Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 RNU7-56P-201ENST00000458744 62 ntBASIC0.38□□□□□ -2.35
SHROOM3Q8TF72 RNU6-830P-201ENST00000516353 107 ntBASIC0.38□□□□□ -2.35
SHROOM3Q8TF72 AC011195.1-201ENST00000578177 177 ntBASIC0.38□□□□□ -2.35
SHROOM3Q8TF72 MIR4744-201ENST00000581563 82 ntBASIC0.38□□□□□ -2.35
SHROOM3Q8TF72 MIR4305-201ENST00000583252 102 ntBASIC0.38□□□□□ -2.35
SHROOM3Q8TF72 AC062037.2-201ENST00000610137 73 ntBASIC0.38□□□□□ -2.35
SHROOM3Q8TF72 AC091932.4-201ENST00000623386 200 ntBASIC0.38□□□□□ -2.35
SHROOM3Q8TF72 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.38□□□□□ -2.35
SHROOM3Q8TF72 Y_RNA.42-201ENST00000362660 108 ntBASIC0.37□□□□□ -2.35
SHROOM3Q8TF72 Y_RNA.410-201ENST00000383992 113 ntBASIC0.37□□□□□ -2.35
SHROOM3Q8TF72 SNORA20-201ENST00000384662 132 ntBASIC0.37□□□□□ -2.35
SHROOM3Q8TF72 RNU6-381P-201ENST00000391259 108 ntBASIC0.37□□□□□ -2.35
SHROOM3Q8TF72 RNU2-64P-201ENST00000411315 191 ntBASIC0.37□□□□□ -2.35
SHROOM3Q8TF72 AC002429.1-201ENST00000437672 148 ntBASIC0.37□□□□□ -2.35
SHROOM3Q8TF72 AL118496.2-201ENST00000448300 230 ntBASIC0.37□□□□□ -2.35
SHROOM3Q8TF72 AL138752.1-201ENST00000452964 351 ntBASIC0.37□□□□□ -2.35
SHROOM3Q8TF72 RNU7-185P-201ENST00000459215 60 ntBASIC0.37□□□□□ -2.35
SHROOM3Q8TF72 Y_RNA.668-201ENST00000516233 93 ntBASIC0.37□□□□□ -2.35
SHROOM3Q8TF72 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
SHROOM3Q8TF72 AC025627.3-201ENST00000582078 182 ntBASIC0.37□□□□□ -2.35
SHROOM3Q8TF72 Z97988.1-201ENST00000637697 135 ntBASIC0.37□□□□□ -2.35
SHROOM3Q8TF72 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.37□□□□□ -2.35
SHROOM3Q8TF72 MIR411-201ENST00000362239 96 ntBASIC0.37□□□□□ -2.35
SHROOM3Q8TF72 RNU4-16P-201ENST00000364737 141 ntBASIC0.37□□□□□ -2.35
SHROOM3Q8TF72 Y_RNA.477-201ENST00000384352 108 ntBASIC0.37□□□□□ -2.35
SHROOM3Q8TF72 MT-TF-201ENST00000387314 71 ntBASIC0.37□□□□□ -2.35
SHROOM3Q8TF72 MIR1257-201ENST00000408490 117 ntBASIC0.37□□□□□ -2.35
SHROOM3Q8TF72 AC015818.7-201ENST00000428754 109 ntBASIC0.37□□□□□ -2.35
SHROOM3Q8TF72 AC087499.7-201ENST00000441958 109 ntBASIC0.37□□□□□ -2.35
SHROOM3Q8TF72 AC113410.1-201ENST00000505029 247 ntBASIC0.37□□□□□ -2.35
SHROOM3Q8TF72 ACA64.5-201ENST00000516207 127 ntBASIC0.37□□□□□ -2.35
SHROOM3Q8TF72 RNU7-70P-201ENST00000516941 66 ntBASIC0.37□□□□□ -2.35
SHROOM3Q8TF72 MIR3152-201ENST00000579801 74 ntBASIC0.37□□□□□ -2.35
SHROOM3Q8TF72 MIR5197-201ENST00000583721 112 ntBASIC0.37□□□□□ -2.35
SHROOM3Q8TF72 AC104465.1-201ENST00000611365 139 ntBASIC0.37□□□□□ -2.35
SHROOM3Q8TF72 U4.1-201ENST00000620349 87 ntBASIC0.37□□□□□ -2.35
SHROOM3Q8TF72 RNU6-580P-201ENST00000365159 107 ntBASIC0.36□□□□□ -2.35
SHROOM3Q8TF72 MIR568-201ENST00000385036 95 ntBASIC0.36□□□□□ -2.35
SHROOM3Q8TF72 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
SHROOM3Q8TF72 SNORD77.3-201ENST00000391113 65 ntBASIC0.36□□□□□ -2.35
SHROOM3Q8TF72 RNA5SP222-201ENST00000411039 105 ntBASIC0.36□□□□□ -2.35
SHROOM3Q8TF72 AC006461.1-201ENST00000412637 326 ntBASIC0.36□□□□□ -2.35
SHROOM3Q8TF72 AC107297.1-201ENST00000459991 176 ntBASIC0.36□□□□□ -2.35
SHROOM3Q8TF72 MIR2115-201ENST00000516657 100 ntBASIC0.36□□□□□ -2.35
SHROOM3Q8TF72 MIR3128-201ENST00000581957 66 ntBASIC0.36□□□□□ -2.35
SHROOM3Q8TF72 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.36□□□□□ -2.35
SHROOM3Q8TF72 MIR1-1-201ENST00000362147 71 ntBASIC0.36□□□□□ -2.35
SHROOM3Q8TF72 Y_RNA.416-201ENST00000384014 113 ntBASIC0.36□□□□□ -2.35
SHROOM3Q8TF72 RNU6-643P-201ENST00000384018 107 ntBASIC0.36□□□□□ -2.35
SHROOM3Q8TF72 AL078595.1-201ENST00000404458 226 ntBASIC0.36□□□□□ -2.35
SHROOM3Q8TF72 RNU6-1190P-201ENST00000410811 104 ntBASIC0.36□□□□□ -2.35
SHROOM3Q8TF72 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.36□□□□□ -2.35
SHROOM3Q8TF72 AC021443.1-201ENST00000604478 211 ntBASIC0.36□□□□□ -2.35
SHROOM3Q8TF72 AC010332.2-201ENST00000613083 1904 ntBASIC0.35□□□□□ -2.35
SHROOM3Q8TF72 Y_RNA.149-201ENST00000363558 117 ntBASIC0.35□□□□□ -2.35
SHROOM3Q8TF72 Y_RNA.307-201ENST00000365022 117 ntBASIC0.35□□□□□ -2.35
SHROOM3Q8TF72 SNORA1-201ENST00000384107 130 ntBASIC0.35□□□□□ -2.35
SHROOM3Q8TF72 Y_RNA.626-201ENST00000411288 95 ntBASIC0.35□□□□□ -2.35
SHROOM3Q8TF72 AC067940.1-201ENST00000458411 300 ntBASIC0.35□□□□□ -2.35
SHROOM3Q8TF72 RNU6-1023P-201ENST00000516137 106 ntBASIC0.35□□□□□ -2.35
SHROOM3Q8TF72 SNORD36C-201ENST00000516733 66 ntBASIC0.35□□□□□ -2.35
SHROOM3Q8TF72 MIR3149-201ENST00000584629 83 ntBASIC0.35□□□□□ -2.35
SHROOM3Q8TF72 MIR18A-201ENST00000362310 71 ntBASIC0.34□□□□□ -2.35
SHROOM3Q8TF72 RNA5SP368-201ENST00000364298 116 ntBASIC0.34□□□□□ -2.35
SHROOM3Q8TF72 RNU6-934P-201ENST00000365154 107 ntBASIC0.34□□□□□ -2.35
SHROOM3Q8TF72 MIR140-201ENST00000385282 100 ntBASIC0.34□□□□□ -2.35
SHROOM3Q8TF72 SNORD83.1-201ENST00000411362 77 ntBASIC0.34□□□□□ -2.35
SHROOM3Q8TF72 RNU6-1299P-201ENST00000516316 100 ntBASIC0.34□□□□□ -2.35
SHROOM3Q8TF72 AC009779.6-201ENST00000603972 165 ntBASIC0.34□□□□□ -2.35
SHROOM3Q8TF72 MTND5P32-201ENST00000560711 1802 ntBASIC0.34□□□□□ -2.36
SHROOM3Q8TF72 SNORD18A-201ENST00000363753 72 ntBASIC0.34□□□□□ -2.36
SHROOM3Q8TF72 Y_RNA.447-201ENST00000384184 113 ntBASIC0.34□□□□□ -2.36
SHROOM3Q8TF72 RNU6-196P-201ENST00000384315 107 ntBASIC0.34□□□□□ -2.36
SHROOM3Q8TF72 RNU6-768P-201ENST00000384683 107 ntBASIC0.34□□□□□ -2.36
SHROOM3Q8TF72 MIR624-201ENST00000385217 97 ntBASIC0.34□□□□□ -2.36
SHROOM3Q8TF72 RNU6-1319P-201ENST00000390855 104 ntBASIC0.34□□□□□ -2.36
SHROOM3Q8TF72 RNU6-913P-201ENST00000390913 95 ntBASIC0.34□□□□□ -2.36
SHROOM3Q8TF72 RNU6-747P-201ENST00000390928 104 ntBASIC0.34□□□□□ -2.36
SHROOM3Q8TF72 RNU6-241P-201ENST00000391148 104 ntBASIC0.34□□□□□ -2.36
SHROOM3Q8TF72 RNU6-177P-201ENST00000411257 104 ntBASIC0.34□□□□□ -2.36
SHROOM3Q8TF72 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.34□□□□□ -2.36
SHROOM3Q8TF72 MIR18B-201ENST00000454574 71 ntBASIC0.34□□□□□ -2.36
SHROOM3Q8TF72 MTND1P19-201ENST00000511780 315 ntBASIC0.34□□□□□ -2.36
SHROOM3Q8TF72 Y_RNA.797-201ENST00000515977 94 ntBASIC0.34□□□□□ -2.36
SHROOM3Q8TF72 MIR4431-201ENST00000579990 94 ntBASIC0.34□□□□□ -2.36
SHROOM3Q8TF72 Y_RNA.8-201ENST00000362353 102 ntBASIC0.33□□□□□ -2.36
SHROOM3Q8TF72 Y_RNA.288-201ENST00000364854 92 ntBASIC0.33□□□□□ -2.36
SHROOM3Q8TF72 RNU6-1336P-201ENST00000383886 109 ntBASIC0.33□□□□□ -2.36
SHROOM3Q8TF72 MIR125B2-201ENST00000385128 89 ntBASIC0.33□□□□□ -2.36
SHROOM3Q8TF72 RNU6-578P-201ENST00000390980 103 ntBASIC0.33□□□□□ -2.36
SHROOM3Q8TF72 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.33□□□□□ -2.36
SHROOM3Q8TF72 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.33□□□□□ -2.36
SHROOM3Q8TF72 RNU7-80P-201ENST00000459562 61 ntBASIC0.33□□□□□ -2.36
SHROOM3Q8TF72 RNU6-388P-201ENST00000517012 105 ntBASIC0.33□□□□□ -2.36
SHROOM3Q8TF72 RNU6-389P-201ENST00000517048 105 ntBASIC0.33□□□□□ -2.36
SHROOM3Q8TF72 AL353765.1-201ENST00000605514 183 ntBASIC0.33□□□□□ -2.36
SHROOM3Q8TF72 SNORA25.18-201ENST00000607153 114 ntBASIC0.33□□□□□ -2.36
SHROOM3Q8TF72 RNU6-702P-201ENST00000364982 107 ntBASIC0.32□□□□□ -2.36
SHROOM3Q8TF72 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
SHROOM3Q8TF72 SNORD58.1-201ENST00000391313 66 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms