Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 Y_RNA.549-201ENST00000384657 102 ntBASIC1.48□□□□□ -2.17
ATP2A3Q93084 SNORD41-201ENST00000386967 70 ntBASIC1.48□□□□□ -2.17
ATP2A3Q93084 MIR1276-201ENST00000408707 83 ntBASIC1.48□□□□□ -2.17
ATP2A3Q93084 AC063976.4-201ENST00000421971 163 ntBASIC1.48□□□□□ -2.17
ATP2A3Q93084 RPS29P24-201ENST00000486345 171 ntBASIC1.48□□□□□ -2.17
ATP2A3Q93084 RNU7-43P-201ENST00000516554 64 ntBASIC1.48□□□□□ -2.17
ATP2A3Q93084 RNU6-113P-201ENST00000516653 101 ntBASIC1.48□□□□□ -2.17
ATP2A3Q93084 AL035470.1-201ENST00000622571 220 ntBASIC1.48□□□□□ -2.17
ATP2A3Q93084 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.47□□□□□ -2.17
ATP2A3Q93084 Y_RNA.370-201ENST00000365589 108 ntBASIC1.47□□□□□ -2.17
ATP2A3Q93084 MIR520C-201ENST00000385005 87 ntBASIC1.47□□□□□ -2.17
ATP2A3Q93084 MIR548A3-201ENST00000385297 97 ntBASIC1.47□□□□□ -2.17
ATP2A3Q93084 RNU6-913P-201ENST00000390913 95 ntBASIC1.47□□□□□ -2.17
ATP2A3Q93084 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.47□□□□□ -2.17
ATP2A3Q93084 Y_RNA.649-201ENST00000459077 103 ntBASIC1.47□□□□□ -2.17
ATP2A3Q93084 RNU2-11P-201ENST00000459191 187 ntBASIC1.47□□□□□ -2.17
ATP2A3Q93084 RN7SKP88-201ENST00000516847 250 ntBASIC1.47□□□□□ -2.17
ATP2A3Q93084 AC019288.1-201ENST00000557918 224 ntBASIC1.47□□□□□ -2.17
ATP2A3Q93084 MIR4452-201ENST00000583004 71 ntBASIC1.47□□□□□ -2.17
ATP2A3Q93084 AC021443.1-201ENST00000604478 211 ntBASIC1.47□□□□□ -2.17
ATP2A3Q93084 7SK.8-201ENST00000612110 250 ntBASIC1.47□□□□□ -2.17
ATP2A3Q93084 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
ATP2A3Q93084 7SK.11-201ENST00000615477 250 ntBASIC1.47□□□□□ -2.17
ATP2A3Q93084 AL353770.2-201ENST00000620024 78 ntBASIC1.47□□□□□ -2.17
ATP2A3Q93084 7SK.13-201ENST00000622040 250 ntBASIC1.47□□□□□ -2.17
ATP2A3Q93084 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.46□□□□□ -2.18
ATP2A3Q93084 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
ATP2A3Q93084 Y_RNA.298-201ENST00000364960 107 ntBASIC1.46□□□□□ -2.18
ATP2A3Q93084 SNORD116-21-201ENST00000384507 92 ntBASIC1.46□□□□□ -2.18
ATP2A3Q93084 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
ATP2A3Q93084 RPL39P39-201ENST00000455840 151 ntBASIC1.46□□□□□ -2.18
ATP2A3Q93084 RPS29P29-201ENST00000456396 171 ntBASIC1.46□□□□□ -2.18
ATP2A3Q93084 SNORD111.1-201ENST00000516421 86 ntBASIC1.46□□□□□ -2.18
ATP2A3Q93084 RNU6-1258P-201ENST00000516911 111 ntBASIC1.46□□□□□ -2.18
ATP2A3Q93084 MIR4764-201ENST00000580680 88 ntBASIC1.46□□□□□ -2.18
ATP2A3Q93084 MIR8065-201ENST00000620577 100 ntBASIC1.46□□□□□ -2.18
ATP2A3Q93084 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
ATP2A3Q93084 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.46□□□□□ -2.18
ATP2A3Q93084 SNORA24-201ENST00000384096 131 ntBASIC1.45□□□□□ -2.18
ATP2A3Q93084 SNORA26.6-201ENST00000391256 115 ntBASIC1.45□□□□□ -2.18
ATP2A3Q93084 HMGN1P33-201ENST00000432945 451 ntBASIC1.45□□□□□ -2.18
ATP2A3Q93084 RNU7-164P-201ENST00000459221 62 ntBASIC1.45□□□□□ -2.18
ATP2A3Q93084 RNU7-96P-201ENST00000459535 64 ntBASIC1.45□□□□□ -2.18
ATP2A3Q93084 RNU6-947P-201ENST00000516264 106 ntBASIC1.45□□□□□ -2.18
ATP2A3Q93084 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.45□□□□□ -2.18
ATP2A3Q93084 MIR3664-201ENST00000579074 99 ntBASIC1.45□□□□□ -2.18
ATP2A3Q93084 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.45□□□□□ -2.18
ATP2A3Q93084 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.45□□□□□ -2.18
ATP2A3Q93084 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.44□□□□□ -2.18
ATP2A3Q93084 RNA5SP327-201ENST00000362494 101 ntBASIC1.44□□□□□ -2.18
ATP2A3Q93084 Y_RNA.346-201ENST00000365385 112 ntBASIC1.44□□□□□ -2.18
ATP2A3Q93084 SNORA22-201ENST00000383907 134 ntBASIC1.44□□□□□ -2.18
ATP2A3Q93084 RNA5SP144-201ENST00000410846 116 ntBASIC1.44□□□□□ -2.18
ATP2A3Q93084 POLR2J4-204ENST00000418424 324 ntBASIC1.44□□□□□ -2.18
ATP2A3Q93084 COX6CP6-201ENST00000490840 228 ntBASIC1.44□□□□□ -2.18
ATP2A3Q93084 PDCD5P2-201ENST00000507570 312 ntBASIC1.44□□□□□ -2.18
ATP2A3Q93084 RNU7-70P-201ENST00000516941 66 ntBASIC1.44□□□□□ -2.18
ATP2A3Q93084 RNU6-958P-201ENST00000516995 106 ntBASIC1.44□□□□□ -2.18
ATP2A3Q93084 MIR4305-201ENST00000583252 102 ntBASIC1.44□□□□□ -2.18
ATP2A3Q93084 MIR7974-201ENST00000615835 79 ntBASIC1.44□□□□□ -2.18
ATP2A3Q93084 AC021613.1-201ENST00000623880 111 ntBASIC1.44□□□□□ -2.18
ATP2A3Q93084 Y_RNA.171-201ENST00000363760 102 ntBASIC1.43□□□□□ -2.18
ATP2A3Q93084 RNU6-755P-201ENST00000364400 103 ntBASIC1.43□□□□□ -2.18
ATP2A3Q93084 SNORA70.7-201ENST00000384159 133 ntBASIC1.43□□□□□ -2.18
ATP2A3Q93084 AL512326.2-201ENST00000426359 151 ntBASIC1.43□□□□□ -2.18
ATP2A3Q93084 AL035398.1-201ENST00000430869 322 ntBASIC1.43□□□□□ -2.18
ATP2A3Q93084 MIR1270-201ENST00000459320 83 ntBASIC1.43□□□□□ -2.18
ATP2A3Q93084 RNU7-80P-201ENST00000459562 61 ntBASIC1.43□□□□□ -2.18
ATP2A3Q93084 RNU7-41P-201ENST00000515917 61 ntBASIC1.43□□□□□ -2.18
ATP2A3Q93084 RNA5SP480-201ENST00000516840 109 ntBASIC1.43□□□□□ -2.18
ATP2A3Q93084 MIR4791-201ENST00000607666 84 ntBASIC1.43□□□□□ -2.18
ATP2A3Q93084 uc_338.28-201ENST00000612082 187 ntBASIC1.43□□□□□ -2.18
ATP2A3Q93084 SNORA25.8-201ENST00000364831 128 ntBASIC1.42□□□□□ -2.18
ATP2A3Q93084 RNU6-880P-201ENST00000384526 107 ntBASIC1.42□□□□□ -2.18
ATP2A3Q93084 Y_RNA.537-201ENST00000384626 109 ntBASIC1.42□□□□□ -2.18
ATP2A3Q93084 RNA5SP136-201ENST00000410906 107 ntBASIC1.42□□□□□ -2.18
ATP2A3Q93084 AC090844.1-201ENST00000422019 156 ntBASIC1.42□□□□□ -2.18
ATP2A3Q93084 AC007012.1-201ENST00000567192 175 ntBASIC1.42□□□□□ -2.18
ATP2A3Q93084 MIR6078-201ENST00000611069 100 ntBASIC1.42□□□□□ -2.18
ATP2A3Q93084 AC243994.1-201ENST00000618627 109 ntBASIC1.42□□□□□ -2.18
ATP2A3Q93084 AC008133.2-201ENST00000624540 351 ntBASIC1.42□□□□□ -2.18
ATP2A3Q93084 MIR6841-201ENST00000637129 72 ntBASIC1.42□□□□□ -2.18
ATP2A3Q93084 Y_RNA.198-201ENST00000364013 98 ntBASIC1.41□□□□□ -2.18
ATP2A3Q93084 Y_RNA.344-201ENST00000365381 112 ntBASIC1.41□□□□□ -2.18
ATP2A3Q93084 Y_RNA.454-201ENST00000384224 113 ntBASIC1.41□□□□□ -2.18
ATP2A3Q93084 SNORA51.10-201ENST00000384418 136 ntBASIC1.41□□□□□ -2.18
ATP2A3Q93084 snoU13.25-201ENST00000458945 104 ntBASIC1.41□□□□□ -2.18
ATP2A3Q93084 RNU7-67P-201ENST00000459003 62 ntBASIC1.41□□□□□ -2.18
ATP2A3Q93084 AL020996.3-201ENST00000606617 222 ntBASIC1.41□□□□□ -2.18
ATP2A3Q93084 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.41□□□□□ -2.18
ATP2A3Q93084 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.41□□□□□ -2.18
ATP2A3Q93084 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
ATP2A3Q93084 RNA5SP48-201ENST00000363969 126 ntBASIC1.4□□□□□ -2.19
ATP2A3Q93084 Y_RNA.470-201ENST00000384307 117 ntBASIC1.4□□□□□ -2.19
ATP2A3Q93084 MIR3192-201ENST00000584920 77 ntBASIC1.4□□□□□ -2.19
ATP2A3Q93084 Y_RNA.281-201ENST00000364774 94 ntBASIC1.39□□□□□ -2.19
ATP2A3Q93084 Y_RNA.362-201ENST00000365518 110 ntBASIC1.39□□□□□ -2.19
ATP2A3Q93084 RNU6-147P-201ENST00000383983 107 ntBASIC1.39□□□□□ -2.19
ATP2A3Q93084 SNORD12C-201ENST00000386307 89 ntBASIC1.39□□□□□ -2.19
ATP2A3Q93084 MIR758-201ENST00000390227 88 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 197.1 ms