Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.34□□□□□ -2.46
ZIC4Q8N9L1 HMGN2P22-201ENST00000427588 175 ntBASIC-0.34□□□□□ -2.46
ZIC4Q8N9L1 SNRPGP8-201ENST00000454064 226 ntBASIC-0.34□□□□□ -2.46
ZIC4Q8N9L1 RNU6-507P-201ENST00000516045 100 ntBASIC-0.34□□□□□ -2.46
ZIC4Q8N9L1 RNU6-1299P-201ENST00000516316 100 ntBASIC-0.34□□□□□ -2.46
ZIC4Q8N9L1 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.34□□□□□ -2.46
ZIC4Q8N9L1 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-0.34□□□□□ -2.46
ZIC4Q8N9L1 MIR4802-201ENST00000581881 80 ntBASIC-0.34□□□□□ -2.46
ZIC4Q8N9L1 AP001180.6-201ENST00000584918 159 ntBASIC-0.34□□□□□ -2.46
ZIC4Q8N9L1 AL132765.2-201ENST00000610812 351 ntBASIC-0.34□□□□□ -2.46
ZIC4Q8N9L1 AC006157.1-201ENST00000611750 366 ntBASIC-0.34□□□□□ -2.46
ZIC4Q8N9L1 AC021613.1-201ENST00000623880 111 ntBASIC-0.34□□□□□ -2.46
ZIC4Q8N9L1 snoU18.1-201ENST00000629629 71 ntBASIC-0.34□□□□□ -2.46
ZIC4Q8N9L1 Y_RNA.24-201ENST00000362508 103 ntBASIC-0.35□□□□□ -2.47
ZIC4Q8N9L1 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.35□□□□□ -2.47
ZIC4Q8N9L1 SNORA22B-201ENST00000383876 138 ntBASIC-0.35□□□□□ -2.47
ZIC4Q8N9L1 Y_RNA.445-201ENST00000384168 102 ntBASIC-0.35□□□□□ -2.47
ZIC4Q8N9L1 MIR626-201ENST00000385032 94 ntBASIC-0.35□□□□□ -2.47
ZIC4Q8N9L1 MTND4LP11-201ENST00000422184 280 ntBASIC-0.35□□□□□ -2.47
ZIC4Q8N9L1 RNU6-897P-201ENST00000517135 105 ntBASIC-0.35□□□□□ -2.47
ZIC4Q8N9L1 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.35□□□□□ -2.47
ZIC4Q8N9L1 AL442067.1-201ENST00000613261 223 ntBASIC-0.35□□□□□ -2.47
ZIC4Q8N9L1 RNA5SP403-201ENST00000363598 108 ntBASIC-0.36□□□□□ -2.47
ZIC4Q8N9L1 Y_RNA.248-201ENST00000364501 109 ntBASIC-0.36□□□□□ -2.47
ZIC4Q8N9L1 SNORD114-12-201ENST00000365400 75 ntBASIC-0.36□□□□□ -2.47
ZIC4Q8N9L1 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.36□□□□□ -2.47
ZIC4Q8N9L1 SNORA32.3-201ENST00000384772 121 ntBASIC-0.36□□□□□ -2.47
ZIC4Q8N9L1 MT-TT-201ENST00000387460 66 ntBASIC-0.36□□□□□ -2.47
ZIC4Q8N9L1 SNORD41.1-201ENST00000391000 69 ntBASIC-0.36□□□□□ -2.47
ZIC4Q8N9L1 RNU6-1228P-201ENST00000391014 107 ntBASIC-0.36□□□□□ -2.47
ZIC4Q8N9L1 MIR1302-11-201ENST00000408051 138 ntBASIC-0.36□□□□□ -2.47
ZIC4Q8N9L1 MIR1302-9-201ENST00000408365 138 ntBASIC-0.36□□□□□ -2.47
ZIC4Q8N9L1 MIR1302-10-201ENST00000408734 138 ntBASIC-0.36□□□□□ -2.47
ZIC4Q8N9L1 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.36□□□□□ -2.47
ZIC4Q8N9L1 Y_RNA.632-201ENST00000459189 102 ntBASIC-0.36□□□□□ -2.47
ZIC4Q8N9L1 RNU7-80P-201ENST00000459562 61 ntBASIC-0.36□□□□□ -2.47
ZIC4Q8N9L1 SNORD19B-201ENST00000459623 84 ntBASIC-0.36□□□□□ -2.47
ZIC4Q8N9L1 RNU6-976P-201ENST00000516086 111 ntBASIC-0.36□□□□□ -2.47
ZIC4Q8N9L1 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-0.36□□□□□ -2.47
ZIC4Q8N9L1 MIR378D2-201ENST00000580636 98 ntBASIC-0.36□□□□□ -2.47
ZIC4Q8N9L1 AC011921.3-201ENST00000605540 361 ntBASIC-0.36□□□□□ -2.47
ZIC4Q8N9L1 MIR1302-2-201ENST00000607096 138 ntBASIC-0.36□□□□□ -2.47
ZIC4Q8N9L1 MIR1302-1-201ENST00000637932 143 ntBASIC-0.36□□□□□ -2.47
ZIC4Q8N9L1 MTND5P32-201ENST00000560711 1802 ntBASIC-0.36□□□□□ -2.47
ZIC4Q8N9L1 RNU4-73P-201ENST00000363164 141 ntBASIC-0.37□□□□□ -2.47
ZIC4Q8N9L1 Y_RNA.152-201ENST00000363578 100 ntBASIC-0.37□□□□□ -2.47
ZIC4Q8N9L1 Y_RNA.183-201ENST00000363882 113 ntBASIC-0.37□□□□□ -2.47
ZIC4Q8N9L1 Y_RNA.315-201ENST00000365117 102 ntBASIC-0.37□□□□□ -2.47
ZIC4Q8N9L1 RNU6-290P-201ENST00000365212 101 ntBASIC-0.37□□□□□ -2.47
ZIC4Q8N9L1 Y_RNA.394-201ENST00000383942 103 ntBASIC-0.37□□□□□ -2.47
ZIC4Q8N9L1 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.37□□□□□ -2.47
ZIC4Q8N9L1 Y_RNA.454-201ENST00000384224 113 ntBASIC-0.37□□□□□ -2.47
ZIC4Q8N9L1 MIR106A-201ENST00000384870 81 ntBASIC-0.37□□□□□ -2.47
ZIC4Q8N9L1 MIR876-201ENST00000401147 81 ntBASIC-0.37□□□□□ -2.47
ZIC4Q8N9L1 Z95118.1-201ENST00000421372 247 ntBASIC-0.37□□□□□ -2.47
ZIC4Q8N9L1 AL731563.1-201ENST00000442202 214 ntBASIC-0.37□□□□□ -2.47
ZIC4Q8N9L1 CR383656.4-201ENST00000546909 122 ntBASIC-0.37□□□□□ -2.47
ZIC4Q8N9L1 AC138749.4-201ENST00000563970 127 ntBASIC-0.37□□□□□ -2.47
ZIC4Q8N9L1 MIR3129-201ENST00000581095 76 ntBASIC-0.37□□□□□ -2.47
ZIC4Q8N9L1 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-0.37□□□□□ -2.47
ZIC4Q8N9L1 AC006006.1-201ENST00000603082 144 ntBASIC-0.37□□□□□ -2.47
ZIC4Q8N9L1 MIR548AZ-201ENST00000616567 95 ntBASIC-0.37□□□□□ -2.47
ZIC4Q8N9L1 uc_338.36-201ENST00000622331 158 ntBASIC-0.37□□□□□ -2.47
ZIC4Q8N9L1 MIR6514-201ENST00000622549 70 ntBASIC-0.37□□□□□ -2.47
ZIC4Q8N9L1 snoU2_19.2-201ENST00000363024 80 ntBASIC-0.38□□□□□ -2.47
ZIC4Q8N9L1 RNU4-58P-201ENST00000363192 141 ntBASIC-0.38□□□□□ -2.47
ZIC4Q8N9L1 RNA5SP133-201ENST00000363368 119 ntBASIC-0.38□□□□□ -2.47
ZIC4Q8N9L1 Y_RNA.142-201ENST00000363491 102 ntBASIC-0.38□□□□□ -2.47
ZIC4Q8N9L1 Y_RNA.154-201ENST00000363624 102 ntBASIC-0.38□□□□□ -2.47
ZIC4Q8N9L1 RNU6-326P-201ENST00000365480 107 ntBASIC-0.38□□□□□ -2.47
ZIC4Q8N9L1 Y_RNA.542-201ENST00000384641 111 ntBASIC-0.38□□□□□ -2.47
ZIC4Q8N9L1 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.38□□□□□ -2.47
ZIC4Q8N9L1 RNA5SP300-201ENST00000391197 107 ntBASIC-0.38□□□□□ -2.47
ZIC4Q8N9L1 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.38□□□□□ -2.47
ZIC4Q8N9L1 AC138393.2-201ENST00000414742 246 ntBASIC-0.38□□□□□ -2.47
ZIC4Q8N9L1 RPL21P38-201ENST00000418090 167 ntBASIC-0.38□□□□□ -2.47
ZIC4Q8N9L1 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-0.38□□□□□ -2.47
ZIC4Q8N9L1 AC098614.3-201ENST00000438957 440 ntBASIC-0.38□□□□□ -2.47
ZIC4Q8N9L1 AC109327.2-201ENST00000448339 378 ntBASIC-0.38□□□□□ -2.47
ZIC4Q8N9L1 SNORA27.4-201ENST00000516650 95 ntBASIC-0.38□□□□□ -2.47
ZIC4Q8N9L1 RNU7-35P-201ENST00000517174 62 ntBASIC-0.38□□□□□ -2.47
ZIC4Q8N9L1 RNU2-60P-201ENST00000517290 128 ntBASIC-0.38□□□□□ -2.47
ZIC4Q8N9L1 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.38□□□□□ -2.47
ZIC4Q8N9L1 MIR3666-201ENST00000607845 111 ntBASIC-0.38□□□□□ -2.47
ZIC4Q8N9L1 U7.6-201ENST00000610841 64 ntBASIC-0.38□□□□□ -2.47
ZIC4Q8N9L1 UBE2WP1-201ENST00000362030 340 ntBASIC-0.39□□□□□ -2.47
ZIC4Q8N9L1 MIR655-201ENST00000362159 97 ntBASIC-0.39□□□□□ -2.47
ZIC4Q8N9L1 MIR148A-201ENST00000362215 68 ntBASIC-0.39□□□□□ -2.47
ZIC4Q8N9L1 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.39□□□□□ -2.47
ZIC4Q8N9L1 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.39□□□□□ -2.47
ZIC4Q8N9L1 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.39□□□□□ -2.47
ZIC4Q8N9L1 snoU2_19.4-201ENST00000364329 80 ntBASIC-0.39□□□□□ -2.47
ZIC4Q8N9L1 RNU4-40P-201ENST00000364351 143 ntBASIC-0.39□□□□□ -2.47
ZIC4Q8N9L1 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.39□□□□□ -2.47
ZIC4Q8N9L1 Y_RNA.384-201ENST00000383909 102 ntBASIC-0.39□□□□□ -2.47
ZIC4Q8N9L1 RNY3P5-201ENST00000384127 102 ntBASIC-0.39□□□□□ -2.47
ZIC4Q8N9L1 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.39□□□□□ -2.47
ZIC4Q8N9L1 SNORA20-201ENST00000384662 132 ntBASIC-0.39□□□□□ -2.47
ZIC4Q8N9L1 MIR196A2-201ENST00000385189 110 ntBASIC-0.39□□□□□ -2.47
ZIC4Q8N9L1 SNORA75.1-201ENST00000391130 148 ntBASIC-0.39□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms