Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 Y_RNA.362-201ENST00000365518 110 ntBASIC1.74□□□□□ -2.13
ERCC4Q92889 MIR548D2-201ENST00000384955 97 ntBASIC1.74□□□□□ -2.13
ERCC4Q92889 MIR759-201ENST00000390224 91 ntBASIC1.74□□□□□ -2.13
ERCC4Q92889 AC245517.4-201ENST00000448601 281 ntBASIC1.74□□□□□ -2.13
ERCC4Q92889 RPL30P7-201ENST00000479312 323 ntBASIC1.74□□□□□ -2.13
ERCC4Q92889 RNU6-165P-201ENST00000517170 99 ntBASIC1.74□□□□□ -2.13
ERCC4Q92889 MIR3664-201ENST00000579074 99 ntBASIC1.74□□□□□ -2.13
ERCC4Q92889 AC087741.2-201ENST00000619415 172 ntBASIC1.74□□□□□ -2.13
ERCC4Q92889 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.74□□□□□ -2.13
ERCC4Q92889 Y_RNA.85-201ENST00000363014 111 ntBASIC1.73□□□□□ -2.13
ERCC4Q92889 Y_RNA.338-201ENST00000365320 114 ntBASIC1.73□□□□□ -2.13
ERCC4Q92889 AL603825.1-201ENST00000438481 80 ntBASIC1.73□□□□□ -2.13
ERCC4Q92889 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.73□□□□□ -2.13
ERCC4Q92889 MIR1270-201ENST00000459320 83 ntBASIC1.73□□□□□ -2.13
ERCC4Q92889 AL133373.1-201ENST00000497098 94 ntBASIC1.73□□□□□ -2.13
ERCC4Q92889 AC108729.3-201ENST00000513484 108 ntBASIC1.73□□□□□ -2.13
ERCC4Q92889 AC019176.1-201ENST00000518519 225 ntBASIC1.73□□□□□ -2.13
ERCC4Q92889 PRELID3BP2-201ENST00000605362 201 ntBASIC1.73□□□□□ -2.13
ERCC4Q92889 SNORD115-19-201ENST00000363098 82 ntBASIC1.72□□□□□ -2.13
ERCC4Q92889 SNORD115-18-201ENST00000363293 82 ntBASIC1.72□□□□□ -2.13
ERCC4Q92889 Y_RNA.140-201ENST00000363474 103 ntBASIC1.72□□□□□ -2.13
ERCC4Q92889 SNORD115-17-201ENST00000364612 82 ntBASIC1.72□□□□□ -2.13
ERCC4Q92889 Y_RNA.344-201ENST00000365381 112 ntBASIC1.72□□□□□ -2.13
ERCC4Q92889 Y_RNA.354-201ENST00000365448 111 ntBASIC1.72□□□□□ -2.13
ERCC4Q92889 SNORD12C-201ENST00000386307 89 ntBASIC1.72□□□□□ -2.13
ERCC4Q92889 MIR1304-201ENST00000408243 91 ntBASIC1.72□□□□□ -2.13
ERCC4Q92889 RNU6-955P-201ENST00000410497 104 ntBASIC1.72□□□□□ -2.13
ERCC4Q92889 RNU4-69P-201ENST00000410677 143 ntBASIC1.72□□□□□ -2.13
ERCC4Q92889 RPS27P16-201ENST00000425758 201 ntBASIC1.72□□□□□ -2.13
ERCC4Q92889 SNORD13-201ENST00000459299 104 ntBASIC1.72□□□□□ -2.13
ERCC4Q92889 AC023790.1-201ENST00000482174 347 ntBASIC1.72□□□□□ -2.13
ERCC4Q92889 RNA5SP445-201ENST00000515889 115 ntBASIC1.72□□□□□ -2.13
ERCC4Q92889 RNU6-412P-201ENST00000516434 106 ntBASIC1.72□□□□□ -2.13
ERCC4Q92889 AL512310.8-201ENST00000550183 120 ntBASIC1.72□□□□□ -2.13
ERCC4Q92889 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.72□□□□□ -2.13
ERCC4Q92889 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
ERCC4Q92889 AL161722.3-201ENST00000605789 2983 ntBASIC1.71□□□□□ -2.14
ERCC4Q92889 RNU6-1065P-201ENST00000384513 106 ntBASIC1.71□□□□□ -2.14
ERCC4Q92889 PDCD5P2-201ENST00000507570 312 ntBASIC1.71□□□□□ -2.14
ERCC4Q92889 CYP3A52P-201ENST00000563326 91 ntBASIC1.71□□□□□ -2.14
ERCC4Q92889 MIR548AE2-201ENST00000583456 67 ntBASIC1.71□□□□□ -2.14
ERCC4Q92889 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.71□□□□□ -2.14
ERCC4Q92889 RPL39P39-201ENST00000455840 151 ntBASIC1.7□□□□□ -2.14
ERCC4Q92889 RPL39P34-201ENST00000477141 156 ntBASIC1.7□□□□□ -2.14
ERCC4Q92889 RNA5SP61-201ENST00000516453 100 ntBASIC1.7□□□□□ -2.14
ERCC4Q92889 RNA5SP33-201ENST00000516687 98 ntBASIC1.7□□□□□ -2.14
ERCC4Q92889 MIR3937-201ENST00000580135 106 ntBASIC1.7□□□□□ -2.14
ERCC4Q92889 RNU6-94P-201ENST00000607728 107 ntBASIC1.7□□□□□ -2.14
ERCC4Q92889 AL391516.1-201ENST00000554380 2449 ntBASIC1.69□□□□□ -2.14
ERCC4Q92889 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
ERCC4Q92889 SNORA63.4-201ENST00000362763 126 ntBASIC1.69□□□□□ -2.14
ERCC4Q92889 RNU6-153P-201ENST00000364422 104 ntBASIC1.69□□□□□ -2.14
ERCC4Q92889 Y_RNA.323-201ENST00000365157 109 ntBASIC1.69□□□□□ -2.14
ERCC4Q92889 SNORA22-201ENST00000383907 134 ntBASIC1.69□□□□□ -2.14
ERCC4Q92889 SNORD38B-201ENST00000384690 67 ntBASIC1.69□□□□□ -2.14
ERCC4Q92889 SNORA67.5-201ENST00000391036 107 ntBASIC1.69□□□□□ -2.14
ERCC4Q92889 MIR1185-1-201ENST00000408598 86 ntBASIC1.69□□□□□ -2.14
ERCC4Q92889 RNU6-1054P-201ENST00000411293 104 ntBASIC1.69□□□□□ -2.14
ERCC4Q92889 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.69□□□□□ -2.14
ERCC4Q92889 AC244023.1-201ENST00000426884 112 ntBASIC1.69□□□□□ -2.14
ERCC4Q92889 RNU7-6P-201ENST00000516845 62 ntBASIC1.69□□□□□ -2.14
ERCC4Q92889 AC242498.1-201ENST00000604134 111 ntBASIC1.69□□□□□ -2.14
ERCC4Q92889 BX248123.2-201ENST00000606318 124 ntBASIC1.69□□□□□ -2.14
ERCC4Q92889 SNORD38B-202ENST00000625943 69 ntBASIC1.69□□□□□ -2.14
ERCC4Q92889 RNU6-1107P-201ENST00000364817 104 ntBASIC1.68□□□□□ -2.14
ERCC4Q92889 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.68□□□□□ -2.14
ERCC4Q92889 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
ERCC4Q92889 AC245047.7-201ENST00000440265 293 ntBASIC1.68□□□□□ -2.14
ERCC4Q92889 RNU11-2P-201ENST00000516898 142 ntBASIC1.68□□□□□ -2.14
ERCC4Q92889 RNU7-35P-201ENST00000517174 62 ntBASIC1.68□□□□□ -2.14
ERCC4Q92889 RNU6-902P-201ENST00000517212 91 ntBASIC1.68□□□□□ -2.14
ERCC4Q92889 AL589743.1-201ENST00000551932 2712 ntBASIC1.68□□□□□ -2.14
ERCC4Q92889 MIR337-201ENST00000362281 93 ntBASIC1.67□□□□□ -2.14
ERCC4Q92889 RNA5SP264-201ENST00000363115 107 ntBASIC1.67□□□□□ -2.14
ERCC4Q92889 SNORA25.3-201ENST00000363205 127 ntBASIC1.67□□□□□ -2.14
ERCC4Q92889 RNU6-947P-201ENST00000516264 106 ntBASIC1.67□□□□□ -2.14
ERCC4Q92889 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.67□□□□□ -2.14
ERCC4Q92889 Y_RNA.773-201ENST00000607168 90 ntBASIC1.67□□□□□ -2.14
ERCC4Q92889 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
ERCC4Q92889 SNORA63.5-201ENST00000363548 123 ntBASIC1.66□□□□□ -2.14
ERCC4Q92889 RNU1-42P-201ENST00000364033 160 ntBASIC1.66□□□□□ -2.14
ERCC4Q92889 RNU6-106P-201ENST00000384405 107 ntBASIC1.66□□□□□ -2.14
ERCC4Q92889 RNU6-342P-201ENST00000384521 104 ntBASIC1.66□□□□□ -2.14
ERCC4Q92889 MT-TN-201ENST00000387400 73 ntBASIC1.66□□□□□ -2.14
ERCC4Q92889 AL645939.4-201ENST00000604495 135 ntBASIC1.66□□□□□ -2.14
ERCC4Q92889 AL162726.3-218ENST00000636401 95 ntBASIC1.66□□□□□ -2.14
ERCC4Q92889 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.66□□□□□ -2.14
ERCC4Q92889 Y_RNA.49-201ENST00000362714 112 ntBASIC1.65□□□□□ -2.15
ERCC4Q92889 RNU6-396P-201ENST00000365369 105 ntBASIC1.65□□□□□ -2.15
ERCC4Q92889 AL354695.1-201ENST00000427935 228 ntBASIC1.65□□□□□ -2.15
ERCC4Q92889 AC068339.1-201ENST00000526965 141 ntBASIC1.65□□□□□ -2.15
ERCC4Q92889 Y_RNA.116-201ENST00000363292 103 ntBASIC1.64□□□□□ -2.15
ERCC4Q92889 U8.6-201ENST00000364939 135 ntBASIC1.64□□□□□ -2.15
ERCC4Q92889 RNU6-1014P-201ENST00000383940 103 ntBASIC1.64□□□□□ -2.15
ERCC4Q92889 SNORA18-201ENST00000384416 132 ntBASIC1.64□□□□□ -2.15
ERCC4Q92889 MIR150-201ENST00000385048 84 ntBASIC1.64□□□□□ -2.15
ERCC4Q92889 MIR563-201ENST00000385080 79 ntBASIC1.64□□□□□ -2.15
ERCC4Q92889 SNORA17.3-201ENST00000391159 129 ntBASIC1.64□□□□□ -2.15
ERCC4Q92889 RNU6-1086P-201ENST00000410930 100 ntBASIC1.64□□□□□ -2.15
ERCC4Q92889 RNA5SP247-201ENST00000411181 105 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 203.9 ms