Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 MIR4303-201ENST00000581299 66 ntBASIC1.38□□□□□ -2.19
VRK1Q99986 AC025166.1-201ENST00000612411 163 ntBASIC1.38□□□□□ -2.19
VRK1Q99986 MIR3914-2-201ENST00000637339 95 ntBASIC1.38□□□□□ -2.19
VRK1Q99986 AL161722.3-201ENST00000605789 2983 ntBASIC1.38□□□□□ -2.19
VRK1Q99986 RNA5SP327-201ENST00000362494 101 ntBASIC1.37□□□□□ -2.19
VRK1Q99986 Y_RNA.168-201ENST00000363740 102 ntBASIC1.37□□□□□ -2.19
VRK1Q99986 Y_RNA.198-201ENST00000364013 98 ntBASIC1.37□□□□□ -2.19
VRK1Q99986 RNU6-654P-201ENST00000364373 107 ntBASIC1.37□□□□□ -2.19
VRK1Q99986 Y_RNA.346-201ENST00000365385 112 ntBASIC1.37□□□□□ -2.19
VRK1Q99986 SNORA25-201ENST00000384384 134 ntBASIC1.37□□□□□ -2.19
VRK1Q99986 Y_RNA.563-201ENST00000384707 108 ntBASIC1.37□□□□□ -2.19
VRK1Q99986 SNORA19-201ENST00000384737 128 ntBASIC1.37□□□□□ -2.19
VRK1Q99986 SNORD12C-201ENST00000386307 89 ntBASIC1.37□□□□□ -2.19
VRK1Q99986 RNU6-1168P-201ENST00000390831 104 ntBASIC1.37□□□□□ -2.19
VRK1Q99986 MIR1263-201ENST00000408324 86 ntBASIC1.37□□□□□ -2.19
VRK1Q99986 RNU4-62P-201ENST00000410125 130 ntBASIC1.37□□□□□ -2.19
VRK1Q99986 BTF3P4-201ENST00000418852 495 ntBASIC1.37□□□□□ -2.19
VRK1Q99986 RNU7-90P-201ENST00000459216 62 ntBASIC1.37□□□□□ -2.19
VRK1Q99986 RNU1-42P-201ENST00000364033 160 ntBASIC1.36□□□□□ -2.19
VRK1Q99986 MIR563-201ENST00000385080 79 ntBASIC1.36□□□□□ -2.19
VRK1Q99986 SNORA67.6-201ENST00000391093 99 ntBASIC1.36□□□□□ -2.19
VRK1Q99986 MRPL35P3-201ENST00000421557 364 ntBASIC1.36□□□□□ -2.19
VRK1Q99986 RPS29P23-201ENST00000458635 123 ntBASIC1.36□□□□□ -2.19
VRK1Q99986 AC023790.1-201ENST00000482174 347 ntBASIC1.36□□□□□ -2.19
VRK1Q99986 RNU1-92P-201ENST00000517017 135 ntBASIC1.36□□□□□ -2.19
VRK1Q99986 BX248123.2-201ENST00000606318 124 ntBASIC1.36□□□□□ -2.19
VRK1Q99986 AL512598.1-201ENST00000610158 273 ntBASIC1.36□□□□□ -2.19
VRK1Q99986 AL365222.1-201ENST00000614661 98 ntBASIC1.36□□□□□ -2.19
VRK1Q99986 SNORD113.3-201ENST00000364630 78 ntBASIC1.35□□□□□ -2.19
VRK1Q99986 Y_RNA.330-201ENST00000365230 109 ntBASIC1.35□□□□□ -2.19
VRK1Q99986 Y_RNA.470-201ENST00000384307 117 ntBASIC1.35□□□□□ -2.19
VRK1Q99986 Y_RNA.528-201ENST00000384575 108 ntBASIC1.35□□□□□ -2.19
VRK1Q99986 SNORD111-201ENST00000408139 94 ntBASIC1.35□□□□□ -2.19
VRK1Q99986 RPS23P4-201ENST00000487908 423 ntBASIC1.35□□□□□ -2.19
VRK1Q99986 RNA5SP33-201ENST00000516687 98 ntBASIC1.35□□□□□ -2.19
VRK1Q99986 AC036111.3-201ENST00000526389 112 ntBASIC1.35□□□□□ -2.19
VRK1Q99986 AC027335.2-201ENST00000624030 375 ntBASIC1.35□□□□□ -2.19
VRK1Q99986 U2.22-201ENST00000636441 106 ntBASIC1.35□□□□□ -2.19
VRK1Q99986 U6.95-201ENST00000636931 70 ntBASIC1.35□□□□□ -2.19
VRK1Q99986 Y_RNA.164-201ENST00000363709 102 ntBASIC1.34□□□□□ -2.19
VRK1Q99986 MIR588-201ENST00000384900 83 ntBASIC1.34□□□□□ -2.19
VRK1Q99986 MIR759-201ENST00000390224 91 ntBASIC1.34□□□□□ -2.19
VRK1Q99986 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
VRK1Q99986 Y_RNA.630-201ENST00000411370 108 ntBASIC1.34□□□□□ -2.19
VRK1Q99986 RNU6-1053P-201ENST00000515930 101 ntBASIC1.34□□□□□ -2.19
VRK1Q99986 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.34□□□□□ -2.19
VRK1Q99986 MIR4255-201ENST00000579351 72 ntBASIC1.34□□□□□ -2.19
VRK1Q99986 AC106800.4-201ENST00000614905 153 ntBASIC1.34□□□□□ -2.19
VRK1Q99986 MTND5P18-201ENST00000445624 1801 ntBASIC1.33□□□□□ -2.2
VRK1Q99986 Y_RNA.213-201ENST00000364178 111 ntBASIC1.33□□□□□ -2.2
