Protein–RNA interactions for Protein: Q96NZ1

FOXN4, Forkhead box protein N4, humanhuman

Predictions only

Length 517 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4Q96NZ1 RNU6-313P-201ENST00000516317 112 ntBASIC1.03□□□□□ -2.24
FOXN4Q96NZ1 RNU6-659P-201ENST00000516454 104 ntBASIC1.03□□□□□ -2.24
FOXN4Q96NZ1 MIR548AO-201ENST00000579992 96 ntBASIC1.03□□□□□ -2.24
FOXN4Q96NZ1 AL137067.1-201ENST00000615933 120 ntBASIC1.03□□□□□ -2.24
FOXN4Q96NZ1 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.03□□□□□ -2.24
FOXN4Q96NZ1 MIR4251-201ENST00000635819 61 ntBASIC1.03□□□□□ -2.24
FOXN4Q96NZ1 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.03□□□□□ -2.25
FOXN4Q96NZ1 SNORD58C-201ENST00000365223 64 ntBASIC1.02□□□□□ -2.25
FOXN4Q96NZ1 Y_RNA.617-201ENST00000410920 90 ntBASIC1.02□□□□□ -2.25
FOXN4Q96NZ1 RNU6-479P-201ENST00000516348 105 ntBASIC1.02□□□□□ -2.25
FOXN4Q96NZ1 RNU6-113P-201ENST00000516653 101 ntBASIC1.02□□□□□ -2.25
FOXN4Q96NZ1 RNU7-53P-201ENST00000516705 60 ntBASIC1.02□□□□□ -2.25
FOXN4Q96NZ1 AC021443.1-201ENST00000604478 211 ntBASIC1.02□□□□□ -2.25
FOXN4Q96NZ1 AC021613.1-201ENST00000623880 111 ntBASIC1.02□□□□□ -2.25
FOXN4Q96NZ1 MIR96-201ENST00000362288 78 ntBASIC1.01□□□□□ -2.25
FOXN4Q96NZ1 Y_RNA.291-201ENST00000364886 113 ntBASIC1.01□□□□□ -2.25
FOXN4Q96NZ1 RNU7-73P-201ENST00000458743 63 ntBASIC1.01□□□□□ -2.25
FOXN4Q96NZ1 snoU13.25-201ENST00000458945 104 ntBASIC1.01□□□□□ -2.25
FOXN4Q96NZ1 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.01□□□□□ -2.25
FOXN4Q96NZ1 SNORA4-201ENST00000584302 138 ntBASIC1.01□□□□□ -2.25
FOXN4Q96NZ1 AL357312.1-201ENST00000603879 298 ntBASIC1.01□□□□□ -2.25
FOXN4Q96NZ1 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
FOXN4Q96NZ1 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
FOXN4Q96NZ1 SNORD114-27-201ENST00000363766 70 ntBASIC1□□□□□ -2.25
FOXN4Q96NZ1 RNU6-1081P-201ENST00000384537 107 ntBASIC1□□□□□ -2.25
FOXN4Q96NZ1 SNORA26.6-201ENST00000391256 115 ntBASIC1□□□□□ -2.25
FOXN4Q96NZ1 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1□□□□□ -2.25
FOXN4Q96NZ1 RNU7-164P-201ENST00000459221 62 ntBASIC1□□□□□ -2.25
FOXN4Q96NZ1 snoU13.16-201ENST00000459350 104 ntBASIC1□□□□□ -2.25
FOXN4Q96NZ1 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1□□□□□ -2.25
FOXN4Q96NZ1 RNU7-123P-201ENST00000515911 60 ntBASIC1□□□□□ -2.25
FOXN4Q96NZ1 RNU2-35P-201ENST00000516446 142 ntBASIC1□□□□□ -2.25
FOXN4Q96NZ1 RNY4P20-201ENST00000516678 93 ntBASIC1□□□□□ -2.25
FOXN4Q96NZ1 RNA5SP404-201ENST00000517118 132 ntBASIC1□□□□□ -2.25
FOXN4Q96NZ1 RNU6-165P-201ENST00000517170 99 ntBASIC1□□□□□ -2.25
FOXN4Q96NZ1 AL512310.8-201ENST00000550183 120 ntBASIC1□□□□□ -2.25
FOXN4Q96NZ1 MIR3664-201ENST00000579074 99 ntBASIC1□□□□□ -2.25
FOXN4Q96NZ1 MIR548AI-201ENST00000579940 88 ntBASIC1□□□□□ -2.25
FOXN4Q96NZ1 MIR4305-201ENST00000583252 102 ntBASIC1□□□□□ -2.25
FOXN4Q96NZ1 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1□□□□□ -2.25
FOXN4Q96NZ1 AL359881.1-201ENST00000602916 267 ntBASIC1□□□□□ -2.25
FOXN4Q96NZ1 AL078603.1-201ENST00000603824 313 ntBASIC1□□□□□ -2.25
FOXN4Q96NZ1 AL020996.3-201ENST00000606617 222 ntBASIC1□□□□□ -2.25
FOXN4Q96NZ1 AC025166.1-201ENST00000612411 163 ntBASIC1□□□□□ -2.25
FOXN4Q96NZ1 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1□□□□□ -2.25
FOXN4Q96NZ1 MIR6717-201ENST00000622747 73 ntBASIC1□□□□□ -2.25
FOXN4Q96NZ1 RNU6-1290P-201ENST00000362957 109 ntBASIC0.99□□□□□ -2.25
FOXN4Q96NZ1 RNA5SP205-201ENST00000364653 136 ntBASIC0.99□□□□□ -2.25
FOXN4Q96NZ1 Y_RNA.528-201ENST00000384575 108 ntBASIC0.99□□□□□ -2.25
FOXN4Q96NZ1 RNU6-1319P-201ENST00000390855 104 ntBASIC0.99□□□□□ -2.25
FOXN4Q96NZ1 RNU6-747P-201ENST00000390928 104 ntBASIC0.99□□□□□ -2.25
FOXN4Q96NZ1 RNU6-241P-201ENST00000391148 104 ntBASIC0.99□□□□□ -2.25
FOXN4Q96NZ1 RNA5SP144-201ENST00000410846 116 ntBASIC0.99□□□□□ -2.25
FOXN4Q96NZ1 RNU6-177P-201ENST00000411257 104 ntBASIC0.99□□□□□ -2.25
FOXN4Q96NZ1 AL591704.2-201ENST00000421658 181 ntBASIC0.99□□□□□ -2.25
FOXN4Q96NZ1 AC090844.1-201ENST00000422019 156 ntBASIC0.99□□□□□ -2.25
FOXN4Q96NZ1 RPL39P39-201ENST00000455840 151 ntBASIC0.99□□□□□ -2.25
FOXN4Q96NZ1 RNU6-1258P-201ENST00000516911 111 ntBASIC0.99□□□□□ -2.25
FOXN4Q96NZ1 AC022523.2-201ENST00000561045 150 ntBASIC0.99□□□□□ -2.25
FOXN4Q96NZ1 MIR4295-201ENST00000585286 85 ntBASIC0.99□□□□□ -2.25
FOXN4Q96NZ1 MIR8055-201ENST00000610739 97 ntBASIC0.99□□□□□ -2.25
FOXN4Q96NZ1 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.98□□□□□ -2.25
FOXN4Q96NZ1 Y_RNA.171-201ENST00000363760 102 ntBASIC0.98□□□□□ -2.25
FOXN4Q96NZ1 SNORA1.1-201ENST00000364671 133 ntBASIC0.98□□□□□ -2.25
FOXN4Q96NZ1 Y_RNA.298-201ENST00000364960 107 ntBASIC0.98□□□□□ -2.25
FOXN4Q96NZ1 SNORA22-201ENST00000383907 134 ntBASIC0.98□□□□□ -2.25
FOXN4Q96NZ1 RNU6-42P-201ENST00000384165 107 ntBASIC0.98□□□□□ -2.25
FOXN4Q96NZ1 POLR2J4-204ENST00000418424 324 ntBASIC0.98□□□□□ -2.25
FOXN4Q96NZ1 AL512326.2-201ENST00000426359 151 ntBASIC0.98□□□□□ -2.25
FOXN4Q96NZ1 AC087343.1-201ENST00000477341 475 ntBASIC0.98□□□□□ -2.25
FOXN4Q96NZ1 SNORD33.1-201ENST00000516213 88 ntBASIC0.98□□□□□ -2.25
FOXN4Q96NZ1 RN7SKP88-201ENST00000516847 250 ntBASIC0.98□□□□□ -2.25
FOXN4Q96NZ1 Y_RNA.712-201ENST00000517011 92 ntBASIC0.98□□□□□ -2.25
FOXN4Q96NZ1 MIR3152-201ENST00000579801 74 ntBASIC0.98□□□□□ -2.25
FOXN4Q96NZ1 7SK.8-201ENST00000612110 250 ntBASIC0.98□□□□□ -2.25
FOXN4Q96NZ1 7SK.11-201ENST00000615477 250 ntBASIC0.98□□□□□ -2.25
FOXN4Q96NZ1 7SK.13-201ENST00000622040 250 ntBASIC0.98□□□□□ -2.25
FOXN4Q96NZ1 MIR3914-2-201ENST00000637339 95 ntBASIC0.98□□□□□ -2.25
FOXN4Q96NZ1 MTND5P18-201ENST00000445624 1801 ntBASIC0.98□□□□□ -2.25
FOXN4Q96NZ1 SNORA22.1-201ENST00000362701 134 ntBASIC0.97□□□□□ -2.25
FOXN4Q96NZ1 RNA5SP48-201ENST00000363969 126 ntBASIC0.97□□□□□ -2.25
FOXN4Q96NZ1 RNU6-1104P-201ENST00000384723 104 ntBASIC0.97□□□□□ -2.25
FOXN4Q96NZ1 MIRLET7F2-201ENST00000385277 83 ntBASIC0.97□□□□□ -2.25
FOXN4Q96NZ1 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
FOXN4Q96NZ1 MIR1302-7-201ENST00000408841 72 ntBASIC0.97□□□□□ -2.25
FOXN4Q96NZ1 RNU6-735P-201ENST00000410612 107 ntBASIC0.97□□□□□ -2.25
FOXN4Q96NZ1 AL022718.1-201ENST00000412004 84 ntBASIC0.97□□□□□ -2.25
FOXN4Q96NZ1 RPS3AP1-201ENST00000413190 320 ntBASIC0.97□□□□□ -2.25
FOXN4Q96NZ1 snoU13.18-201ENST00000459483 104 ntBASIC0.97□□□□□ -2.25
FOXN4Q96NZ1 RNA5SP220-201ENST00000516298 104 ntBASIC0.97□□□□□ -2.25
FOXN4Q96NZ1 MTND5P34-201ENST00000568888 325 ntBASIC0.97□□□□□ -2.25
FOXN4Q96NZ1 PRELID3BP2-201ENST00000605362 201 ntBASIC0.97□□□□□ -2.25
FOXN4Q96NZ1 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.97□□□□□ -2.25
FOXN4Q96NZ1 AC012676.2-201ENST00000619258 186 ntBASIC0.97□□□□□ -2.25
FOXN4Q96NZ1 Y_RNA.470-201ENST00000384307 117 ntBASIC0.96□□□□□ -2.26
FOXN4Q96NZ1 MIR548A1-201ENST00000385041 97 ntBASIC0.96□□□□□ -2.26
FOXN4Q96NZ1 MT-TI-201ENST00000387365 69 ntBASIC0.96□□□□□ -2.26
FOXN4Q96NZ1 RNU6-602P-201ENST00000411155 105 ntBASIC0.96□□□□□ -2.26
FOXN4Q96NZ1 UBL5P1-201ENST00000507979 193 ntBASIC0.96□□□□□ -2.26
FOXN4Q96NZ1 AC004812.1-201ENST00000540773 146 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 190.5 ms