Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
TRIM43Q96BQ3 RNU6-1319P-201ENST00000390855 104 ntBASIC1.33□□□□□ -2.2
TRIM43Q96BQ3 RNU6-747P-201ENST00000390928 104 ntBASIC1.33□□□□□ -2.2
TRIM43Q96BQ3 RNU6-241P-201ENST00000391148 104 ntBASIC1.33□□□□□ -2.2
TRIM43Q96BQ3 RNU6-177P-201ENST00000411257 104 ntBASIC1.33□□□□□ -2.2
TRIM43Q96BQ3 RNU6-893P-201ENST00000458841 100 ntBASIC1.33□□□□□ -2.2
TRIM43Q96BQ3 RNU7-90P-201ENST00000459216 62 ntBASIC1.33□□□□□ -2.2
TRIM43Q96BQ3 Y_RNA.692-201ENST00000516627 105 ntBASIC1.33□□□□□ -2.2
TRIM43Q96BQ3 RNU6-113P-201ENST00000516653 101 ntBASIC1.33□□□□□ -2.2
TRIM43Q96BQ3 AP001340.1-201ENST00000624405 217 ntBASIC1.33□□□□□ -2.2
TRIM43Q96BQ3 RNU6-746P-201ENST00000384112 109 ntBASIC1.32□□□□□ -2.2
TRIM43Q96BQ3 RNU6-125P-201ENST00000384505 107 ntBASIC1.32□□□□□ -2.2
TRIM43Q96BQ3 MT-TN-201ENST00000387400 73 ntBASIC1.32□□□□□ -2.2
TRIM43Q96BQ3 RNU6-613P-201ENST00000410412 108 ntBASIC1.32□□□□□ -2.2
TRIM43Q96BQ3 POLR2J4-204ENST00000418424 324 ntBASIC1.32□□□□□ -2.2
TRIM43Q96BQ3 RNU7-21P-201ENST00000459430 62 ntBASIC1.32□□□□□ -2.2
TRIM43Q96BQ3 Y_RNA.757-201ENST00000578934 114 ntBASIC1.32□□□□□ -2.2
TRIM43Q96BQ3 MIR3133-201ENST00000583157 78 ntBASIC1.32□□□□□ -2.2
TRIM43Q96BQ3 MIR4264-201ENST00000583520 66 ntBASIC1.32□□□□□ -2.2
TRIM43Q96BQ3 SNORA26.6-201ENST00000391256 115 ntBASIC1.31□□□□□ -2.2
TRIM43Q96BQ3 MIR548M-201ENST00000408260 86 ntBASIC1.31□□□□□ -2.2
TRIM43Q96BQ3 AC063976.4-201ENST00000421971 163 ntBASIC1.31□□□□□ -2.2
TRIM43Q96BQ3 AC090844.1-201ENST00000422019 156 ntBASIC1.31□□□□□ -2.2
TRIM43Q96BQ3 MIR4295-201ENST00000585286 85 ntBASIC1.31□□□□□ -2.2
TRIM43Q96BQ3 HSPE1P19-201ENST00000603327 295 ntBASIC1.31□□□□□ -2.2
TRIM43Q96BQ3 MIR7974-201ENST00000615835 79 ntBASIC1.31□□□□□ -2.2
TRIM43Q96BQ3 AC008163.1-202ENST00000636004 2889 ntBASIC1.31□□□□□ -2.2
TRIM43Q96BQ3 AC010332.2-201ENST00000613083 1904 ntBASIC1.3□□□□□ -2.2
TRIM43Q96BQ3 RNU6-349P-201ENST00000362402 107 ntBASIC1.3□□□□□ -2.2
TRIM43Q96BQ3 SNORA22.1-201ENST00000362701 134 ntBASIC1.3□□□□□ -2.2
TRIM43Q96BQ3 RNU6-774P-201ENST00000363238 107 ntBASIC1.3□□□□□ -2.2
TRIM43Q96BQ3 RNU6-654P-201ENST00000364373 107 ntBASIC1.3□□□□□ -2.2
TRIM43Q96BQ3 RNU6-309P-201ENST00000364573 106 ntBASIC1.3□□□□□ -2.2
TRIM43Q96BQ3 Y_RNA.430-201ENST00000384081 110 ntBASIC1.3□□□□□ -2.2
TRIM43Q96BQ3 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.3□□□□□ -2.2
TRIM43Q96BQ3 RNU6-602P-201ENST00000411155 105 ntBASIC1.3□□□□□ -2.2
TRIM43Q96BQ3 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.3□□□□□ -2.2
TRIM43Q96BQ3 RNU7-40P-201ENST00000516397 64 ntBASIC1.3□□□□□ -2.2
TRIM43Q96BQ3 AC133485.4-201ENST00000561835 220 ntBASIC1.3□□□□□ -2.2
TRIM43Q96BQ3 AC138907.4-201ENST00000570107 226 ntBASIC1.3□□□□□ -2.2
TRIM43Q96BQ3 U7.2-201ENST00000607576 63 ntBASIC1.3□□□□□ -2.2
TRIM43Q96BQ3 Y_RNA.568-201ENST00000384742 113 ntBASIC1.29□□□□□ -2.2
TRIM43Q96BQ3 MIR618-201ENST00000385287 98 ntBASIC1.29□□□□□ -2.2
TRIM43Q96BQ3 MIR758-201ENST00000390227 88 ntBASIC1.29□□□□□ -2.2
TRIM43Q96BQ3 Y_RNA.651-201ENST00000459380 103 ntBASIC1.29□□□□□ -2.2
TRIM43Q96BQ3 AC087343.1-201ENST00000477341 475 ntBASIC1.29□□□□□ -2.2
TRIM43Q96BQ3 RPS23P4-201ENST00000487908 423 ntBASIC1.29□□□□□ -2.2
TRIM43Q96BQ3 RNA5SP272-201ENST00000516095 111 ntBASIC1.29□□□□□ -2.2
TRIM43Q96BQ3 RNU6-240P-201ENST00000516098 97 ntBASIC1.29□□□□□ -2.2
TRIM43Q96BQ3 AC068338.1-201ENST00000565567 176 ntBASIC1.29□□□□□ -2.2
TRIM43Q96BQ3 MIR5000-201ENST00000577717 103 ntBASIC1.29□□□□□ -2.2
TRIM43Q96BQ3 AC027335.2-201ENST00000624030 375 ntBASIC1.29□□□□□ -2.2
TRIM43Q96BQ3 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.29□□□□□ -2.2
TRIM43Q96BQ3 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
TRIM43Q96BQ3 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.29□□□□□ -2.2
TRIM43Q96BQ3 MIR377-201ENST00000362145 69 ntBASIC1.28□□□□□ -2.2
TRIM43Q96BQ3 MIR373-201ENST00000362273 69 ntBASIC1.28□□□□□ -2.2
TRIM43Q96BQ3 SNORA2B-201ENST00000384583 137 ntBASIC1.28□□□□□ -2.2
TRIM43Q96BQ3 SNORA40-201ENST00000388090 126 ntBASIC1.28□□□□□ -2.2
TRIM43Q96BQ3 RNU6-205P-201ENST00000390858 107 ntBASIC1.28□□□□□ -2.2
TRIM43Q96BQ3 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.28□□□□□ -2.2
TRIM43Q96BQ3 TUG1_4.1-201ENST00000619464 181 ntBASIC1.28□□□□□ -2.2
TRIM43Q96BQ3 RNU6-508P-201ENST00000363231 103 ntBASIC1.27□□□□□ -2.21
TRIM43Q96BQ3 SNORD113.3-201ENST00000364630 78 ntBASIC1.27□□□□□ -2.21
TRIM43Q96BQ3 RNA5SP95-201ENST00000410319 137 ntBASIC1.27□□□□□ -2.21
TRIM43Q96BQ3 AL022718.1-201ENST00000412004 84 ntBASIC1.27□□□□□ -2.21
TRIM43Q96BQ3 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.27□□□□□ -2.21
TRIM43Q96BQ3 AC023827.1-201ENST00000569247 97 ntBASIC1.27□□□□□ -2.21
TRIM43Q96BQ3 AC021443.1-201ENST00000604478 211 ntBASIC1.27□□□□□ -2.21
TRIM43Q96BQ3 MIR6841-201ENST00000637129 72 ntBASIC1.27□□□□□ -2.21
TRIM43Q96BQ3 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.27□□□□□ -2.21
TRIM43Q96BQ3 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
TRIM43Q96BQ3 Y_RNA.168-201ENST00000363740 102 ntBASIC1.26□□□□□ -2.21
TRIM43Q96BQ3 RNA5SP144-201ENST00000410846 116 ntBASIC1.26□□□□□ -2.21
TRIM43Q96BQ3 AC002429.1-201ENST00000437672 148 ntBASIC1.26□□□□□ -2.21
TRIM43Q96BQ3 MIR3121-201ENST00000579680 77 ntBASIC1.26□□□□□ -2.21
TRIM43Q96BQ3 MIR4305-201ENST00000583252 102 ntBASIC1.26□□□□□ -2.21
TRIM43Q96BQ3 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
TRIM43Q96BQ3 SNORD111-201ENST00000408139 94 ntBASIC1.25□□□□□ -2.21
TRIM43Q96BQ3 AC244023.1-201ENST00000426884 112 ntBASIC1.25□□□□□ -2.21
TRIM43Q96BQ3 RNU7-62P-201ENST00000458856 62 ntBASIC1.25□□□□□ -2.21
TRIM43Q96BQ3 AC242498.1-201ENST00000604134 111 ntBASIC1.25□□□□□ -2.21
TRIM43Q96BQ3 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
TRIM43Q96BQ3 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
TRIM43Q96BQ3 RNU6-647P-201ENST00000364243 107 ntBASIC1.24□□□□□ -2.21
TRIM43Q96BQ3 SNORD12C-201ENST00000386307 89 ntBASIC1.24□□□□□ -2.21
TRIM43Q96BQ3 RNU6-994P-201ENST00000410507 111 ntBASIC1.24□□□□□ -2.21
TRIM43Q96BQ3 MTND4LP9-201ENST00000427694 174 ntBASIC1.24□□□□□ -2.21
TRIM43Q96BQ3 AC036111.3-201ENST00000526389 112 ntBASIC1.24□□□□□ -2.21
TRIM43Q96BQ3 RN7SL793P-201ENST00000583259 296 ntBASIC1.24□□□□□ -2.21
TRIM43Q96BQ3 AC106800.4-201ENST00000614905 153 ntBASIC1.24□□□□□ -2.21
TRIM43Q96BQ3 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
TRIM43Q96BQ3 Y_RNA.114-201ENST00000363265 113 ntBASIC1.23□□□□□ -2.21
TRIM43Q96BQ3 SNORD50.2-201ENST00000365465 70 ntBASIC1.23□□□□□ -2.21
TRIM43Q96BQ3 Y_RNA.366-201ENST00000365540 102 ntBASIC1.23□□□□□ -2.21
TRIM43Q96BQ3 MIR588-201ENST00000384900 83 ntBASIC1.23□□□□□ -2.21
TRIM43Q96BQ3 RNU6-257P-201ENST00000410238 98 ntBASIC1.23□□□□□ -2.21
TRIM43Q96BQ3 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.23□□□□□ -2.21
TRIM43Q96BQ3 RNU7-164P-201ENST00000459221 62 ntBASIC1.23□□□□□ -2.21
TRIM43Q96BQ3 RNU7-113P-201ENST00000459273 62 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 263.3 ms