Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC108729.3-201ENST00000513484 108 ntBASIC2.02□□□□□ -2.09
CDK5RAP1Q96SZ6 RNU6-857P-201ENST00000515893 110 ntBASIC2.02□□□□□ -2.09
CDK5RAP1Q96SZ6 SNORA28-201ENST00000606769 126 ntBASIC2.02□□□□□ -2.09
CDK5RAP1Q96SZ6 AP000648.3-201ENST00000623539 4507 ntBASIC2.01□□□□□ -2.09
CDK5RAP1Q96SZ6 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CDK5RAP1Q96SZ6 RNU6-1163P-201ENST00000364516 107 ntBASIC2.01□□□□□ -2.09
CDK5RAP1Q96SZ6 SNORA1.1-201ENST00000364671 133 ntBASIC2.01□□□□□ -2.09
CDK5RAP1Q96SZ6 SNORD58A-201ENST00000383875 65 ntBASIC2.01□□□□□ -2.09
CDK5RAP1Q96SZ6 RNU6-1031P-201ENST00000384773 107 ntBASIC2.01□□□□□ -2.09
CDK5RAP1Q96SZ6 RNU11-3P-201ENST00000391111 133 ntBASIC2.01□□□□□ -2.09
CDK5RAP1Q96SZ6 SNORD77B-201ENST00000391112 67 ntBASIC2.01□□□□□ -2.09
CDK5RAP1Q96SZ6 MIR1283-2-201ENST00000408621 87 ntBASIC2.01□□□□□ -2.09
CDK5RAP1Q96SZ6 RPS29P29-201ENST00000456396 171 ntBASIC2.01□□□□□ -2.09
CDK5RAP1Q96SZ6 RNU6-1006P-201ENST00000516998 103 ntBASIC2.01□□□□□ -2.09
CDK5RAP1Q96SZ6 AC005786.1-201ENST00000588553 154 ntBASIC2.01□□□□□ -2.09
CDK5RAP1Q96SZ6 AL020996.3-201ENST00000606617 222 ntBASIC2.01□□□□□ -2.09
CDK5RAP1Q96SZ6 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.01□□□□□ -2.09
CDK5RAP1Q96SZ6 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
CDK5RAP1Q96SZ6 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
CDK5RAP1Q96SZ6 SNORD115-27-201ENST00000364430 82 ntBASIC2□□□□□ -2.09
CDK5RAP1Q96SZ6 MIR34C-201ENST00000384831 77 ntBASIC2□□□□□ -2.09
CDK5RAP1Q96SZ6 U8.13-201ENST00000390842 128 ntBASIC2□□□□□ -2.09
CDK5RAP1Q96SZ6 RNU6-279P-201ENST00000391297 101 ntBASIC2□□□□□ -2.09
CDK5RAP1Q96SZ6 MIR889-201ENST00000401280 79 ntBASIC2□□□□□ -2.09
CDK5RAP1Q96SZ6 AL034345.1-201ENST00000407768 123 ntBASIC2□□□□□ -2.09
CDK5RAP1Q96SZ6 AL445685.2-201ENST00000422551 342 ntBASIC2□□□□□ -2.09
CDK5RAP1Q96SZ6 SNORD123-201ENST00000459473 70 ntBASIC2□□□□□ -2.09
CDK5RAP1Q96SZ6 RNU7-171P-201ENST00000459581 62 ntBASIC2□□□□□ -2.09
CDK5RAP1Q96SZ6 RNU6-295P-201ENST00000516901 104 ntBASIC2□□□□□ -2.09
CDK5RAP1Q96SZ6 AC026271.5-201ENST00000577873 130 ntBASIC2□□□□□ -2.09
CDK5RAP1Q96SZ6 MIR4666B-201ENST00000578142 81 ntBASIC2□□□□□ -2.09
CDK5RAP1Q96SZ6 AC021506.2-201ENST00000612354 169 ntBASIC2□□□□□ -2.09
CDK5RAP1Q96SZ6 AC243994.1-201ENST00000618627 109 ntBASIC2□□□□□ -2.09
CDK5RAP1Q96SZ6 AC006160.2-201ENST00000637708 154 ntBASIC2□□□□□ -2.09
