Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 RNU4-36P-201ENST00000364294 144 ntBASIC2.02□□□□□ -2.09
PHC3Q8NDX5 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
PHC3Q8NDX5 AC019129.1-201ENST00000403786 261 ntBASIC2.02□□□□□ -2.09
PHC3Q8NDX5 SUMO2P12-201ENST00000405924 140 ntBASIC2.02□□□□□ -2.09
PHC3Q8NDX5 RNA5SP237-201ENST00000410414 113 ntBASIC2.02□□□□□ -2.09
PHC3Q8NDX5 Y_RNA.677-201ENST00000516401 85 ntBASIC2.02□□□□□ -2.09
PHC3Q8NDX5 RNU7-35P-201ENST00000517174 62 ntBASIC2.02□□□□□ -2.09
PHC3Q8NDX5 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.02□□□□□ -2.09
PHC3Q8NDX5 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.02□□□□□ -2.09
PHC3Q8NDX5 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.01□□□□□ -2.09
PHC3Q8NDX5 SNORA25.3-201ENST00000363205 127 ntBASIC2.01□□□□□ -2.09
PHC3Q8NDX5 Y_RNA.544-201ENST00000384650 113 ntBASIC2.01□□□□□ -2.09
PHC3Q8NDX5 MIR504-201ENST00000385065 83 ntBASIC2.01□□□□□ -2.09
PHC3Q8NDX5 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.01□□□□□ -2.09
PHC3Q8NDX5 RNU6-1086P-201ENST00000410930 100 ntBASIC2.01□□□□□ -2.09
PHC3Q8NDX5 AC027119.1-201ENST00000440877 241 ntBASIC2.01□□□□□ -2.09
PHC3Q8NDX5 RN7SL274P-201ENST00000492268 272 ntBASIC2.01□□□□□ -2.09
PHC3Q8NDX5 AC008834.1-201ENST00000511612 175 ntBASIC2.01□□□□□ -2.09
PHC3Q8NDX5 MIR2115-201ENST00000516657 100 ntBASIC2.01□□□□□ -2.09
PHC3Q8NDX5 RNU6-537P-201ENST00000517277 103 ntBASIC2.01□□□□□ -2.09
PHC3Q8NDX5 AP000753.3-201ENST00000604083 169 ntBASIC2.01□□□□□ -2.09
PHC3Q8NDX5 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.01□□□□□ -2.09
PHC3Q8NDX5 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
PHC3Q8NDX5 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2□□□□□ -2.09
PHC3Q8NDX5 SNORA7.5-201ENST00000410672 110 ntBASIC2□□□□□ -2.09
PHC3Q8NDX5 MIR1270-201ENST00000459320 83 ntBASIC2□□□□□ -2.09
PHC3Q8NDX5 RNU7-79P-201ENST00000516082 62 ntBASIC2□□□□□ -2.09
PHC3Q8NDX5 DEFB131E-201ENST00000532329 154 ntBASIC2□□□□□ -2.09
PHC3Q8NDX5 PRELID3BP2-201ENST00000605362 201 ntBASIC2□□□□□ -2.09
PHC3Q8NDX5 Y_RNA.10-201ENST00000362371 110 ntBASIC1.99□□□□□ -2.09
PHC3Q8NDX5 RNU6-1237P-201ENST00000384777 107 ntBASIC1.99□□□□□ -2.09
PHC3Q8NDX5 RNU11-2P-201ENST00000516898 142 ntBASIC1.99□□□□□ -2.09
PHC3Q8NDX5 MIR3122-201ENST00000577243 73 ntBASIC1.99□□□□□ -2.09
PHC3Q8NDX5 MIR4422-201ENST00000581938 83 ntBASIC1.99□□□□□ -2.09
PHC3Q8NDX5 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.99□□□□□ -2.09
PHC3Q8NDX5 Y_RNA.818-201ENST00000618813 71 ntBASIC1.99□□□□□ -2.09
PHC3Q8NDX5 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
PHC3Q8NDX5 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.98□□□□□ -2.09
PHC3Q8NDX5 Y_RNA.360-201ENST00000365512 102 ntBASIC1.98□□□□□ -2.09
PHC3Q8NDX5 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.98□□□□□ -2.09
PHC3Q8NDX5 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
PHC3Q8NDX5 RNU6-904P-201ENST00000516206 101 ntBASIC1.98□□□□□ -2.09
PHC3Q8NDX5 RNU6-521P-201ENST00000516663 105 ntBASIC1.98□□□□□ -2.09
PHC3Q8NDX5 Y_RNA.694-201ENST00000516677 117 ntBASIC1.98□□□□□ -2.09
PHC3Q8NDX5 MIR4694-201ENST00000578534 80 ntBASIC1.98□□□□□ -2.09
PHC3Q8NDX5 MIR3664-201ENST00000579074 99 ntBASIC1.98□□□□□ -2.09
PHC3Q8NDX5 MIR4524B-201ENST00000581569 115 ntBASIC1.98□□□□□ -2.09
PHC3Q8NDX5 MIR4264-201ENST00000583520 66 ntBASIC1.98□□□□□ -2.09
PHC3Q8NDX5 AP000942.3-201ENST00000603702 160 ntBASIC1.98□□□□□ -2.09
PHC3Q8NDX5 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.98□□□□□ -2.09
PHC3Q8NDX5 MIR103A2-201ENST00000362154 78 ntBASIC1.97□□□□□ -2.09
PHC3Q8NDX5 RNY3P2-201ENST00000362918 102 ntBASIC1.97□□□□□ -2.09
PHC3Q8NDX5 SNORD115-35-201ENST00000365122 82 ntBASIC1.97□□□□□ -2.09
PHC3Q8NDX5 RNU1-78P-201ENST00000391248 165 ntBASIC1.97□□□□□ -2.09
PHC3Q8NDX5 MIR1302-7-201ENST00000408841 72 ntBASIC1.97□□□□□ -2.09
PHC3Q8NDX5 RNU7-2P-201ENST00000516096 62 ntBASIC1.97□□□□□ -2.09
PHC3Q8NDX5 RNU6-1018P-201ENST00000516577 106 ntBASIC1.97□□□□□ -2.09
PHC3Q8NDX5 MIR5089-201ENST00000580047 84 ntBASIC1.97□□□□□ -2.09
PHC3Q8NDX5 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
PHC3Q8NDX5 MT-TN-201ENST00000387400 73 ntBASIC1.96□□□□□ -2.1
PHC3Q8NDX5 AL445685.2-201ENST00000422551 342 ntBASIC1.96□□□□□ -2.1
PHC3Q8NDX5 AC245517.4-201ENST00000448601 281 ntBASIC1.96□□□□□ -2.1
PHC3Q8NDX5 snoU13.2-201ENST00000459201 104 ntBASIC1.96□□□□□ -2.1
PHC3Q8NDX5 snoU13.15-201ENST00000459407 104 ntBASIC1.96□□□□□ -2.1
PHC3Q8NDX5 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.96□□□□□ -2.1
PHC3Q8NDX5 RNA5SP445-201ENST00000515889 115 ntBASIC1.96□□□□□ -2.1
PHC3Q8NDX5 AL512310.8-201ENST00000550183 120 ntBASIC1.96□□□□□ -2.1
PHC3Q8NDX5 AL512310.12-203ENST00000640543 90 ntBASIC1.96□□□□□ -2.1
PHC3Q8NDX5 RNA5SP264-201ENST00000363115 107 ntBASIC1.95□□□□□ -2.1
PHC3Q8NDX5 SNORD114-10-201ENST00000363409 72 ntBASIC1.95□□□□□ -2.1
PHC3Q8NDX5 MIR590-201ENST00000385008 97 ntBASIC1.95□□□□□ -2.1
PHC3Q8NDX5 MIR605-201ENST00000385078 83 ntBASIC1.95□□□□□ -2.1
PHC3Q8NDX5 AC244023.1-201ENST00000426884 112 ntBASIC1.95□□□□□ -2.1
PHC3Q8NDX5 SNORA40.13-201ENST00000516379 120 ntBASIC1.95□□□□□ -2.1
PHC3Q8NDX5 RNA5SP170-201ENST00000517150 101 ntBASIC1.95□□□□□ -2.1
PHC3Q8NDX5 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.95□□□□□ -2.1
PHC3Q8NDX5 AC242498.1-201ENST00000604134 111 ntBASIC1.95□□□□□ -2.1
PHC3Q8NDX5 AP001318.4-201ENST00000616637 121 ntBASIC1.95□□□□□ -2.1
PHC3Q8NDX5 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
PHC3Q8NDX5 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
PHC3Q8NDX5 AL161722.3-201ENST00000605789 2983 ntBASIC1.95□□□□□ -2.1
PHC3Q8NDX5 SNORD114-1-201ENST00000362705 72 ntBASIC1.94□□□□□ -2.1
PHC3Q8NDX5 RNU6-832P-201ENST00000363319 107 ntBASIC1.94□□□□□ -2.1
PHC3Q8NDX5 RNU6-1099P-201ENST00000363533 107 ntBASIC1.94□□□□□ -2.1
PHC3Q8NDX5 MIR206-201ENST00000384872 86 ntBASIC1.94□□□□□ -2.1
PHC3Q8NDX5 MIR588-201ENST00000384900 83 ntBASIC1.94□□□□□ -2.1
PHC3Q8NDX5 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
PHC3Q8NDX5 RNU6-679P-201ENST00000391003 106 ntBASIC1.94□□□□□ -2.1
PHC3Q8NDX5 MIR934-201ENST00000401241 83 ntBASIC1.94□□□□□ -2.1
PHC3Q8NDX5 SNORA19.1-201ENST00000410656 129 ntBASIC1.94□□□□□ -2.1
PHC3Q8NDX5 snoU13.25-201ENST00000458945 104 ntBASIC1.94□□□□□ -2.1
PHC3Q8NDX5 RNA5SP182-201ENST00000516064 82 ntBASIC1.94□□□□□ -2.1
PHC3Q8NDX5 RNU6-970P-201ENST00000516312 107 ntBASIC1.94□□□□□ -2.1
PHC3Q8NDX5 AP003716.2-201ENST00000528260 108 ntBASIC1.94□□□□□ -2.1
PHC3Q8NDX5 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.94□□□□□ -2.1
PHC3Q8NDX5 AC141846.1-201ENST00000568348 142 ntBASIC1.94□□□□□ -2.1
PHC3Q8NDX5 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.94□□□□□ -2.1
PHC3Q8NDX5 MIR4769-201ENST00000584126 77 ntBASIC1.94□□□□□ -2.1
PHC3Q8NDX5 AL662814.1-201ENST00000617364 121 ntBASIC1.94□□□□□ -2.1
PHC3Q8NDX5 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 190 ms