Protein–RNA interactions for Protein: Q96JY6

PDLIM2, PDZ and LIM domain protein 2, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2Q96JY6 AC244636.1-201ENST00000421152 228 ntBASIC1.63□□□□□ -2.15
PDLIM2Q96JY6 AC023790.1-201ENST00000482174 347 ntBASIC1.63□□□□□ -2.15
PDLIM2Q96JY6 Y_RNA.773-201ENST00000607168 90 ntBASIC1.63□□□□□ -2.15
PDLIM2Q96JY6 MIR8055-201ENST00000610739 97 ntBASIC1.63□□□□□ -2.15
PDLIM2Q96JY6 MIR1255B1-201ENST00000636325 63 ntBASIC1.63□□□□□ -2.15
PDLIM2Q96JY6 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
PDLIM2Q96JY6 Y_RNA.155-201ENST00000363632 101 ntBASIC1.62□□□□□ -2.15
PDLIM2Q96JY6 SNORA32-201ENST00000384072 121 ntBASIC1.62□□□□□ -2.15
PDLIM2Q96JY6 MIR590-201ENST00000385008 97 ntBASIC1.62□□□□□ -2.15
PDLIM2Q96JY6 SNORD77B-201ENST00000391112 67 ntBASIC1.62□□□□□ -2.15
PDLIM2Q96JY6 RNU1-98P-201ENST00000458992 160 ntBASIC1.62□□□□□ -2.15
PDLIM2Q96JY6 SNORA25.15-201ENST00000516487 89 ntBASIC1.62□□□□□ -2.15
PDLIM2Q96JY6 AC015712.3-201ENST00000559380 164 ntBASIC1.62□□□□□ -2.15
PDLIM2Q96JY6 MIR4769-201ENST00000584126 77 ntBASIC1.62□□□□□ -2.15
PDLIM2Q96JY6 AP001318.4-201ENST00000616637 121 ntBASIC1.62□□□□□ -2.15
PDLIM2Q96JY6 WWP1P1-201ENST00000466609 2769 ntBASIC1.61□□□□□ -2.15
PDLIM2Q96JY6 SNORD115-19-201ENST00000363098 82 ntBASIC1.61□□□□□ -2.15
PDLIM2Q96JY6 SNORD115-18-201ENST00000363293 82 ntBASIC1.61□□□□□ -2.15
PDLIM2Q96JY6 SNORD115-17-201ENST00000364612 82 ntBASIC1.61□□□□□ -2.15
PDLIM2Q96JY6 Y_RNA.544-201ENST00000384650 113 ntBASIC1.61□□□□□ -2.15
PDLIM2Q96JY6 MIR1323-201ENST00000408090 73 ntBASIC1.61□□□□□ -2.15
PDLIM2Q96JY6 AC108210.2-201ENST00000503681 201 ntBASIC1.61□□□□□ -2.15
PDLIM2Q96JY6 RNU6-109P-201ENST00000516364 107 ntBASIC1.61□□□□□ -2.15
PDLIM2Q96JY6 RNU6-184P-201ENST00000516514 107 ntBASIC1.61□□□□□ -2.15
PDLIM2Q96JY6 MIR5582-201ENST00000579697 68 ntBASIC1.61□□□□□ -2.15
PDLIM2Q96JY6 BX248123.2-201ENST00000606318 124 ntBASIC1.61□□□□□ -2.15
PDLIM2Q96JY6 MIR4251-201ENST00000635819 61 ntBASIC1.61□□□□□ -2.15
PDLIM2Q96JY6 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
PDLIM2Q96JY6 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
PDLIM2Q96JY6 RNU6-363P-201ENST00000362895 105 ntBASIC1.6□□□□□ -2.15
PDLIM2Q96JY6 Y_RNA.78-201ENST00000362970 110 ntBASIC1.6□□□□□ -2.15
PDLIM2Q96JY6 Y_RNA.348-201ENST00000365403 103 ntBASIC1.6□□□□□ -2.15
PDLIM2Q96JY6 Y_RNA.354-201ENST00000365448 111 ntBASIC1.6□□□□□ -2.15
PDLIM2Q96JY6 RNU6-616P-201ENST00000384353 107 ntBASIC1.6□□□□□ -2.15
PDLIM2Q96JY6 RNU6-905P-201ENST00000384434 107 ntBASIC1.6□□□□□ -2.15
PDLIM2Q96JY6 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
PDLIM2Q96JY6 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.6□□□□□ -2.15
PDLIM2Q96JY6 HMGN2P23-201ENST00000456759 269 ntBASIC1.6□□□□□ -2.15
PDLIM2Q96JY6 RNU7-41P-201ENST00000515917 61 ntBASIC1.6□□□□□ -2.15
PDLIM2Q96JY6 RNU6-922P-201ENST00000516753 99 ntBASIC1.6□□□□□ -2.15
PDLIM2Q96JY6 MIR4299-201ENST00000577899 72 ntBASIC1.6□□□□□ -2.15
PDLIM2Q96JY6 MIR548AO-201ENST00000579992 96 ntBASIC1.6□□□□□ -2.15
PDLIM2Q96JY6 RNU4-67P-201ENST00000364569 141 ntBASIC1.59□□□□□ -2.15
PDLIM2Q96JY6 RNU6-409P-201ENST00000384114 104 ntBASIC1.59□□□□□ -2.15
PDLIM2Q96JY6 MIR758-201ENST00000390227 88 ntBASIC1.59□□□□□ -2.15
PDLIM2Q96JY6 RNU6-733P-201ENST00000410759 104 ntBASIC1.59□□□□□ -2.15
PDLIM2Q96JY6 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.59□□□□□ -2.15
PDLIM2Q96JY6 AC245047.7-201ENST00000440265 293 ntBASIC1.59□□□□□ -2.15
PDLIM2Q96JY6 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.59□□□□□ -2.15
PDLIM2Q96JY6 SNORA40.13-201ENST00000516379 120 ntBASIC1.59□□□□□ -2.15
PDLIM2Q96JY6 CYP3A52P-201ENST00000563326 91 ntBASIC1.59□□□□□ -2.15
PDLIM2Q96JY6 AC022254.1-201ENST00000567857 235 ntBASIC1.59□□□□□ -2.15
PDLIM2Q96JY6 SNORA77B-201ENST00000578179 125 ntBASIC1.59□□□□□ -2.15
PDLIM2Q96JY6 AC006254.2-201ENST00000603259 279 ntBASIC1.59□□□□□ -2.15
PDLIM2Q96JY6 FAM71BP1-201ENST00000604431 523 ntBASIC1.59□□□□□ -2.15
PDLIM2Q96JY6 MIR8074-201ENST00000615081 81 ntBASIC1.59□□□□□ -2.15
PDLIM2Q96JY6 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.59□□□□□ -2.15
PDLIM2Q96JY6 Z97988.1-201ENST00000637697 135 ntBASIC1.59□□□□□ -2.15
PDLIM2Q96JY6 RNU4-36P-201ENST00000364294 144 ntBASIC1.58□□□□□ -2.16
PDLIM2Q96JY6 MIR150-201ENST00000385048 84 ntBASIC1.58□□□□□ -2.16
PDLIM2Q96JY6 SNORD41-201ENST00000386967 70 ntBASIC1.58□□□□□ -2.16
PDLIM2Q96JY6 SNORA7.5-201ENST00000410672 110 ntBASIC1.58□□□□□ -2.16
PDLIM2Q96JY6 MIR1270-201ENST00000459320 83 ntBASIC1.58□□□□□ -2.16
PDLIM2Q96JY6 RNU6-904P-201ENST00000516206 101 ntBASIC1.58□□□□□ -2.16
PDLIM2Q96JY6 SNORD111.1-201ENST00000516421 86 ntBASIC1.58□□□□□ -2.16
PDLIM2Q96JY6 DEFB131E-201ENST00000532329 154 ntBASIC1.58□□□□□ -2.16
PDLIM2Q96JY6 MIR4285-201ENST00000581001 85 ntBASIC1.58□□□□□ -2.16
PDLIM2Q96JY6 MIR4713-201ENST00000582691 75 ntBASIC1.58□□□□□ -2.16
PDLIM2Q96JY6 MIR502-201ENST00000606349 86 ntBASIC1.58□□□□□ -2.16
PDLIM2Q96JY6 RNU6-640P-201ENST00000363693 105 ntBASIC1.57□□□□□ -2.16
PDLIM2Q96JY6 RNA5SP190-201ENST00000365222 118 ntBASIC1.57□□□□□ -2.16
PDLIM2Q96JY6 SNORA18-201ENST00000384416 132 ntBASIC1.57□□□□□ -2.16
PDLIM2Q96JY6 RNU6-342P-201ENST00000384521 104 ntBASIC1.57□□□□□ -2.16
PDLIM2Q96JY6 MIR605-201ENST00000385078 83 ntBASIC1.57□□□□□ -2.16
PDLIM2Q96JY6 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.57□□□□□ -2.16
PDLIM2Q96JY6 RNU6-602P-201ENST00000411155 105 ntBASIC1.57□□□□□ -2.16
PDLIM2Q96JY6 SNORD13-201ENST00000459299 104 ntBASIC1.57□□□□□ -2.16
PDLIM2Q96JY6 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.57□□□□□ -2.16
PDLIM2Q96JY6 AC015688.6-201ENST00000577737 104 ntBASIC1.57□□□□□ -2.16
PDLIM2Q96JY6 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
PDLIM2Q96JY6 Y_RNA.818-201ENST00000618813 71 ntBASIC1.57□□□□□ -2.16
PDLIM2Q96JY6 MIR8065-201ENST00000620577 100 ntBASIC1.57□□□□□ -2.16
PDLIM2Q96JY6 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
PDLIM2Q96JY6 RNU6-1099P-201ENST00000363533 107 ntBASIC1.56□□□□□ -2.16
PDLIM2Q96JY6 Y_RNA.360-201ENST00000365512 102 ntBASIC1.56□□□□□ -2.16
PDLIM2Q96JY6 SNORD38B-201ENST00000384690 67 ntBASIC1.56□□□□□ -2.16
PDLIM2Q96JY6 RNU6-482P-201ENST00000391068 107 ntBASIC1.56□□□□□ -2.16
PDLIM2Q96JY6 AC090844.1-201ENST00000422019 156 ntBASIC1.56□□□□□ -2.16
PDLIM2Q96JY6 AC009474.2-201ENST00000451383 136 ntBASIC1.56□□□□□ -2.16
PDLIM2Q96JY6 RNU6-521P-201ENST00000516663 105 ntBASIC1.56□□□□□ -2.16
PDLIM2Q96JY6 SNORD38B-202ENST00000625943 69 ntBASIC1.56□□□□□ -2.16
PDLIM2Q96JY6 RNY3P2-201ENST00000362918 102 ntBASIC1.55□□□□□ -2.16
PDLIM2Q96JY6 RNU1-17P-201ENST00000363022 152 ntBASIC1.55□□□□□ -2.16
PDLIM2Q96JY6 Y_RNA.369-201ENST00000365568 117 ntBASIC1.55□□□□□ -2.16
PDLIM2Q96JY6 RNU6-947P-201ENST00000516264 106 ntBASIC1.55□□□□□ -2.16
PDLIM2Q96JY6 MIR3192-201ENST00000584920 77 ntBASIC1.55□□□□□ -2.16
PDLIM2Q96JY6 AL357312.1-201ENST00000603879 298 ntBASIC1.55□□□□□ -2.16
PDLIM2Q96JY6 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
PDLIM2Q96JY6 MIR8063-201ENST00000621930 81 ntBASIC1.55□□□□□ -2.16
PDLIM2Q96JY6 MIR4679-1-201ENST00000637619 75 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 200.9 ms