CDK5RAP1Q96SZ6 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
CDK5RAP1Q96SZ6 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.99□□□□□ -2.09
CDK5RAP1Q96SZ6 RNA5SP160-201ENST00000364866 120 ntBASIC1.99□□□□□ -2.09
CDK5RAP1Q96SZ6 RNU6-652P-201ENST00000365488 107 ntBASIC1.99□□□□□ -2.09
CDK5RAP1Q96SZ6 MIR206-201ENST00000384872 86 ntBASIC1.99□□□□□ -2.09
CDK5RAP1Q96SZ6 SNORA26.9-201ENST00000391322 122 ntBASIC1.99□□□□□ -2.09
CDK5RAP1Q96SZ6 MIR1289-2-201ENST00000408360 111 ntBASIC1.99□□□□□ -2.09
CDK5RAP1Q96SZ6 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.99□□□□□ -2.09
CDK5RAP1Q96SZ6 AC099513.1-201ENST00000490423 301 ntBASIC1.99□□□□□ -2.09
CDK5RAP1Q96SZ6 RNU6-1018P-201ENST00000516577 106 ntBASIC1.99□□□□□ -2.09
CDK5RAP1Q96SZ6 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.99□□□□□ -2.09
CDK5RAP1Q96SZ6 DEFB122-202ENST00000569013 197 ntBASIC1.99□□□□□ -2.09
CDK5RAP1Q96SZ6 AC105081.1-201ENST00000617727 106 ntBASIC1.99□□□□□ -2.09
CDK5RAP1Q96SZ6 MIR7843-201ENST00000622274 79 ntBASIC1.99□□□□□ -2.09
CDK5RAP1Q96SZ6 MIR548BB-201ENST00000626714 66 ntBASIC1.99□□□□□ -2.09
CDK5RAP1Q96SZ6 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.99□□□□□ -2.09
CDK5RAP1Q96SZ6 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
CDK5RAP1Q96SZ6 SNORA24-201ENST00000384096 131 ntBASIC1.98□□□□□ -2.09
CDK5RAP1Q96SZ6 MIR136-201ENST00000385207 82 ntBASIC1.98□□□□□ -2.09
CDK5RAP1Q96SZ6 Y_RNA.609-201ENST00000410669 89 ntBASIC1.98□□□□□ -2.09
CDK5RAP1Q96SZ6 AC245047.7-201ENST00000440265 293 ntBASIC1.98□□□□□ -2.09
CDK5RAP1Q96SZ6 MIR3152-201ENST00000579801 74 ntBASIC1.98□□□□□ -2.09
CDK5RAP1Q96SZ6 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
CDK5RAP1Q96SZ6 Y_RNA.140-201ENST00000363474 103 ntBASIC1.97□□□□□ -2.09
CDK5RAP1Q96SZ6 RNU6-457P-201ENST00000363999 107 ntBASIC1.97□□□□□ -2.09
CDK5RAP1Q96SZ6 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
CDK5RAP1Q96SZ6 snoU13.23-201ENST00000458863 104 ntBASIC1.97□□□□□ -2.09
CDK5RAP1Q96SZ6 RNU7-2P-201ENST00000516096 62 ntBASIC1.97□□□□□ -2.09
CDK5RAP1Q96SZ6 SNORD67.1-201ENST00000516618 108 ntBASIC1.97□□□□□ -2.09
CDK5RAP1Q96SZ6 RNU7-53P-201ENST00000516705 60 ntBASIC1.97□□□□□ -2.09
CDK5RAP1Q96SZ6 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.97□□□□□ -2.09
CDK5RAP1Q96SZ6 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.97□□□□□ -2.09
CDK5RAP1Q96SZ6 MIR4299-201ENST00000577899 72 ntBASIC1.97□□□□□ -2.09