VRK1Q99986 RNA5SP205-201ENST00000364653 136 ntBASIC1.33□□□□□ -2.2
VRK1Q99986 RNU6-60P-201ENST00000364792 103 ntBASIC1.33□□□□□ -2.2
VRK1Q99986 Y_RNA.525-201ENST00000384570 113 ntBASIC1.33□□□□□ -2.2
VRK1Q99986 RNU6-1104P-201ENST00000384723 104 ntBASIC1.33□□□□□ -2.2
VRK1Q99986 RNU6-205P-201ENST00000390858 107 ntBASIC1.33□□□□□ -2.2
VRK1Q99986 RNU4-69P-201ENST00000410677 143 ntBASIC1.33□□□□□ -2.2
VRK1Q99986 RNU6-1086P-201ENST00000410930 100 ntBASIC1.33□□□□□ -2.2
VRK1Q99986 RNU7-62P-201ENST00000458856 62 ntBASIC1.33□□□□□ -2.2
VRK1Q99986 RNU6-313P-201ENST00000516317 112 ntBASIC1.33□□□□□ -2.2
VRK1Q99986 MIR4498-201ENST00000577599 66 ntBASIC1.33□□□□□ -2.2
VRK1Q99986 AL645939.4-201ENST00000604495 135 ntBASIC1.33□□□□□ -2.2
VRK1Q99986 snoU13.31-201ENST00000607291 104 ntBASIC1.33□□□□□ -2.2
VRK1Q99986 MIR6740-201ENST00000618268 113 ntBASIC1.33□□□□□ -2.2
VRK1Q99986 Y_RNA.261-201ENST00000364631 102 ntBASIC1.32□□□□□ -2.2
VRK1Q99986 SNORA18-201ENST00000384416 132 ntBASIC1.32□□□□□ -2.2
VRK1Q99986 SNORA2B-201ENST00000384583 137 ntBASIC1.32□□□□□ -2.2
VRK1Q99986 MIR150-201ENST00000385048 84 ntBASIC1.32□□□□□ -2.2
VRK1Q99986 MIR517C-201ENST00000385103 95 ntBASIC1.32□□□□□ -2.2
VRK1Q99986 MIR320A-201ENST00000385302 82 ntBASIC1.32□□□□□ -2.2
VRK1Q99986 RNU6-1154P-201ENST00000391001 104 ntBASIC1.32□□□□□ -2.2
VRK1Q99986 RNA5SP95-201ENST00000410319 137 ntBASIC1.32□□□□□ -2.2
VRK1Q99986 RNU2-51P-201ENST00000410708 197 ntBASIC1.32□□□□□ -2.2
VRK1Q99986 AP1B1P2-201ENST00000416196 106 ntBASIC1.32□□□□□ -2.2
VRK1Q99986 AC002429.1-201ENST00000437672 148 ntBASIC1.32□□□□□ -2.2
VRK1Q99986 RNU7-35P-201ENST00000517174 62 ntBASIC1.32□□□□□ -2.2
VRK1Q99986 AC022523.2-201ENST00000561045 150 ntBASIC1.32□□□□□ -2.2
VRK1Q99986 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.32□□□□□ -2.2
VRK1Q99986 AL662814.1-201ENST00000617364 121 ntBASIC1.32□□□□□ -2.2
VRK1Q99986 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
VRK1Q99986 AC008163.1-202ENST00000636004 2889 ntBASIC1.31□□□□□ -2.2
VRK1Q99986 RNU6-342P-201ENST00000384521 104 ntBASIC1.31□□□□□ -2.2
VRK1Q99986 MIR19B1-201ENST00000384829 87 ntBASIC1.31□□□□□ -2.2
VRK1Q99986 MIR222-201ENST00000384992 110 ntBASIC1.31□□□□□ -2.2
VRK1Q99986 MIR548I2-201ENST00000408348 149 ntBASIC1.31□□□□□ -2.2
VRK1Q99986 RNU6-1165P-201ENST00000410119 107 ntBASIC1.31□□□□□ -2.2
VRK1Q99986 AC063976.4-201ENST00000421971 163 ntBASIC1.31□□□□□ -2.2
VRK1Q99986 SNORA31.24-201ENST00000517232 57 ntBASIC1.31□□□□□ -2.2
VRK1Q99986 MIR3163-201ENST00000581592 73 ntBASIC1.31□□□□□ -2.2
VRK1Q99986 MIR548AE2-201ENST00000583456 67 ntBASIC1.31□□□□□ -2.2
VRK1Q99986 AC012676.2-201ENST00000619258 186 ntBASIC1.31□□□□□ -2.2
VRK1Q99986 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
VRK1Q99986 RNU6-1081P-201ENST00000384537 107 ntBASIC1.3□□□□□ -2.2
VRK1Q99986 SNORA22C-201ENST00000384614 134 ntBASIC1.3□□□□□ -2.2
VRK1Q99986 MT-TF-201ENST00000387314 71 ntBASIC1.3□□□□□ -2.2
VRK1Q99986 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.3□□□□□ -2.2
VRK1Q99986 MIR1323-201ENST00000408090 73 ntBASIC1.3□□□□□ -2.2
VRK1Q99986 MIR1304-201ENST00000408243 91 ntBASIC1.3□□□□□ -2.2
VRK1Q99986 RNA5SP237-201ENST00000410414 113 ntBASIC1.3□□□□□ -2.2
VRK1Q99986 MIR18B-201ENST00000454574 71 ntBASIC1.3□□□□□ -2.2
VRK1Q99986 RNU7-95P-201ENST00000459222 64 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms