Protein–RNA interactions for Protein: Q8NEK5

ZNF548, Zinc finger protein 548, humanhuman

Predicted RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548Q8NEK5 Y_RNA.85-201ENST00000363014 111 ntBASIC1.45□□□□□ -2.18
ZNF548Q8NEK5 RNA5SP259-201ENST00000365541 109 ntBASIC1.45□□□□□ -2.18
ZNF548Q8NEK5 SNORA51.10-201ENST00000384418 136 ntBASIC1.45□□□□□ -2.18
ZNF548Q8NEK5 Y_RNA.531-201ENST00000384589 121 ntBASIC1.45□□□□□ -2.18
ZNF548Q8NEK5 Y_RNA.549-201ENST00000384657 102 ntBASIC1.45□□□□□ -2.18
ZNF548Q8NEK5 MIR520C-201ENST00000385005 87 ntBASIC1.45□□□□□ -2.18
ZNF548Q8NEK5 AL451046.2-201ENST00000403074 277 ntBASIC1.45□□□□□ -2.18
ZNF548Q8NEK5 MIR1287-201ENST00000408492 90 ntBASIC1.45□□□□□ -2.18
ZNF548Q8NEK5 AL512326.2-201ENST00000426359 151 ntBASIC1.45□□□□□ -2.18
ZNF548Q8NEK5 HSPE1P24-201ENST00000450782 238 ntBASIC1.45□□□□□ -2.18
ZNF548Q8NEK5 RPS23P4-201ENST00000487908 423 ntBASIC1.45□□□□□ -2.18
ZNF548Q8NEK5 RNU6-412P-201ENST00000516434 106 ntBASIC1.45□□□□□ -2.18
ZNF548Q8NEK5 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.45□□□□□ -2.18
ZNF548Q8NEK5 MIR4285-201ENST00000581001 85 ntBASIC1.45□□□□□ -2.18
ZNF548Q8NEK5 AL035470.1-201ENST00000622571 220 ntBASIC1.45□□□□□ -2.18
ZNF548Q8NEK5 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.45□□□□□ -2.18
ZNF548Q8NEK5 SNORA22.1-201ENST00000362701 134 ntBASIC1.44□□□□□ -2.18
ZNF548Q8NEK5 Y_RNA.362-201ENST00000365518 110 ntBASIC1.44□□□□□ -2.18
ZNF548Q8NEK5 SNORD12C-201ENST00000386307 89 ntBASIC1.44□□□□□ -2.18
ZNF548Q8NEK5 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.44□□□□□ -2.18
ZNF548Q8NEK5 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.44□□□□□ -2.18
ZNF548Q8NEK5 MIR3163-201ENST00000581592 73 ntBASIC1.44□□□□□ -2.18
ZNF548Q8NEK5 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
ZNF548Q8NEK5 Z97988.1-201ENST00000637697 135 ntBASIC1.44□□□□□ -2.18
ZNF548Q8NEK5 Y_RNA.171-201ENST00000363760 102 ntBASIC1.43□□□□□ -2.18
ZNF548Q8NEK5 RNU6-392P-201ENST00000364926 101 ntBASIC1.43□□□□□ -2.18
ZNF548Q8NEK5 MIR548D2-201ENST00000384955 97 ntBASIC1.43□□□□□ -2.18
ZNF548Q8NEK5 MIR759-201ENST00000390224 91 ntBASIC1.43□□□□□ -2.18
ZNF548Q8NEK5 MIR1304-201ENST00000408243 91 ntBASIC1.43□□□□□ -2.18
ZNF548Q8NEK5 RNU7-41P-201ENST00000515917 61 ntBASIC1.43□□□□□ -2.18
ZNF548Q8NEK5 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.43□□□□□ -2.18
ZNF548Q8NEK5 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.43□□□□□ -2.18
ZNF548Q8NEK5 RNU6-94P-201ENST00000607728 107 ntBASIC1.43□□□□□ -2.18
ZNF548Q8NEK5 AL157834.3-201ENST00000615543 103 ntBASIC1.43□□□□□ -2.18
ZNF548Q8NEK5 WWP1P1-201ENST00000466609 2769 ntBASIC1.42□□□□□ -2.18
ZNF548Q8NEK5 AP000648.3-201ENST00000623539 4507 ntBASIC1.42□□□□□ -2.18
ZNF548Q8NEK5 RNU6-1107P-201ENST00000364817 104 ntBASIC1.42□□□□□ -2.18
ZNF548Q8NEK5 Y_RNA.323-201ENST00000365157 109 ntBASIC1.42□□□□□ -2.18
ZNF548Q8NEK5 Y_RNA.344-201ENST00000365381 112 ntBASIC1.42□□□□□ -2.18
ZNF548Q8NEK5 RNU6-106P-201ENST00000384405 107 ntBASIC1.42□□□□□ -2.18
ZNF548Q8NEK5 RNU6-997P-201ENST00000384725 107 ntBASIC1.42□□□□□ -2.18
ZNF548Q8NEK5 HMGN1P33-201ENST00000432945 451 ntBASIC1.42□□□□□ -2.18
ZNF548Q8NEK5 RPL39P34-201ENST00000477141 156 ntBASIC1.42□□□□□ -2.18
ZNF548Q8NEK5 AC113410.1-201ENST00000505029 247 ntBASIC1.42□□□□□ -2.18
ZNF548Q8NEK5 MIR4422-201ENST00000581938 83 ntBASIC1.42□□□□□ -2.18
ZNF548Q8NEK5 AC087741.2-201ENST00000619415 172 ntBASIC1.42□□□□□ -2.18
ZNF548Q8NEK5 Y_RNA.299-201ENST00000364973 94 ntBASIC1.41□□□□□ -2.18
ZNF548Q8NEK5 RNU6-147P-201ENST00000383983 107 ntBASIC1.41□□□□□ -2.18
ZNF548Q8NEK5 Y_RNA.470-201ENST00000384307 117 ntBASIC1.41□□□□□ -2.18
ZNF548Q8NEK5 RPS3AP1-201ENST00000413190 320 ntBASIC1.41□□□□□ -2.18
ZNF548Q8NEK5 RNU7-113P-201ENST00000459273 62 ntBASIC1.41□□□□□ -2.18
ZNF548Q8NEK5 AC023790.1-201ENST00000482174 347 ntBASIC1.41□□□□□ -2.18
ZNF548Q8NEK5 SNORD111.1-201ENST00000516421 86 ntBASIC1.41□□□□□ -2.18
ZNF548Q8NEK5 MIR548AO-201ENST00000579992 96 ntBASIC1.41□□□□□ -2.18
ZNF548Q8NEK5 AL357312.1-201ENST00000603879 298 ntBASIC1.41□□□□□ -2.18
ZNF548Q8NEK5 MIR8065-201ENST00000620577 100 ntBASIC1.41□□□□□ -2.18
ZNF548Q8NEK5 MIR4251-201ENST00000635819 61 ntBASIC1.41□□□□□ -2.18
ZNF548Q8NEK5 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
ZNF548Q8NEK5 AL589743.1-201ENST00000551932 2712 ntBASIC1.4□□□□□ -2.18
ZNF548Q8NEK5 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.4□□□□□ -2.19
ZNF548Q8NEK5 SNORD115-19-201ENST00000363098 82 ntBASIC1.4□□□□□ -2.19
ZNF548Q8NEK5 Y_RNA.116-201ENST00000363292 103 ntBASIC1.4□□□□□ -2.19
ZNF548Q8NEK5 SNORD115-18-201ENST00000363293 82 ntBASIC1.4□□□□□ -2.19
ZNF548Q8NEK5 SNORD115-17-201ENST00000364612 82 ntBASIC1.4□□□□□ -2.19
ZNF548Q8NEK5 SNORA1.1-201ENST00000364671 133 ntBASIC1.4□□□□□ -2.19
ZNF548Q8NEK5 SNORA25.9-201ENST00000365087 128 ntBASIC1.4□□□□□ -2.19
ZNF548Q8NEK5 MIR499A-201ENST00000384903 122 ntBASIC1.4□□□□□ -2.19
ZNF548Q8NEK5 RNU4-69P-201ENST00000410677 143 ntBASIC1.4□□□□□ -2.19
ZNF548Q8NEK5 RNA5SP61-201ENST00000516453 100 ntBASIC1.4□□□□□ -2.19
ZNF548Q8NEK5 RNU6-922P-201ENST00000516753 99 ntBASIC1.4□□□□□ -2.19
ZNF548Q8NEK5 MIR3613-201ENST00000579844 87 ntBASIC1.4□□□□□ -2.19
ZNF548Q8NEK5 MIR3192-201ENST00000584920 77 ntBASIC1.4□□□□□ -2.19
ZNF548Q8NEK5 GHRLOS.1-201ENST00000610995 70 ntBASIC1.4□□□□□ -2.19
ZNF548Q8NEK5 Y_RNA.49-201ENST00000362714 112 ntBASIC1.39□□□□□ -2.19
ZNF548Q8NEK5 RNA5SP48-201ENST00000363969 126 ntBASIC1.39□□□□□ -2.19
ZNF548Q8NEK5 SNORD1A-201ENST00000364968 72 ntBASIC1.39□□□□□ -2.19
ZNF548Q8NEK5 RNU6-602P-201ENST00000411155 105 ntBASIC1.39□□□□□ -2.19
ZNF548Q8NEK5 MIR1270-201ENST00000459320 83 ntBASIC1.39□□□□□ -2.19
ZNF548Q8NEK5 AL096861.1-201ENST00000610899 123 ntBASIC1.39□□□□□ -2.19
ZNF548Q8NEK5 AL353770.2-201ENST00000620024 78 ntBASIC1.39□□□□□ -2.19
ZNF548Q8NEK5 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
ZNF548Q8NEK5 SNORA63.5-201ENST00000363548 123 ntBASIC1.38□□□□□ -2.19
ZNF548Q8NEK5 RNU6-1014P-201ENST00000383940 103 ntBASIC1.38□□□□□ -2.19
ZNF548Q8NEK5 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.38□□□□□ -2.19
ZNF548Q8NEK5 RNU1-78P-201ENST00000391248 165 ntBASIC1.38□□□□□ -2.19
ZNF548Q8NEK5 MIR1302-7-201ENST00000408841 72 ntBASIC1.38□□□□□ -2.19
ZNF548Q8NEK5 RNU6-554P-201ENST00000410466 106 ntBASIC1.38□□□□□ -2.19
ZNF548Q8NEK5 AC090844.1-201ENST00000422019 156 ntBASIC1.38□□□□□ -2.19
ZNF548Q8NEK5 snoU13.25-201ENST00000458945 104 ntBASIC1.38□□□□□ -2.19
ZNF548Q8NEK5 AC079140.2-201ENST00000506193 142 ntBASIC1.38□□□□□ -2.19
ZNF548Q8NEK5 RNA5SP445-201ENST00000515889 115 ntBASIC1.38□□□□□ -2.19
ZNF548Q8NEK5 RNU7-6P-201ENST00000516845 62 ntBASIC1.38□□□□□ -2.19
ZNF548Q8NEK5 AC019176.1-201ENST00000518519 225 ntBASIC1.38□□□□□ -2.19
ZNF548Q8NEK5 AP003716.2-201ENST00000528260 108 ntBASIC1.38□□□□□ -2.19
ZNF548Q8NEK5 MIR548AE2-201ENST00000583456 67 ntBASIC1.38□□□□□ -2.19
ZNF548Q8NEK5 uc_338.28-201ENST00000612082 187 ntBASIC1.38□□□□□ -2.19
ZNF548Q8NEK5 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.38□□□□□ -2.19
ZNF548Q8NEK5 SNORD33-201ENST00000362761 85 ntBASIC1.37□□□□□ -2.19
ZNF548Q8NEK5 Y_RNA.163-201ENST00000363702 113 ntBASIC1.37□□□□□ -2.19
ZNF548Q8NEK5 U8.6-201ENST00000364939 135 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 211 ms