Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 AC108667.1-201ENST00000428618 249 ntBASIC1.7□□□□□ -2.14
NDC1Q9BTX1 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.7□□□□□ -2.14
NDC1Q9BTX1 MIR548AO-201ENST00000579992 96 ntBASIC1.7□□□□□ -2.14
NDC1Q9BTX1 MIR3618-201ENST00000580330 88 ntBASIC1.7□□□□□ -2.14
NDC1Q9BTX1 MIR548AE2-201ENST00000583456 67 ntBASIC1.7□□□□□ -2.14
NDC1Q9BTX1 Y_RNA.773-201ENST00000607168 90 ntBASIC1.7□□□□□ -2.14
NDC1Q9BTX1 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
NDC1Q9BTX1 MIR4251-201ENST00000635819 61 ntBASIC1.7□□□□□ -2.14
NDC1Q9BTX1 Z97988.1-201ENST00000637697 135 ntBASIC1.7□□□□□ -2.14
NDC1Q9BTX1 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
NDC1Q9BTX1 SNORD1A-201ENST00000364968 72 ntBASIC1.69□□□□□ -2.14
NDC1Q9BTX1 RNA5SP190-201ENST00000365222 118 ntBASIC1.69□□□□□ -2.14
NDC1Q9BTX1 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.69□□□□□ -2.14
NDC1Q9BTX1 RPL39P25-201ENST00000449384 154 ntBASIC1.69□□□□□ -2.14
NDC1Q9BTX1 MIR1270-201ENST00000459320 83 ntBASIC1.69□□□□□ -2.14
NDC1Q9BTX1 AC079140.2-201ENST00000506193 142 ntBASIC1.69□□□□□ -2.14
NDC1Q9BTX1 SNORD111.1-201ENST00000516421 86 ntBASIC1.69□□□□□ -2.14
NDC1Q9BTX1 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.69□□□□□ -2.14
NDC1Q9BTX1 GHRLOS.1-201ENST00000610995 70 ntBASIC1.69□□□□□ -2.14
NDC1Q9BTX1 MIR1255B1-201ENST00000636325 63 ntBASIC1.69□□□□□ -2.14
NDC1Q9BTX1 MIR302D-201ENST00000362275 68 ntBASIC1.68□□□□□ -2.14
NDC1Q9BTX1 SNORD115-19-201ENST00000363098 82 ntBASIC1.68□□□□□ -2.14
NDC1Q9BTX1 SNORD115-18-201ENST00000363293 82 ntBASIC1.68□□□□□ -2.14
NDC1Q9BTX1 Y_RNA.164-201ENST00000363709 102 ntBASIC1.68□□□□□ -2.14
NDC1Q9BTX1 SNORD115-17-201ENST00000364612 82 ntBASIC1.68□□□□□ -2.14
NDC1Q9BTX1 SNORA32-201ENST00000384072 121 ntBASIC1.68□□□□□ -2.14
NDC1Q9BTX1 MIR1912-201ENST00000410389 80 ntBASIC1.68□□□□□ -2.14
NDC1Q9BTX1 RNU6-602P-201ENST00000411155 105 ntBASIC1.68□□□□□ -2.14
NDC1Q9BTX1 AC090844.1-201ENST00000422019 156 ntBASIC1.68□□□□□ -2.14
NDC1Q9BTX1 SNORD13-201ENST00000459299 104 ntBASIC1.68□□□□□ -2.14
NDC1Q9BTX1 RPS29P11-201ENST00000496507 171 ntBASIC1.68□□□□□ -2.14
NDC1Q9BTX1 RNU6-250P-201ENST00000516958 103 ntBASIC1.68□□□□□ -2.14
NDC1Q9BTX1 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.68□□□□□ -2.14
NDC1Q9BTX1 AC024614.2-201ENST00000577584 372 ntBASIC1.68□□□□□ -2.14
NDC1Q9BTX1 MIR502-201ENST00000606349 86 ntBASIC1.68□□□□□ -2.14
NDC1Q9BTX1 MIR8081-201ENST00000611533 95 ntBASIC1.68□□□□□ -2.14
NDC1Q9BTX1 RNU6-1065P-201ENST00000384513 106 ntBASIC1.67□□□□□ -2.14
NDC1Q9BTX1 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.67□□□□□ -2.14
NDC1Q9BTX1 SNORA19.1-201ENST00000410656 129 ntBASIC1.67□□□□□ -2.14
NDC1Q9BTX1 AC008834.1-201ENST00000511612 175 ntBASIC1.67□□□□□ -2.14
NDC1Q9BTX1 RNA5SP170-201ENST00000517150 101 ntBASIC1.67□□□□□ -2.14
NDC1Q9BTX1 RNU6-537P-201ENST00000517277 103 ntBASIC1.67□□□□□ -2.14
NDC1Q9BTX1 CYP3A52P-201ENST00000563326 91 ntBASIC1.67□□□□□ -2.14
NDC1Q9BTX1 MIR4419B-201ENST00000577260 68 ntBASIC1.67□□□□□ -2.14
NDC1Q9BTX1 MIR3192-201ENST00000584920 77 ntBASIC1.67□□□□□ -2.14
NDC1Q9BTX1 MIR8065-201ENST00000620577 100 ntBASIC1.67□□□□□ -2.14
NDC1Q9BTX1 Y_RNA.4-201ENST00000362333 112 ntBASIC1.66□□□□□ -2.14
NDC1Q9BTX1 Y_RNA.354-201ENST00000365448 111 ntBASIC1.66□□□□□ -2.14
NDC1Q9BTX1 RNU6-1113P-201ENST00000384348 107 ntBASIC1.66□□□□□ -2.14
NDC1Q9BTX1 RNU6-616P-201ENST00000384353 107 ntBASIC1.66□□□□□ -2.14
NDC1Q9BTX1 Y_RNA.507-201ENST00000384500 99 ntBASIC1.66□□□□□ -2.14
NDC1Q9BTX1 RNU6-342P-201ENST00000384521 104 ntBASIC1.66□□□□□ -2.14
NDC1Q9BTX1 SNORD77B-201ENST00000391112 67 ntBASIC1.66□□□□□ -2.14
NDC1Q9BTX1 SNORA17.3-201ENST00000391159 129 ntBASIC1.66□□□□□ -2.14
NDC1Q9BTX1 AC245047.7-201ENST00000440265 293 ntBASIC1.66□□□□□ -2.14
NDC1Q9BTX1 AC009474.2-201ENST00000451383 136 ntBASIC1.66□□□□□ -2.14
NDC1Q9BTX1 Y_RNA.677-201ENST00000516401 85 ntBASIC1.66□□□□□ -2.14
NDC1Q9BTX1 AC019176.1-201ENST00000518519 225 ntBASIC1.66□□□□□ -2.14
NDC1Q9BTX1 MIR3937-201ENST00000580135 106 ntBASIC1.66□□□□□ -2.14
NDC1Q9BTX1 AL096861.1-201ENST00000610899 123 ntBASIC1.66□□□□□ -2.14
NDC1Q9BTX1 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.66□□□□□ -2.14
NDC1Q9BTX1 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
NDC1Q9BTX1 RNU6-363P-201ENST00000362895 105 ntBASIC1.65□□□□□ -2.15
NDC1Q9BTX1 MIR590-201ENST00000385008 97 ntBASIC1.65□□□□□ -2.15
NDC1Q9BTX1 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.65□□□□□ -2.15
NDC1Q9BTX1 RPL39P39-201ENST00000455840 151 ntBASIC1.65□□□□□ -2.15
NDC1Q9BTX1 RNU6-1053P-201ENST00000515930 101 ntBASIC1.65□□□□□ -2.15
NDC1Q9BTX1 AC141557.1-201ENST00000540982 400 ntBASIC1.65□□□□□ -2.15
NDC1Q9BTX1 MIR3122-201ENST00000577243 73 ntBASIC1.65□□□□□ -2.15
NDC1Q9BTX1 MIR4498-201ENST00000577599 66 ntBASIC1.65□□□□□ -2.15
NDC1Q9BTX1 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
NDC1Q9BTX1 MIR378A-201ENST00000362177 66 ntBASIC1.64□□□□□ -2.15
NDC1Q9BTX1 Y_RNA.78-201ENST00000362970 110 ntBASIC1.64□□□□□ -2.15
NDC1Q9BTX1 Y_RNA.155-201ENST00000363632 101 ntBASIC1.64□□□□□ -2.15
NDC1Q9BTX1 RNA5SP48-201ENST00000363969 126 ntBASIC1.64□□□□□ -2.15
NDC1Q9BTX1 RNU4-67P-201ENST00000364569 141 ntBASIC1.64□□□□□ -2.15
NDC1Q9BTX1 AC012493.3-201ENST00000604494 112 ntBASIC1.64□□□□□ -2.15
NDC1Q9BTX1 AP001318.4-201ENST00000616637 121 ntBASIC1.64□□□□□ -2.15
NDC1Q9BTX1 Y_RNA.348-201ENST00000365403 103 ntBASIC1.63□□□□□ -2.15
NDC1Q9BTX1 SNORA18-201ENST00000384416 132 ntBASIC1.63□□□□□ -2.15
NDC1Q9BTX1 SNORD38B-201ENST00000384690 67 ntBASIC1.63□□□□□ -2.15
NDC1Q9BTX1 RNA5SP247-201ENST00000411181 105 ntBASIC1.63□□□□□ -2.15
NDC1Q9BTX1 AC027119.1-201ENST00000440877 241 ntBASIC1.63□□□□□ -2.15
NDC1Q9BTX1 RPL30P7-201ENST00000479312 323 ntBASIC1.63□□□□□ -2.15
NDC1Q9BTX1 RNA5SP445-201ENST00000515889 115 ntBASIC1.63□□□□□ -2.15
NDC1Q9BTX1 RNU6-947P-201ENST00000516264 106 ntBASIC1.63□□□□□ -2.15
NDC1Q9BTX1 RNU6-109P-201ENST00000516364 107 ntBASIC1.63□□□□□ -2.15
NDC1Q9BTX1 RNU6-184P-201ENST00000516514 107 ntBASIC1.63□□□□□ -2.15
NDC1Q9BTX1 SNORD38B-202ENST00000625943 69 ntBASIC1.63□□□□□ -2.15
NDC1Q9BTX1 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
NDC1Q9BTX1 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.62□□□□□ -2.15
NDC1Q9BTX1 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.62□□□□□ -2.15
NDC1Q9BTX1 Y_RNA.43-201ENST00000362670 111 ntBASIC1.62□□□□□ -2.15
NDC1Q9BTX1 Y_RNA.360-201ENST00000365512 102 ntBASIC1.62□□□□□ -2.15
NDC1Q9BTX1 RNU6-409P-201ENST00000384114 104 ntBASIC1.62□□□□□ -2.15
NDC1Q9BTX1 RNU6-905P-201ENST00000384434 107 ntBASIC1.62□□□□□ -2.15
NDC1Q9BTX1 MIR605-201ENST00000385078 83 ntBASIC1.62□□□□□ -2.15
NDC1Q9BTX1 RNU1-78P-201ENST00000391248 165 ntBASIC1.62□□□□□ -2.15
NDC1Q9BTX1 SNORA7.5-201ENST00000410672 110 ntBASIC1.62□□□□□ -2.15
NDC1Q9BTX1 RNU6-733P-201ENST00000410759 104 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 187.6 ms