Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 RNA5SP404-201ENST00000517118 132 ntBASIC1.16□□□□□ -2.22
VPS52Q8N1B4 RNU6-1223P-201ENST00000517124 104 ntBASIC1.16□□□□□ -2.22
VPS52Q8N1B4 MIR151B-201ENST00000584249 96 ntBASIC1.16□□□□□ -2.22
VPS52Q8N1B4 AC011603.4-201ENST00000611325 277 ntBASIC1.16□□□□□ -2.22
VPS52Q8N1B4 MIR6515-201ENST00000619843 57 ntBASIC1.16□□□□□ -2.22
VPS52Q8N1B4 AC021613.1-201ENST00000623880 111 ntBASIC1.16□□□□□ -2.22
VPS52Q8N1B4 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.16□□□□□ -2.22
VPS52Q8N1B4 Y_RNA.168-201ENST00000363740 102 ntBASIC1.15□□□□□ -2.23
VPS52Q8N1B4 Y_RNA.354-201ENST00000365448 111 ntBASIC1.15□□□□□ -2.23
VPS52Q8N1B4 Y_RNA.506-201ENST00000384494 102 ntBASIC1.15□□□□□ -2.23
VPS52Q8N1B4 SNORD38B-201ENST00000384690 67 ntBASIC1.15□□□□□ -2.23
VPS52Q8N1B4 MIR569-201ENST00000385228 96 ntBASIC1.15□□□□□ -2.23
VPS52Q8N1B4 MIR513C-201ENST00000401352 84 ntBASIC1.15□□□□□ -2.23
VPS52Q8N1B4 RPS3AP1-201ENST00000413190 320 ntBASIC1.15□□□□□ -2.23
VPS52Q8N1B4 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.15□□□□□ -2.23
VPS52Q8N1B4 AC036111.3-201ENST00000526389 112 ntBASIC1.15□□□□□ -2.23
VPS52Q8N1B4 SNORD38B-202ENST00000625943 69 ntBASIC1.15□□□□□ -2.23
VPS52Q8N1B4 AC008163.1-202ENST00000636004 2889 ntBASIC1.15□□□□□ -2.23
VPS52Q8N1B4 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.14□□□□□ -2.23
VPS52Q8N1B4 MRPL35P3-201ENST00000421557 364 ntBASIC1.14□□□□□ -2.23
VPS52Q8N1B4 RPS29P28-201ENST00000446439 141 ntBASIC1.14□□□□□ -2.23
VPS52Q8N1B4 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.14□□□□□ -2.23
VPS52Q8N1B4 MIR3152-201ENST00000579801 74 ntBASIC1.14□□□□□ -2.23
VPS52Q8N1B4 AC106800.4-201ENST00000614905 153 ntBASIC1.14□□□□□ -2.23
VPS52Q8N1B4 AP001340.1-201ENST00000624405 217 ntBASIC1.14□□□□□ -2.23
VPS52Q8N1B4 Y_RNA.330-201ENST00000365230 109 ntBASIC1.13□□□□□ -2.23
VPS52Q8N1B4 RNU6-1062P-201ENST00000383908 107 ntBASIC1.13□□□□□ -2.23
VPS52Q8N1B4 Y_RNA.540-201ENST00000384638 111 ntBASIC1.13□□□□□ -2.23
VPS52Q8N1B4 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.13□□□□□ -2.23
VPS52Q8N1B4 Y_RNA.651-201ENST00000459380 103 ntBASIC1.13□□□□□ -2.23
VPS52Q8N1B4 Y_RNA.686-201ENST00000516548 134 ntBASIC1.13□□□□□ -2.23
VPS52Q8N1B4 AP000753.3-201ENST00000604083 169 ntBASIC1.13□□□□□ -2.23
VPS52Q8N1B4 SNORD113.3-201ENST00000364630 78 ntBASIC1.12□□□□□ -2.23
VPS52Q8N1B4 SNORD18B-201ENST00000365659 72 ntBASIC1.12□□□□□ -2.23
VPS52Q8N1B4 MIR613-201ENST00000385248 95 ntBASIC1.12□□□□□ -2.23
VPS52Q8N1B4 RNU6-460P-201ENST00000391158 108 ntBASIC1.12□□□□□ -2.23
VPS52Q8N1B4 SNORD111-201ENST00000408139 94 ntBASIC1.12□□□□□ -2.23
VPS52Q8N1B4 UBL5P1-201ENST00000507979 193 ntBASIC1.12□□□□□ -2.23
VPS52Q8N1B4 SNORA25.12-201ENST00000516202 82 ntBASIC1.12□□□□□ -2.23
VPS52Q8N1B4 SNORD114-21-201ENST00000606412 72 ntBASIC1.12□□□□□ -2.23
VPS52Q8N1B4 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
VPS52Q8N1B4 SNORA22-201ENST00000383907 134 ntBASIC1.11□□□□□ -2.23
VPS52Q8N1B4 Y_RNA.488-201ENST00000384403 102 ntBASIC1.11□□□□□ -2.23
VPS52Q8N1B4 SNORA22C-201ENST00000384614 134 ntBASIC1.11□□□□□ -2.23
VPS52Q8N1B4 SNORA20-201ENST00000384662 132 ntBASIC1.11□□□□□ -2.23
VPS52Q8N1B4 RNA5SP95-201ENST00000410319 137 ntBASIC1.11□□□□□ -2.23
VPS52Q8N1B4 POLR2J4-204ENST00000418424 324 ntBASIC1.11□□□□□ -2.23
VPS52Q8N1B4 Y_RNA.690-201ENST00000516603 95 ntBASIC1.11□□□□□ -2.23
VPS52Q8N1B4 RNU6-309P-201ENST00000364573 106 ntBASIC1.1□□□□□ -2.23
VPS52Q8N1B4 RNU6-1187P-201ENST00000364771 110 ntBASIC1.1□□□□□ -2.23
VPS52Q8N1B4 RNA5SP144-201ENST00000410846 116 ntBASIC1.1□□□□□ -2.23
VPS52Q8N1B4 RNU6-893P-201ENST00000458841 100 ntBASIC1.1□□□□□ -2.23
VPS52Q8N1B4 MIR373-201ENST00000362273 69 ntBASIC1.09□□□□□ -2.23
VPS52Q8N1B4 SNORA22.1-201ENST00000362701 134 ntBASIC1.09□□□□□ -2.23
VPS52Q8N1B4 RNU6-508P-201ENST00000363231 103 ntBASIC1.09□□□□□ -2.23
VPS52Q8N1B4 RNU6-915P-201ENST00000364943 103 ntBASIC1.09□□□□□ -2.23
VPS52Q8N1B4 Y_RNA.420-201ENST00000384043 110 ntBASIC1.09□□□□□ -2.23
VPS52Q8N1B4 SNORA2B-201ENST00000384583 137 ntBASIC1.09□□□□□ -2.23
VPS52Q8N1B4 MIR200A-201ENST00000384875 90 ntBASIC1.09□□□□□ -2.23
VPS52Q8N1B4 MIR563-201ENST00000385080 79 ntBASIC1.09□□□□□ -2.23
VPS52Q8N1B4 RNU6-205P-201ENST00000390858 107 ntBASIC1.09□□□□□ -2.23
VPS52Q8N1B4 snoU13.2-201ENST00000459201 104 ntBASIC1.09□□□□□ -2.23
VPS52Q8N1B4 AC023827.1-201ENST00000569247 97 ntBASIC1.09□□□□□ -2.23
VPS52Q8N1B4 MIR3121-201ENST00000579680 77 ntBASIC1.09□□□□□ -2.23
VPS52Q8N1B4 MIR4661-201ENST00000582720 75 ntBASIC1.09□□□□□ -2.23
VPS52Q8N1B4 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.09□□□□□ -2.23
VPS52Q8N1B4 MIR6740-201ENST00000618268 113 ntBASIC1.09□□□□□ -2.23
VPS52Q8N1B4 RNU4-16P-201ENST00000364737 141 ntBASIC1.08□□□□□ -2.24
VPS52Q8N1B4 MIR7-2-201ENST00000384970 110 ntBASIC1.08□□□□□ -2.24
VPS52Q8N1B4 RNU6-426P-201ENST00000516464 97 ntBASIC1.08□□□□□ -2.24
VPS52Q8N1B4 RNA5SP480-201ENST00000516840 109 ntBASIC1.08□□□□□ -2.24
VPS52Q8N1B4 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.08□□□□□ -2.24
VPS52Q8N1B4 Y_RNA.757-201ENST00000578934 114 ntBASIC1.08□□□□□ -2.24
VPS52Q8N1B4 AC211469.2-201ENST00000605461 205 ntBASIC1.08□□□□□ -2.24
VPS52Q8N1B4 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
VPS52Q8N1B4 RNU4-38P-201ENST00000364472 129 ntBASIC1.07□□□□□ -2.24
VPS52Q8N1B4 Y_RNA.280-201ENST00000364765 112 ntBASIC1.07□□□□□ -2.24
VPS52Q8N1B4 RNU6-690P-201ENST00000365242 106 ntBASIC1.07□□□□□ -2.24
VPS52Q8N1B4 Y_RNA.568-201ENST00000384742 113 ntBASIC1.07□□□□□ -2.24
VPS52Q8N1B4 SNORD12C-201ENST00000386307 89 ntBASIC1.07□□□□□ -2.24
VPS52Q8N1B4 RNU7-62P-201ENST00000458856 62 ntBASIC1.07□□□□□ -2.24
VPS52Q8N1B4 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.07□□□□□ -2.24
VPS52Q8N1B4 AP001328.1-201ENST00000528550 176 ntBASIC1.07□□□□□ -2.24
VPS52Q8N1B4 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.07□□□□□ -2.24
VPS52Q8N1B4 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.07□□□□□ -2.24
VPS52Q8N1B4 PVT1_3.1-201ENST00000620853 95 ntBASIC1.07□□□□□ -2.24
VPS52Q8N1B4 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.06□□□□□ -2.24
VPS52Q8N1B4 SNORD124-201ENST00000459577 104 ntBASIC1.06□□□□□ -2.24
VPS52Q8N1B4 RNU6-240P-201ENST00000516098 97 ntBASIC1.06□□□□□ -2.24
VPS52Q8N1B4 RNU6-346P-201ENST00000516288 111 ntBASIC1.06□□□□□ -2.24
VPS52Q8N1B4 Y_RNA.692-201ENST00000516627 105 ntBASIC1.06□□□□□ -2.24
VPS52Q8N1B4 RNU6-1258P-201ENST00000516911 111 ntBASIC1.06□□□□□ -2.24
VPS52Q8N1B4 AC103810.9-201ENST00000606688 112 ntBASIC1.06□□□□□ -2.24
VPS52Q8N1B4 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.06□□□□□ -2.24
VPS52Q8N1B4 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
VPS52Q8N1B4 AC010332.2-201ENST00000613083 1904 ntBASIC1.05□□□□□ -2.24
VPS52Q8N1B4 SNORD115-2-201ENST00000362842 82 ntBASIC1.05□□□□□ -2.24
VPS52Q8N1B4 SNORD115-20-201ENST00000365099 82 ntBASIC1.05□□□□□ -2.24
VPS52Q8N1B4 Y_RNA.343-201ENST00000365354 112 ntBASIC1.05□□□□□ -2.24
VPS52Q8N1B4 RNU6-746P-201ENST00000384112 109 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 169.9 ms