Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 AC062016.1-201ENST00000355719 319 ntBASIC2.58□□□□□ -2
TRIM11Q96F44 RNU1-91P-201ENST00000364746 163 ntBASIC2.58□□□□□ -2
TRIM11Q96F44 RNY1P13-201ENST00000365030 105 ntBASIC2.58□□□□□ -2
TRIM11Q96F44 Y_RNA.508-201ENST00000384502 114 ntBASIC2.58□□□□□ -2
TRIM11Q96F44 MIR196B-201ENST00000384852 84 ntBASIC2.58□□□□□ -2
TRIM11Q96F44 MIR660-201ENST00000385235 97 ntBASIC2.58□□□□□ -2
TRIM11Q96F44 RNA5SP184-201ENST00000411071 108 ntBASIC2.58□□□□□ -2
TRIM11Q96F44 FGF7P7-201ENST00000514120 227 ntBASIC2.58□□□□□ -2
TRIM11Q96F44 SCARNA16.3-201ENST00000516595 184 ntBASIC2.58□□□□□ -2
TRIM11Q96F44 SNORA74.3-201ENST00000517108 154 ntBASIC2.58□□□□□ -2
TRIM11Q96F44 RNA5SP402-201ENST00000517148 110 ntBASIC2.58□□□□□ -2
TRIM11Q96F44 AC133485.1-201ENST00000567176 124 ntBASIC2.58□□□□□ -2
TRIM11Q96F44 MIR4319-201ENST00000577285 85 ntBASIC2.58□□□□□ -2
TRIM11Q96F44 AC067747.1-201ENST00000608026 250 ntBASIC2.58□□□□□ -2
TRIM11Q96F44 AC006386.2-201ENST00000624491 75 ntBASIC2.58□□□□□ -2
TRIM11Q96F44 AC012005.1-201ENST00000624575 75 ntBASIC2.58□□□□□ -2
TRIM11Q96F44 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
TRIM11Q96F44 AC016717.2-201ENST00000609089 5141 ntBASIC2.58□□□□□ -2
TRIM11Q96F44 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.57□□□□□ -2
TRIM11Q96F44 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
TRIM11Q96F44 SNORA25.9-201ENST00000365087 128 ntBASIC2.57□□□□□ -2
TRIM11Q96F44 AL359511.1-201ENST00000402970 211 ntBASIC2.57□□□□□ -2
TRIM11Q96F44 RNU7-85P-201ENST00000458851 63 ntBASIC2.57□□□□□ -2
TRIM11Q96F44 RNA5SP356-201ENST00000515972 94 ntBASIC2.57□□□□□ -2
TRIM11Q96F44 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.57□□□□□ -2
TRIM11Q96F44 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.57□□□□□ -2
TRIM11Q96F44 RNY1P2-201ENST00000364820 117 ntBASIC2.56□□□□□ -2
TRIM11Q96F44 MIR483-201ENST00000385070 76 ntBASIC2.56□□□□□ -2
TRIM11Q96F44 SNORA11.1-201ENST00000408133 129 ntBASIC2.56□□□□□ -2
TRIM11Q96F44 MIR1265-201ENST00000408444 86 ntBASIC2.56□□□□□ -2
TRIM11Q96F44 RPL23AP83-201ENST00000434984 473 ntBASIC2.56□□□□□ -2
TRIM11Q96F44 Y_RNA.648-201ENST00000459455 110 ntBASIC2.56□□□□□ -2
TRIM11Q96F44 RNU7-43P-201ENST00000516554 64 ntBASIC2.56□□□□□ -2
TRIM11Q96F44 EIF4BP1-201ENST00000554881 351 ntBASIC2.56□□□□□ -2
TRIM11Q96F44 MIR5694-201ENST00000581190 76 ntBASIC2.56□□□□□ -2
TRIM11Q96F44 AL033523.1-201ENST00000605153 153 ntBASIC2.56□□□□□ -2
TRIM11Q96F44 AC021506.2-201ENST00000612354 169 ntBASIC2.56□□□□□ -2
TRIM11Q96F44 AC022202.1-201ENST00000613515 211 ntBASIC2.56□□□□□ -2
TRIM11Q96F44 MIR1291-201ENST00000627649 87 ntBASIC2.56□□□□□ -2
TRIM11Q96F44 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.55□□□□□ -2
TRIM11Q96F44 RNU6-161P-201ENST00000363051 106 ntBASIC2.55□□□□□ -2
TRIM11Q96F44 SNORA80A-201ENST00000363922 136 ntBASIC2.55□□□□□ -2
TRIM11Q96F44 BX510359.4-201ENST00000423750 193 ntBASIC2.55□□□□□ -2
TRIM11Q96F44 RNU7-193P-201ENST00000516723 65 ntBASIC2.55□□□□□ -2
TRIM11Q96F44 RNU6-448P-201ENST00000517052 107 ntBASIC2.55□□□□□ -2
TRIM11Q96F44 AC008133.2-201ENST00000624540 351 ntBASIC2.55□□□□□ -2
TRIM11Q96F44 SCARNA15.3-201ENST00000626315 122 ntBASIC2.55□□□□□ -2
TRIM11Q96F44 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
TRIM11Q96F44 RNU6-1237P-201ENST00000384777 107 ntBASIC2.54□□□□□ -2
TRIM11Q96F44 AL023284.1-201ENST00000403956 276 ntBASIC2.54□□□□□ -2