CDK5RAP1Q96SZ6 MIR3935-201ENST00000583472 104 ntBASIC1.97□□□□□ -2.09
CDK5RAP1Q96SZ6 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.97□□□□□ -2.09
CDK5RAP1Q96SZ6 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
CDK5RAP1Q96SZ6 SNORA1.2-201ENST00000365189 134 ntBASIC1.96□□□□□ -2.1
CDK5RAP1Q96SZ6 MIR452-201ENST00000385020 85 ntBASIC1.96□□□□□ -2.1
CDK5RAP1Q96SZ6 MIR676-201ENST00000390702 67 ntBASIC1.96□□□□□ -2.1
CDK5RAP1Q96SZ6 RPL23AP6-201ENST00000446637 472 ntBASIC1.96□□□□□ -2.1
CDK5RAP1Q96SZ6 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.96□□□□□ -2.1
CDK5RAP1Q96SZ6 DNAJC19P9-201ENST00000555084 351 ntBASIC1.96□□□□□ -2.1
CDK5RAP1Q96SZ6 FAM106DP-201ENST00000586416 501 ntBASIC1.96□□□□□ -2.1
CDK5RAP1Q96SZ6 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CDK5RAP1Q96SZ6 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
CDK5RAP1Q96SZ6 Y_RNA.430-201ENST00000384081 110 ntBASIC1.95□□□□□ -2.1
CDK5RAP1Q96SZ6 Y_RNA.448-201ENST00000384185 108 ntBASIC1.95□□□□□ -2.1
CDK5RAP1Q96SZ6 RNU6-1321P-201ENST00000390905 107 ntBASIC1.95□□□□□ -2.1
CDK5RAP1Q96SZ6 RNA5SP450-201ENST00000411206 102 ntBASIC1.95□□□□□ -2.1
CDK5RAP1Q96SZ6 RNU7-73P-201ENST00000458743 63 ntBASIC1.95□□□□□ -2.1
CDK5RAP1Q96SZ6 AC096720.1-201ENST00000604441 183 ntBASIC1.95□□□□□ -2.1
CDK5RAP1Q96SZ6 AL773524.1-201ENST00000614065 229 ntBASIC1.95□□□□□ -2.1
CDK5RAP1Q96SZ6 MIR8065-201ENST00000620577 100 ntBASIC1.95□□□□□ -2.1
CDK5RAP1Q96SZ6 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.95□□□□□ -2.1
CDK5RAP1Q96SZ6 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
CDK5RAP1Q96SZ6 RNU6-509P-201ENST00000363519 107 ntBASIC1.94□□□□□ -2.1
CDK5RAP1Q96SZ6 SNORD116-10-201ENST00000363791 102 ntBASIC1.94□□□□□ -2.1
CDK5RAP1Q96SZ6 SNORA70.7-201ENST00000384159 133 ntBASIC1.94□□□□□ -2.1
CDK5RAP1Q96SZ6 RNU6-296P-201ENST00000384608 107 ntBASIC1.94□□□□□ -2.1
CDK5RAP1Q96SZ6 RNU6-1237P-201ENST00000384777 107 ntBASIC1.94□□□□□ -2.1
CDK5RAP1Q96SZ6 MIR518A2-201ENST00000384966 87 ntBASIC1.94□□□□□ -2.1
CDK5RAP1Q96SZ6 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
CDK5RAP1Q96SZ6 RNU6-613P-201ENST00000410412 108 ntBASIC1.94□□□□□ -2.1
CDK5RAP1Q96SZ6 RNU2-7P-201ENST00000410794 178 ntBASIC1.94□□□□□ -2.1
CDK5RAP1Q96SZ6 RNA5SP501-201ENST00000410990 112 ntBASIC1.94□□□□□ -2.1
CDK5RAP1Q96SZ6 HMGN2P19-201ENST00000425149 265 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms