.09
FOXP3Q9BZS1 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms