Protein–RNA interactions for Protein: Q8N6N2

TTC9B, Tetratricopeptide repeat protein 9B, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9BQ8N6N2 AC245047.7-201ENST00000440265 293 ntBASIC2.05□□□□□ -2.08
TTC9BQ8N6N2 RPS29P28-201ENST00000446439 141 ntBASIC2.05□□□□□ -2.08
TTC9BQ8N6N2 RPL23AP42-201ENST00000471152 471 ntBASIC2.05□□□□□ -2.08
TTC9BQ8N6N2 RNU7-2P-201ENST00000516096 62 ntBASIC2.05□□□□□ -2.08
TTC9BQ8N6N2 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.05□□□□□ -2.08
TTC9BQ8N6N2 AL020996.3-201ENST00000606617 222 ntBASIC2.05□□□□□ -2.08
TTC9BQ8N6N2 AC243994.1-201ENST00000618627 109 ntBASIC2.05□□□□□ -2.08
TTC9BQ8N6N2 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
TTC9BQ8N6N2 RNU1-58P-201ENST00000362413 163 ntBASIC2.04□□□□□ -2.08
TTC9BQ8N6N2 RNU6-776P-201ENST00000364403 104 ntBASIC2.04□□□□□ -2.08
TTC9BQ8N6N2 SNORD115-27-201ENST00000364430 82 ntBASIC2.04□□□□□ -2.08
TTC9BQ8N6N2 RNU6-1022P-201ENST00000365049 104 ntBASIC2.04□□□□□ -2.08
TTC9BQ8N6N2 MIR583-201ENST00000384846 75 ntBASIC2.04□□□□□ -2.08
TTC9BQ8N6N2 MIR452-201ENST00000385020 85 ntBASIC2.04□□□□□ -2.08
TTC9BQ8N6N2 MIR136-201ENST00000385207 82 ntBASIC2.04□□□□□ -2.08
TTC9BQ8N6N2 AL442644.1-201ENST00000454390 3105 ntBASIC2.04□□□□□ -2.08
TTC9BQ8N6N2 RNA5SP137-201ENST00000516833 135 ntBASIC2.04□□□□□ -2.08
TTC9BQ8N6N2 SNORA31.25-201ENST00000517242 134 ntBASIC2.04□□□□□ -2.08
TTC9BQ8N6N2 DNAJC19P9-201ENST00000555084 351 ntBASIC2.04□□□□□ -2.08
TTC9BQ8N6N2 AC005786.1-201ENST00000588553 154 ntBASIC2.04□□□□□ -2.08
TTC9BQ8N6N2 AC105081.1-201ENST00000617727 106 ntBASIC2.04□□□□□ -2.08
TTC9BQ8N6N2 ZNF355P-201ENST00000427301 3216 ntBASIC2.04□□□□□ -2.08
TTC9BQ8N6N2 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.03□□□□□ -2.08
TTC9BQ8N6N2 Y_RNA.140-201ENST00000363474 103 ntBASIC2.03□□□□□ -2.08
TTC9BQ8N6N2 Y_RNA.316-201ENST00000365118 111 ntBASIC2.03□□□□□ -2.08
TTC9BQ8N6N2 Y_RNA.430-201ENST00000384081 110 ntBASIC2.03□□□□□ -2.08
TTC9BQ8N6N2 MIR526A1-201ENST00000384897 85 ntBASIC2.03□□□□□ -2.08
TTC9BQ8N6N2 SNORA26.9-201ENST00000391322 122 ntBASIC2.03□□□□□ -2.08
TTC9BQ8N6N2 AL445685.2-201ENST00000422551 342 ntBASIC2.03□□□□□ -2.08
TTC9BQ8N6N2 SNORD123-201ENST00000459473 70 ntBASIC2.03□□□□□ -2.08
TTC9BQ8N6N2 RNU6-1006P-201ENST00000516998 103 ntBASIC2.03□□□□□ -2.08
TTC9BQ8N6N2 RNU6-548P-201ENST00000517083 115 ntBASIC2.03□□□□□ -2.08
TTC9BQ8N6N2 Y_RNA.448-201ENST00000384185 108 ntBASIC2.02□□□□□ -2.09
TTC9BQ8N6N2 RNU6-1031P-201ENST00000384773 107 ntBASIC2.02□□□□□ -2.09
TTC9BQ8N6N2 RNU11-3P-201ENST00000391111 133 ntBASIC2.02□□□□□ -2.09
TTC9BQ8N6N2 SNORD67.1-201ENST00000516618 108 ntBASIC2.02□□□□□ -2.09
TTC9BQ8N6N2 MIR6840-201ENST00000611937 71 ntBASIC2.02□□□□□ -2.09
TTC9BQ8N6N2 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
TTC9BQ8N6N2 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
TTC9BQ8N6N2 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.01□□□□□ -2.09
TTC9BQ8N6N2 AC019129.1-201ENST00000403786 261 ntBASIC2.01□□□□□ -2.09
TTC9BQ8N6N2 RNA5SP261-201ENST00000410536 106 ntBASIC2.01□□□□□ -2.09
TTC9BQ8N6N2 Y_RNA.607-201ENST00000410597 98 ntBASIC2.01□□□□□ -2.09
TTC9BQ8N6N2 RNU1-98P-201ENST00000458992 160 ntBASIC2.01□□□□□ -2.09
TTC9BQ8N6N2 AC055731.1-201ENST00000474387 401 ntBASIC2.01□□□□□ -2.09
TTC9BQ8N6N2 AC079804.2-201ENST00000490376 200 ntBASIC2.01□□□□□ -2.09
TTC9BQ8N6N2 RNVU1-2-201ENST00000516326 135 ntBASIC2.01□□□□□ -2.09
TTC9BQ8N6N2 RNU2-19P-201ENST00000517288 84 ntBASIC2.01□□□□□ -2.09
TTC9BQ8N6N2 AC019288.1-201ENST00000557918 224 ntBASIC2.01□□□□□ -2.09
TTC9BQ8N6N2 AC020891.4-201ENST00000605745 93 ntBASIC2.01□□□□□ -2.09
TTC9BQ8N6N2 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
TTC9BQ8N6N2 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
TTC9BQ8N6N2 RNU6-633P-201ENST00000362612 103 ntBASIC2□□□□□ -2.09
TTC9BQ8N6N2 RNU6-1244P-201ENST00000363614 108 ntBASIC2□□□□□ -2.09
TTC9BQ8N6N2 SNORD38.1-201ENST00000363863 68 ntBASIC2□□□□□ -2.09
TTC9BQ8N6N2 RNU6-865P-201ENST00000364772 107 ntBASIC2□□□□□ -2.09
TTC9BQ8N6N2 MIR9-3-201ENST00000385084 90 ntBASIC2□□□□□ -2.09
TTC9BQ8N6N2 RNU6-482P-201ENST00000391068 107 ntBASIC2□□□□□ -2.09
TTC9BQ8N6N2 RNU2-7P-201ENST00000410794 178 ntBASIC2□□□□□ -2.09
TTC9BQ8N6N2 RNU6-1086P-201ENST00000410930 100 ntBASIC2□□□□□ -2.09
TTC9BQ8N6N2 RPL31P63-201ENST00000422565 375 ntBASIC2□□□□□ -2.09
TTC9BQ8N6N2 SPINT5P-201ENST00000448174 155 ntBASIC2□□□□□ -2.09
TTC9BQ8N6N2 AC025033.1-201ENST00000463883 194 ntBASIC2□□□□□ -2.09
TTC9BQ8N6N2 RPS29P11-201ENST00000496507 171 ntBASIC2□□□□□ -2.09
TTC9BQ8N6N2 RNA5SP437-201ENST00000517249 129 ntBASIC2□□□□□ -2.09
TTC9BQ8N6N2 MIR4287-201ENST00000579398 78 ntBASIC2□□□□□ -2.09
TTC9BQ8N6N2 MIR4439-201ENST00000583746 80 ntBASIC2□□□□□ -2.09
TTC9BQ8N6N2 AL353997.5-201ENST00000618886 171 ntBASIC2□□□□□ -2.09
TTC9BQ8N6N2 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2□□□□□ -2.09
TTC9BQ8N6N2 MIR4662A-201ENST00000637499 67 ntBASIC2□□□□□ -2.09
TTC9BQ8N6N2 RNU6-457P-201ENST00000363999 107 ntBASIC1.99□□□□□ -2.09
TTC9BQ8N6N2 SNORA24-201ENST00000384096 131 ntBASIC1.99□□□□□ -2.09
TTC9BQ8N6N2 RNU6-524P-201ENST00000384270 107 ntBASIC1.99□□□□□ -2.09
TTC9BQ8N6N2 Y_RNA.567-201ENST00000384736 106 ntBASIC1.99□□□□□ -2.09
TTC9BQ8N6N2 RNU6-1237P-201ENST00000384777 107 ntBASIC1.99□□□□□ -2.09
TTC9BQ8N6N2 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.99□□□□□ -2.09
TTC9BQ8N6N2 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
TTC9BQ8N6N2 HMGN2P39-201ENST00000398005 273 ntBASIC1.99□□□□□ -2.09
TTC9BQ8N6N2 RNA5SP338-201ENST00000410495 85 ntBASIC1.99□□□□□ -2.09
TTC9BQ8N6N2 RNA5SP247-201ENST00000411181 105 ntBASIC1.99□□□□□ -2.09
TTC9BQ8N6N2 AC073261.1-201ENST00000429409 121 ntBASIC1.99□□□□□ -2.09
TTC9BQ8N6N2 RNU7-73P-201ENST00000458743 63 ntBASIC1.99□□□□□ -2.09
TTC9BQ8N6N2 RNU6-717P-201ENST00000459076 104 ntBASIC1.99□□□□□ -2.09
TTC9BQ8N6N2 FAM106DP-201ENST00000586416 501 ntBASIC1.99□□□□□ -2.09
TTC9BQ8N6N2 AC021506.2-201ENST00000612354 169 ntBASIC1.99□□□□□ -2.09
TTC9BQ8N6N2 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
TTC9BQ8N6N2 AL596028.1-201ENST00000326971 197 ntBASIC1.98□□□□□ -2.09
TTC9BQ8N6N2 Y_RNA.94-201ENST00000363068 106 ntBASIC1.98□□□□□ -2.09
TTC9BQ8N6N2 MIR17-201ENST00000385012 84 ntBASIC1.98□□□□□ -2.09
TTC9BQ8N6N2 RNU6-1321P-201ENST00000390905 107 ntBASIC1.98□□□□□ -2.09
TTC9BQ8N6N2 MIR548G-201ENST00000408442 89 ntBASIC1.98□□□□□ -2.09
TTC9BQ8N6N2 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
TTC9BQ8N6N2 RNU1-17P-201ENST00000363022 152 ntBASIC1.97□□□□□ -2.09
TTC9BQ8N6N2 SNORA16B-201ENST00000364674 135 ntBASIC1.97□□□□□ -2.09
TTC9BQ8N6N2 RNA5SP138-201ENST00000365098 114 ntBASIC1.97□□□□□ -2.09
TTC9BQ8N6N2 RPL23AP6-201ENST00000446637 472 ntBASIC1.97□□□□□ -2.09
TTC9BQ8N6N2 RNA5SP182-201ENST00000516064 82 ntBASIC1.97□□□□□ -2.09
TTC9BQ8N6N2 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.97□□□□□ -2.09
TTC9BQ8N6N2 MIR8081-201ENST00000611533 95 ntBASIC1.97□□□□□ -2.09
TTC9BQ8N6N2 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 152.1 ms