Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 MIR216A-201ENST00000385063 110 ntBASIC1□□□□□ -2.25
DHX40Q8IX18 RNU6-602P-201ENST00000411155 105 ntBASIC1□□□□□ -2.25
DHX40Q8IX18 AC244023.1-201ENST00000426884 112 ntBASIC1□□□□□ -2.25
DHX40Q8IX18 HMGN1P33-201ENST00000432945 451 ntBASIC1□□□□□ -2.25
DHX40Q8IX18 SNORD124-201ENST00000459577 104 ntBASIC1□□□□□ -2.25
DHX40Q8IX18 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1□□□□□ -2.25
DHX40Q8IX18 AC242498.1-201ENST00000604134 111 ntBASIC1□□□□□ -2.25
DHX40Q8IX18 Y_RNA.270-201ENST00000364693 104 ntBASIC0.99□□□□□ -2.25
DHX40Q8IX18 RNU6-1187P-201ENST00000364771 110 ntBASIC0.99□□□□□ -2.25
DHX40Q8IX18 RNU6-1336P-201ENST00000383886 109 ntBASIC0.99□□□□□ -2.25
DHX40Q8IX18 RNU6-1190P-201ENST00000410811 104 ntBASIC0.99□□□□□ -2.25
DHX40Q8IX18 POLR2J4-204ENST00000418424 324 ntBASIC0.99□□□□□ -2.25
DHX40Q8IX18 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.99□□□□□ -2.25
DHX40Q8IX18 MIR373-201ENST00000362273 69 ntBASIC0.98□□□□□ -2.25
DHX40Q8IX18 SNORA20-201ENST00000384662 132 ntBASIC0.98□□□□□ -2.25
DHX40Q8IX18 Y_RNA.580-201ENST00000391004 95 ntBASIC0.98□□□□□ -2.25
DHX40Q8IX18 SNORD37.2-201ENST00000391075 66 ntBASIC0.98□□□□□ -2.25
DHX40Q8IX18 MIR942-201ENST00000401111 86 ntBASIC0.98□□□□□ -2.25
DHX40Q8IX18 RNA5SP95-201ENST00000410319 137 ntBASIC0.98□□□□□ -2.25
DHX40Q8IX18 MTATP6P21-201ENST00000440681 189 ntBASIC0.98□□□□□ -2.25
DHX40Q8IX18 AC067940.1-201ENST00000458411 300 ntBASIC0.98□□□□□ -2.25
DHX40Q8IX18 RNU6-893P-201ENST00000458841 100 ntBASIC0.98□□□□□ -2.25
DHX40Q8IX18 AC074198.2-201ENST00000508153 258 ntBASIC0.98□□□□□ -2.25
DHX40Q8IX18 CYP3A137P-201ENST00000562436 69 ntBASIC0.98□□□□□ -2.25
DHX40Q8IX18 MIR6857-201ENST00000613267 93 ntBASIC0.98□□□□□ -2.25
DHX40Q8IX18 Y_RNA.374-201ENST00000365606 101 ntBASIC0.97□□□□□ -2.25
DHX40Q8IX18 RNU6-886P-201ENST00000384319 105 ntBASIC0.97□□□□□ -2.25
DHX40Q8IX18 Y_RNA.497-201ENST00000384447 98 ntBASIC0.97□□□□□ -2.25
DHX40Q8IX18 RNU6-205P-201ENST00000390858 107 ntBASIC0.97□□□□□ -2.25
DHX40Q8IX18 RNU6-588P-201ENST00000410281 105 ntBASIC0.97□□□□□ -2.25
DHX40Q8IX18 RNU6-994P-201ENST00000410507 111 ntBASIC0.97□□□□□ -2.25
DHX40Q8IX18 RNU6-394P-201ENST00000410735 107 ntBASIC0.97□□□□□ -2.25
DHX40Q8IX18 RNA5SP236-201ENST00000516169 116 ntBASIC0.97□□□□□ -2.25
DHX40Q8IX18 AC021613.1-201ENST00000623880 111 ntBASIC0.97□□□□□ -2.25
DHX40Q8IX18 RNY1P6-201ENST00000384193 109 ntBASIC0.96□□□□□ -2.26
DHX40Q8IX18 Y_RNA.555-201ENST00000384673 110 ntBASIC0.96□□□□□ -2.26
DHX40Q8IX18 PCNPP3-201ENST00000393579 471 ntBASIC0.96□□□□□ -2.26
DHX40Q8IX18 RNU7-62P-201ENST00000458856 62 ntBASIC0.96□□□□□ -2.26
DHX40Q8IX18 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.96□□□□□ -2.26
DHX40Q8IX18 MIR3973-201ENST00000579824 107 ntBASIC0.96□□□□□ -2.26
DHX40Q8IX18 FAM71BP1-201ENST00000604431 523 ntBASIC0.96□□□□□ -2.26
DHX40Q8IX18 RNU6-94P-201ENST00000607728 107 ntBASIC0.96□□□□□ -2.26
DHX40Q8IX18 AC011603.4-201ENST00000611325 277 ntBASIC0.96□□□□□ -2.26
DHX40Q8IX18 MIR3658-201ENST00000636291 56 ntBASIC0.96□□□□□ -2.26
DHX40Q8IX18 MIR6841-201ENST00000637129 72 ntBASIC0.96□□□□□ -2.26
DHX40Q8IX18 RNU6-449P-201ENST00000383914 107 ntBASIC0.95□□□□□ -2.26
DHX40Q8IX18 MIR532-201ENST00000385025 91 ntBASIC0.95□□□□□ -2.26
DHX40Q8IX18 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
DHX40Q8IX18 snoU13.2-201ENST00000459201 104 ntBASIC0.95□□□□□ -2.26
DHX40Q8IX18 U7.7-201ENST00000459276 60 ntBASIC0.95□□□□□ -2.26
DHX40Q8IX18 RNU7-45P-201ENST00000459460 63 ntBASIC0.95□□□□□ -2.26
DHX40Q8IX18 PDCD5P2-201ENST00000507570 312 ntBASIC0.95□□□□□ -2.26
DHX40Q8IX18 RNU6-1110P-201ENST00000516462 101 ntBASIC0.95□□□□□ -2.26
DHX40Q8IX18 AL136317.1-201ENST00000612653 226 ntBASIC0.95□□□□□ -2.26
DHX40Q8IX18 Y_RNA.584-201ENST00000391090 114 ntBASIC0.94□□□□□ -2.26
DHX40Q8IX18 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.94□□□□□ -2.26
DHX40Q8IX18 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.94□□□□□ -2.26
DHX40Q8IX18 RNU6-351P-201ENST00000516097 100 ntBASIC0.94□□□□□ -2.26
DHX40Q8IX18 RNA5SP255-201ENST00000516370 107 ntBASIC0.94□□□□□ -2.26
DHX40Q8IX18 MIR4698-201ENST00000577795 80 ntBASIC0.94□□□□□ -2.26
DHX40Q8IX18 MIR3668-201ENST00000582138 75 ntBASIC0.94□□□□□ -2.26
DHX40Q8IX18 MIR6740-201ENST00000618268 113 ntBASIC0.94□□□□□ -2.26
DHX40Q8IX18 Y_RNA.778-201ENST00000620203 90 ntBASIC0.94□□□□□ -2.26
DHX40Q8IX18 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
DHX40Q8IX18 Y_RNA.120-201ENST00000363304 110 ntBASIC0.93□□□□□ -2.26
DHX40Q8IX18 Y_RNA.150-201ENST00000363562 102 ntBASIC0.93□□□□□ -2.26
DHX40Q8IX18 SNORD114-2-201ENST00000363953 78 ntBASIC0.93□□□□□ -2.26
DHX40Q8IX18 RNU1-36P-201ENST00000365130 165 ntBASIC0.93□□□□□ -2.26
DHX40Q8IX18 MIR588-201ENST00000384900 83 ntBASIC0.93□□□□□ -2.26
DHX40Q8IX18 MIR563-201ENST00000385080 79 ntBASIC0.93□□□□□ -2.26
DHX40Q8IX18 MIR1827-201ENST00000408549 66 ntBASIC0.93□□□□□ -2.26
DHX40Q8IX18 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.93□□□□□ -2.26
DHX40Q8IX18 MIR18B-201ENST00000454574 71 ntBASIC0.93□□□□□ -2.26
DHX40Q8IX18 AC112693.2-201ENST00000556538 232 ntBASIC0.93□□□□□ -2.26
DHX40Q8IX18 RNU6-349P-201ENST00000362402 107 ntBASIC0.92□□□□□ -2.26
DHX40Q8IX18 SNORA22.1-201ENST00000362701 134 ntBASIC0.92□□□□□ -2.26
DHX40Q8IX18 Y_RNA.251-201ENST00000364551 99 ntBASIC0.92□□□□□ -2.26
DHX40Q8IX18 SNORD18B-201ENST00000365659 72 ntBASIC0.92□□□□□ -2.26
DHX40Q8IX18 SNORD12C-201ENST00000386307 89 ntBASIC0.92□□□□□ -2.26
DHX40Q8IX18 RNU6-1165P-201ENST00000410119 107 ntBASIC0.92□□□□□ -2.26
DHX40Q8IX18 AC025627.3-201ENST00000582078 182 ntBASIC0.92□□□□□ -2.26
DHX40Q8IX18 MIR1-1-201ENST00000362147 71 ntBASIC0.91□□□□□ -2.26
DHX40Q8IX18 Y_RNA.180-201ENST00000363867 113 ntBASIC0.91□□□□□ -2.26
DHX40Q8IX18 RNU6-934P-201ENST00000365154 107 ntBASIC0.91□□□□□ -2.26
DHX40Q8IX18 RNU4-11P-201ENST00000365287 132 ntBASIC0.91□□□□□ -2.26
DHX40Q8IX18 MT-TF-201ENST00000387314 71 ntBASIC0.91□□□□□ -2.26
DHX40Q8IX18 MIR3144-201ENST00000579460 79 ntBASIC0.91□□□□□ -2.26
DHX40Q8IX18 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.91□□□□□ -2.26
DHX40Q8IX18 AC104465.1-201ENST00000611365 139 ntBASIC0.91□□□□□ -2.26
DHX40Q8IX18 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.91□□□□□ -2.26
DHX40Q8IX18 RNU6-151P-201ENST00000364158 107 ntBASIC0.9□□□□□ -2.27
DHX40Q8IX18 SNORD116-18-201ENST00000383961 92 ntBASIC0.9□□□□□ -2.27
DHX40Q8IX18 Y_RNA.464-201ENST00000384282 110 ntBASIC0.9□□□□□ -2.27
DHX40Q8IX18 AL603914.1-201ENST00000401964 204 ntBASIC0.9□□□□□ -2.27
DHX40Q8IX18 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.9□□□□□ -2.27
DHX40Q8IX18 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.9□□□□□ -2.27
DHX40Q8IX18 RPS26P5-201ENST00000418544 335 ntBASIC0.9□□□□□ -2.27
DHX40Q8IX18 RPL39P28-201ENST00000465655 155 ntBASIC0.9□□□□□ -2.27
DHX40Q8IX18 RNU2-60P-201ENST00000517290 128 ntBASIC0.9□□□□□ -2.27
DHX40Q8IX18 RNU6-1130P-201ENST00000365434 107 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 188.4 ms