TRIM11Q96F44 AL513328.1-201ENST00000446460 224 ntBASIC2.54□□□□□ -2
TRIM11Q96F44 SNRPGP12-201ENST00000449481 213 ntBASIC2.54□□□□□ -2
TRIM11Q96F44 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.54□□□□□ -2
TRIM11Q96F44 RNA5SP24-201ENST00000516478 95 ntBASIC2.54□□□□□ -2
TRIM11Q96F44 RNU6-807P-201ENST00000516805 107 ntBASIC2.54□□□□□ -2
TRIM11Q96F44 MIR3126-201ENST00000577443 74 ntBASIC2.54□□□□□ -2
TRIM11Q96F44 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.54□□□□□ -2
TRIM11Q96F44 RNA5SP237-201ENST00000410414 113 ntBASIC2.53□□□□□ -2
TRIM11Q96F44 RNU4-83P-201ENST00000410863 133 ntBASIC2.53□□□□□ -2
TRIM11Q96F44 RNU6-634P-201ENST00000459134 106 ntBASIC2.53□□□□□ -2
TRIM11Q96F44 RNU6-1108P-201ENST00000516308 104 ntBASIC2.53□□□□□ -2
TRIM11Q96F44 Y_RNA.681-201ENST00000516445 113 ntBASIC2.53□□□□□ -2
TRIM11Q96F44 AC141846.1-201ENST00000568348 142 ntBASIC2.53□□□□□ -2
TRIM11Q96F44 AC090897.1-201ENST00000580909 226 ntBASIC2.53□□□□□ -2
TRIM11Q96F44 MIR6817-201ENST00000615588 66 ntBASIC2.53□□□□□ -2
TRIM11Q96F44 MIR1297-201ENST00000637311 77 ntBASIC2.53□□□□□ -2
TRIM11Q96F44 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.53□□□□□ -2
TRIM11Q96F44 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.53□□□□□ -2.01
TRIM11Q96F44 MIR21-201ENST00000362134 72 ntBASIC2.52□□□□□ -2.01
TRIM11Q96F44 SNORD38B-201ENST00000384690 67 ntBASIC2.52□□□□□ -2.01
TRIM11Q96F44 MIR520A-201ENST00000384862 85 ntBASIC2.52□□□□□ -2.01
TRIM11Q96F44 RNU6-70P-201ENST00000516438 60 ntBASIC2.52□□□□□ -2.01
TRIM11Q96F44 MIR4709-201ENST00000577272 72 ntBASIC2.52□□□□□ -2.01
TRIM11Q96F44 MIR4764-201ENST00000580680 88 ntBASIC2.52□□□□□ -2.01
TRIM11Q96F44 AL137847.3-201ENST00000611521 109 ntBASIC2.52□□□□□ -2.01
TRIM11Q96F44 SNORD38B-202ENST00000625943 69 ntBASIC2.52□□□□□ -2.01
TRIM11Q96F44 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
TRIM11Q96F44 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
TRIM11Q96F44 RNA5SP68-201ENST00000363885 119 ntBASIC2.51□□□□□ -2.01
TRIM11Q96F44 RNU6-811P-201ENST00000384069 107 ntBASIC2.51□□□□□ -2.01
TRIM11Q96F44 Y_RNA.532-201ENST00000384590 113 ntBASIC2.51□□□□□ -2.01
TRIM11Q96F44 SNORD23.1-201ENST00000408212 104 ntBASIC2.51□□□□□ -2.01
TRIM11Q96F44 RNU2-7P-201ENST00000410794 178 ntBASIC2.51□□□□□ -2.01
TRIM11Q96F44 RNA5SP270-201ENST00000411361 118 ntBASIC2.51□□□□□ -2.01
TRIM11Q96F44 RNU6-687P-201ENST00000516443 89 ntBASIC2.51□□□□□ -2.01
TRIM11Q96F44 MIR597-201ENST00000384968 97 ntBASIC2.5□□□□□ -2.01
TRIM11Q96F44 RNU11-3P-201ENST00000391111 133 ntBASIC2.5□□□□□ -2.01
TRIM11Q96F44 RNU2-59P-201ENST00000410482 191 ntBASIC2.5□□□□□ -2.01
TRIM11Q96F44 AC027119.1-201ENST00000440877 241 ntBASIC2.5□□□□□ -2.01
TRIM11Q96F44 AC099513.1-201ENST00000490423 301 ntBASIC2.5□□□□□ -2.01
TRIM11Q96F44 AC026436.1-201ENST00000510537 270 ntBASIC2.5□□□□□ -2.01
TRIM11Q96F44 RNA5SP148-201ENST00000516527 94 ntBASIC2.5□□□□□ -2.01
TRIM11Q96F44 RNU6-850P-201ENST00000516934 103 ntBASIC2.5□□□□□ -2.01
TRIM11Q96F44 SNORA31.25-201ENST00000517242 134 ntBASIC2.5□□□□□ -2.01
TRIM11Q96F44 RNA5SP437-201ENST00000517249 129 ntBASIC2.5□□□□□ -2.01
TRIM11Q96F44 AC006023.1-201ENST00000603944 259 ntBASIC2.5□□□□□ -2.01
TRIM11Q96F44 AL662814.1-201ENST00000617364 121 ntBASIC2.5□□□□□ -2.01
TRIM11Q96F44 AC008163.1-202ENST00000636004 2889 ntBASIC2.5□□□□□ -2.01
TRIM11Q96F44 WWP1P1-201ENST00000466609 2769 ntBASIC2.49□□□□□ -2.01
TRIM11Q96F44 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms