Protein–RNA interactions for Protein: Q8NA47

CCDC63, Coiled-coil domain-containing protein 63, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC63Q8NA47 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.54□□□□□ -2.32
CCDC63Q8NA47 MTND5P32-201ENST00000560711 1802 ntBASIC0.54□□□□□ -2.32
CCDC63Q8NA47 SNORA22.1-201ENST00000362701 134 ntBASIC0.53□□□□□ -2.32
CCDC63Q8NA47 SNORA25.7-201ENST00000364375 127 ntBASIC0.53□□□□□ -2.32
CCDC63Q8NA47 RNU6-1237P-201ENST00000384777 107 ntBASIC0.53□□□□□ -2.32
CCDC63Q8NA47 MIR140-201ENST00000385282 100 ntBASIC0.53□□□□□ -2.32
CCDC63Q8NA47 AL603825.1-201ENST00000438481 80 ntBASIC0.53□□□□□ -2.32
CCDC63Q8NA47 RNU7-156P-201ENST00000517214 74 ntBASIC0.53□□□□□ -2.32
CCDC63Q8NA47 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.53□□□□□ -2.32
CCDC63Q8NA47 AC130289.1-201ENST00000577321 73 ntBASIC0.53□□□□□ -2.32
CCDC63Q8NA47 RNU4-16P-201ENST00000364737 141 ntBASIC0.52□□□□□ -2.33
CCDC63Q8NA47 RNU6-364P-201ENST00000384387 107 ntBASIC0.52□□□□□ -2.33
CCDC63Q8NA47 SNORA20-201ENST00000384662 132 ntBASIC0.52□□□□□ -2.33
CCDC63Q8NA47 SNORD100-201ENST00000408573 76 ntBASIC0.52□□□□□ -2.33
CCDC63Q8NA47 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.52□□□□□ -2.33
CCDC63Q8NA47 RNU7-70P-201ENST00000516941 66 ntBASIC0.52□□□□□ -2.33
CCDC63Q8NA47 SNORA4-201ENST00000584302 138 ntBASIC0.52□□□□□ -2.33
CCDC63Q8NA47 Z83818.1-201ENST00000603584 150 ntBASIC0.52□□□□□ -2.33
CCDC63Q8NA47 MIR8066-201ENST00000617280 78 ntBASIC0.52□□□□□ -2.33
CCDC63Q8NA47 Y_RNA.52-201ENST00000362760 96 ntBASIC0.51□□□□□ -2.33
CCDC63Q8NA47 Y_RNA.274-201ENST00000364714 101 ntBASIC0.51□□□□□ -2.33
CCDC63Q8NA47 RNU6-768P-201ENST00000384683 107 ntBASIC0.51□□□□□ -2.33
CCDC63Q8NA47 RNU6-447P-201ENST00000410293 104 ntBASIC0.51□□□□□ -2.33
CCDC63Q8NA47 RNU6-1118P-201ENST00000410382 104 ntBASIC0.51□□□□□ -2.33
CCDC63Q8NA47 RNU6-1076P-201ENST00000410397 104 ntBASIC0.51□□□□□ -2.33
CCDC63Q8NA47 RNU6-355P-201ENST00000410427 104 ntBASIC0.51□□□□□ -2.33
CCDC63Q8NA47 RNU6-791P-201ENST00000410467 104 ntBASIC0.51□□□□□ -2.33
CCDC63Q8NA47 RNU6-705P-201ENST00000410601 104 ntBASIC0.51□□□□□ -2.33
CCDC63Q8NA47 RNU6-1100P-201ENST00000410691 104 ntBASIC0.51□□□□□ -2.33
CCDC63Q8NA47 RNU6-860P-201ENST00000410860 104 ntBASIC0.51□□□□□ -2.33
CCDC63Q8NA47 RNU6-1217P-201ENST00000411276 104 ntBASIC0.51□□□□□ -2.33
CCDC63Q8NA47 RNU6-785P-201ENST00000411324 104 ntBASIC0.51□□□□□ -2.33
CCDC63Q8NA47 AC096949.1-201ENST00000412047 152 ntBASIC0.51□□□□□ -2.33
CCDC63Q8NA47 RNU6-1219P-201ENST00000516143 112 ntBASIC0.51□□□□□ -2.33
CCDC63Q8NA47 RNU6-1258P-201ENST00000516911 111 ntBASIC0.51□□□□□ -2.33
CCDC63Q8NA47 AC141846.1-201ENST00000568348 142 ntBASIC0.51□□□□□ -2.33
CCDC63Q8NA47 U6.90-201ENST00000614007 104 ntBASIC0.51□□□□□ -2.33
CCDC63Q8NA47 U6.70-201ENST00000620287 104 ntBASIC0.51□□□□□ -2.33
CCDC63Q8NA47 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
CCDC63Q8NA47 MIR96-201ENST00000362288 78 ntBASIC0.5□□□□□ -2.33
CCDC63Q8NA47 RNU6-1020P-201ENST00000363684 107 ntBASIC0.5□□□□□ -2.33
CCDC63Q8NA47 SNORD18A-201ENST00000363753 72 ntBASIC0.5□□□□□ -2.33
CCDC63Q8NA47 RNU6-1082P-201ENST00000364574 107 ntBASIC0.5□□□□□ -2.33
CCDC63Q8NA47 Y_RNA.393-201ENST00000383936 102 ntBASIC0.5□□□□□ -2.33
CCDC63Q8NA47 U8.15-201ENST00000390947 134 ntBASIC0.5□□□□□ -2.33
CCDC63Q8NA47 RNA5SP237-201ENST00000410414 113 ntBASIC0.5□□□□□ -2.33
CCDC63Q8NA47 AC002350.1-201ENST00000490759 375 ntBASIC0.5□□□□□ -2.33
CCDC63Q8NA47 RNA5SP236-201ENST00000516169 116 ntBASIC0.5□□□□□ -2.33
CCDC63Q8NA47 AC022559.1-201ENST00000520905 205 ntBASIC0.5□□□□□ -2.33
CCDC63Q8NA47 CYP3A137P-201ENST00000562436 69 ntBASIC0.5□□□□□ -2.33
CCDC63Q8NA47 Y_RNA.42-201ENST00000362660 108 ntBASIC0.49□□□□□ -2.33
CCDC63Q8NA47 RNU1-93P-201ENST00000364704 169 ntBASIC0.49□□□□□ -2.33
CCDC63Q8NA47 Y_RNA.521-201ENST00000384560 114 ntBASIC0.49□□□□□ -2.33
CCDC63Q8NA47 SNORD93-201ENST00000408813 74 ntBASIC0.49□□□□□ -2.33
CCDC63Q8NA47 RN7SKP12-201ENST00000516275 143 ntBASIC0.49□□□□□ -2.33
CCDC63Q8NA47 Y_RNA.757-201ENST00000578934 114 ntBASIC0.49□□□□□ -2.33
CCDC63Q8NA47 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.48□□□□□ -2.33
CCDC63Q8NA47 RNU6-349P-201ENST00000362402 107 ntBASIC0.48□□□□□ -2.33
CCDC63Q8NA47 Y_RNA.233-201ENST00000364407 101 ntBASIC0.48□□□□□ -2.33
CCDC63Q8NA47 RNU6-312P-201ENST00000364629 107 ntBASIC0.48□□□□□ -2.33
CCDC63Q8NA47 RNU4-45P-201ENST00000365469 141 ntBASIC0.48□□□□□ -2.33
CCDC63Q8NA47 RNY1P6-201ENST00000384193 109 ntBASIC0.48□□□□□ -2.33
CCDC63Q8NA47 RNU6-342P-201ENST00000384521 104 ntBASIC0.48□□□□□ -2.33
CCDC63Q8NA47 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.48□□□□□ -2.33
CCDC63Q8NA47 Y_RNA.171-201ENST00000363760 102 ntBASIC0.47□□□□□ -2.33
CCDC63Q8NA47 SNORA18-201ENST00000384416 132 ntBASIC0.47□□□□□ -2.33
CCDC63Q8NA47 Y_RNA.588-201ENST00000391254 102 ntBASIC0.47□□□□□ -2.33
CCDC63Q8NA47 RNU4-83P-201ENST00000410863 133 ntBASIC0.47□□□□□ -2.33
CCDC63Q8NA47 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.47□□□□□ -2.33
CCDC63Q8NA47 RNU6-448P-201ENST00000517052 107 ntBASIC0.47□□□□□ -2.33
CCDC63Q8NA47 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.47□□□□□ -2.33
CCDC63Q8NA47 RNU6-949P-201ENST00000384040 107 ntBASIC0.46□□□□□ -2.34
CCDC63Q8NA47 Y_RNA.489-201ENST00000384410 101 ntBASIC0.46□□□□□ -2.34
CCDC63Q8NA47 RNA5SP144-201ENST00000410846 116 ntBASIC0.46□□□□□ -2.34
CCDC63Q8NA47 Y_RNA.617-201ENST00000410920 90 ntBASIC0.46□□□□□ -2.34
CCDC63Q8NA47 AC107027.2-201ENST00000512197 115 ntBASIC0.46□□□□□ -2.34
CCDC63Q8NA47 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.46□□□□□ -2.34
CCDC63Q8NA47 RNU6-379P-201ENST00000363813 104 ntBASIC0.45□□□□□ -2.34
CCDC63Q8NA47 RNY1P13-201ENST00000365030 105 ntBASIC0.45□□□□□ -2.34
CCDC63Q8NA47 AC114737.2-201ENST00000421583 173 ntBASIC0.45□□□□□ -2.34
CCDC63Q8NA47 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.45□□□□□ -2.34
CCDC63Q8NA47 Y_RNA.644-201ENST00000459006 113 ntBASIC0.45□□□□□ -2.34
CCDC63Q8NA47 SNORA68.3-201ENST00000515906 83 ntBASIC0.45□□□□□ -2.34
CCDC63Q8NA47 Y_RNA.674-201ENST00000516362 113 ntBASIC0.45□□□□□ -2.34
CCDC63Q8NA47 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.45□□□□□ -2.34
CCDC63Q8NA47 Y_RNA.13-201ENST00000362403 112 ntBASIC0.44□□□□□ -2.34
CCDC63Q8NA47 RNA5SP347-201ENST00000362445 119 ntBASIC0.44□□□□□ -2.34
CCDC63Q8NA47 Y_RNA.297-201ENST00000364950 91 ntBASIC0.44□□□□□ -2.34
CCDC63Q8NA47 Y_RNA.470-201ENST00000384307 117 ntBASIC0.44□□□□□ -2.34
CCDC63Q8NA47 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
CCDC63Q8NA47 RPL39P25-201ENST00000449384 154 ntBASIC0.44□□□□□ -2.34
CCDC63Q8NA47 RNU6-893P-201ENST00000458841 100 ntBASIC0.44□□□□□ -2.34
CCDC63Q8NA47 MIR4491-201ENST00000581087 68 ntBASIC0.44□□□□□ -2.34
CCDC63Q8NA47 MIR6504-201ENST00000613520 61 ntBASIC0.44□□□□□ -2.34
CCDC63Q8NA47 MIR6082-201ENST00000613604 109 ntBASIC0.44□□□□□ -2.34
CCDC63Q8NA47 Y_RNA.188-201ENST00000363952 111 ntBASIC0.43□□□□□ -2.34
CCDC63Q8NA47 Y_RNA.191-201ENST00000363972 113 ntBASIC0.43□□□□□ -2.34
CCDC63Q8NA47 Y_RNA.337-201ENST00000365312 102 ntBASIC0.43□□□□□ -2.34
CCDC63Q8NA47 Y_RNA.515-201ENST00000384535 112 ntBASIC0.43□□□□□ -2.34
CCDC63Q8NA47 RNU6-1086P-201ENST00000410930 100 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 177.9 ms