Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 MIR514B-201ENST00000516774 80 ntBASIC1.83□□□□□ -2.12
TRIM48Q8IWZ4 PRELID3BP2-201ENST00000605362 201 ntBASIC1.83□□□□□ -2.12
TRIM48Q8IWZ4 GHRLOS.1-201ENST00000610995 70 ntBASIC1.83□□□□□ -2.12
TRIM48Q8IWZ4 MIR6845-201ENST00000613182 61 ntBASIC1.83□□□□□ -2.12
TRIM48Q8IWZ4 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
TRIM48Q8IWZ4 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.83□□□□□ -2.12
TRIM48Q8IWZ4 WWP1P1-201ENST00000466609 2769 ntBASIC1.82□□□□□ -2.12
TRIM48Q8IWZ4 RNU4-67P-201ENST00000364569 141 ntBASIC1.82□□□□□ -2.12
TRIM48Q8IWZ4 Y_RNA.507-201ENST00000384500 99 ntBASIC1.82□□□□□ -2.12
TRIM48Q8IWZ4 SNORD38B-201ENST00000384690 67 ntBASIC1.82□□□□□ -2.12
TRIM48Q8IWZ4 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
TRIM48Q8IWZ4 SNORA26.9-201ENST00000391322 122 ntBASIC1.82□□□□□ -2.12
TRIM48Q8IWZ4 MIR1912-201ENST00000410389 80 ntBASIC1.82□□□□□ -2.12
TRIM48Q8IWZ4 AL356379.1-201ENST00000414105 126 ntBASIC1.82□□□□□ -2.12
TRIM48Q8IWZ4 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
TRIM48Q8IWZ4 SNORD38B-202ENST00000625943 69 ntBASIC1.82□□□□□ -2.12
TRIM48Q8IWZ4 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
TRIM48Q8IWZ4 RNU6-363P-201ENST00000362895 105 ntBASIC1.81□□□□□ -2.12
TRIM48Q8IWZ4 SNORD1A-201ENST00000364968 72 ntBASIC1.81□□□□□ -2.12
TRIM48Q8IWZ4 Y_RNA.354-201ENST00000365448 111 ntBASIC1.81□□□□□ -2.12
TRIM48Q8IWZ4 RNU6-409P-201ENST00000384114 104 ntBASIC1.81□□□□□ -2.12
TRIM48Q8IWZ4 RNU6-1113P-201ENST00000384348 107 ntBASIC1.81□□□□□ -2.12
TRIM48Q8IWZ4 RNY4P30-201ENST00000410216 95 ntBASIC1.81□□□□□ -2.12
TRIM48Q8IWZ4 AC003989.2-201ENST00000440224 169 ntBASIC1.81□□□□□ -2.12
TRIM48Q8IWZ4 RNU6-521P-201ENST00000516663 105 ntBASIC1.81□□□□□ -2.12
TRIM48Q8IWZ4 AL627230.6-201ENST00000611129 280 ntBASIC1.81□□□□□ -2.12
TRIM48Q8IWZ4 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
TRIM48Q8IWZ4 AL359851.1-201ENST00000569460 4997 ntBASIC1.8□□□□□ -2.12
TRIM48Q8IWZ4 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.8□□□□□ -2.12
TRIM48Q8IWZ4 MIR302D-201ENST00000362275 68 ntBASIC1.8□□□□□ -2.12
TRIM48Q8IWZ4 Y_RNA.348-201ENST00000365403 103 ntBASIC1.8□□□□□ -2.12
TRIM48Q8IWZ4 MIR30A-201ENST00000385092 71 ntBASIC1.8□□□□□ -2.12
TRIM48Q8IWZ4 MIR764-201ENST00000390811 85 ntBASIC1.8□□□□□ -2.12
TRIM48Q8IWZ4 RNU6-733P-201ENST00000410759 104 ntBASIC1.8□□□□□ -2.12
TRIM48Q8IWZ4 RNU6-1086P-201ENST00000410930 100 ntBASIC1.8□□□□□ -2.12
TRIM48Q8IWZ4 RNA5SP489-201ENST00000410986 109 ntBASIC1.8□□□□□ -2.12
TRIM48Q8IWZ4 AL353813.1-201ENST00000440700 253 ntBASIC1.8□□□□□ -2.12
TRIM48Q8IWZ4 RNU6-250P-201ENST00000516958 103 ntBASIC1.8□□□□□ -2.12
TRIM48Q8IWZ4 AC015712.3-201ENST00000559380 164 ntBASIC1.8□□□□□ -2.12
TRIM48Q8IWZ4 AP000942.3-201ENST00000603702 160 ntBASIC1.8□□□□□ -2.12
TRIM48Q8IWZ4 AL357312.1-201ENST00000603879 298 ntBASIC1.8□□□□□ -2.12
TRIM48Q8IWZ4 AC012493.3-201ENST00000604494 112 ntBASIC1.8□□□□□ -2.12
TRIM48Q8IWZ4 AP001318.4-201ENST00000616637 121 ntBASIC1.8□□□□□ -2.12
TRIM48Q8IWZ4 RNA5SP48-201ENST00000363969 126 ntBASIC1.79□□□□□ -2.12
TRIM48Q8IWZ4 RNU6-905P-201ENST00000384434 107 ntBASIC1.79□□□□□ -2.12
TRIM48Q8IWZ4 RNU6-679P-201ENST00000391003 106 ntBASIC1.79□□□□□ -2.12
TRIM48Q8IWZ4 MIR1302-7-201ENST00000408841 72 ntBASIC1.79□□□□□ -2.12
TRIM48Q8IWZ4 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.79□□□□□ -2.12
TRIM48Q8IWZ4 AC244023.1-201ENST00000426884 112 ntBASIC1.79□□□□□ -2.12
TRIM48Q8IWZ4 AC079140.2-201ENST00000506193 142 ntBASIC1.79□□□□□ -2.12
TRIM48Q8IWZ4 RNU6-904P-201ENST00000516206 101 ntBASIC1.79□□□□□ -2.12
TRIM48Q8IWZ4 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.79□□□□□ -2.12
TRIM48Q8IWZ4 AC242498.1-201ENST00000604134 111 ntBASIC1.79□□□□□ -2.12
TRIM48Q8IWZ4 FAM71BP1-201ENST00000604431 523 ntBASIC1.79□□□□□ -2.12
TRIM48Q8IWZ4 RNU6-1255P-201ENST00000363434 112 ntBASIC1.78□□□□□ -2.12
TRIM48Q8IWZ4 Y_RNA.360-201ENST00000365512 102 ntBASIC1.78□□□□□ -2.12
TRIM48Q8IWZ4 RNU7-79P-201ENST00000516082 62 ntBASIC1.78□□□□□ -2.12
TRIM48Q8IWZ4 DEFB131E-201ENST00000532329 154 ntBASIC1.78□□□□□ -2.12
TRIM48Q8IWZ4 AC084768.2-201ENST00000622736 221 ntBASIC1.78□□□□□ -2.12
TRIM48Q8IWZ4 RNU6-1099P-201ENST00000363533 107 ntBASIC1.77□□□□□ -2.13
TRIM48Q8IWZ4 RNU6-640P-201ENST00000363693 105 ntBASIC1.77□□□□□ -2.13
TRIM48Q8IWZ4 SNORA16.1-201ENST00000364597 132 ntBASIC1.77□□□□□ -2.13
TRIM48Q8IWZ4 MIR577-201ENST00000385196 96 ntBASIC1.77□□□□□ -2.13
TRIM48Q8IWZ4 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.77□□□□□ -2.13
TRIM48Q8IWZ4 RPL39P39-201ENST00000455840 151 ntBASIC1.77□□□□□ -2.13
TRIM48Q8IWZ4 RNU7-35P-201ENST00000517174 62 ntBASIC1.77□□□□□ -2.13
TRIM48Q8IWZ4 MIR3937-201ENST00000580135 106 ntBASIC1.77□□□□□ -2.13
TRIM48Q8IWZ4 MIR4769-201ENST00000584126 77 ntBASIC1.77□□□□□ -2.13
TRIM48Q8IWZ4 AL353997.5-201ENST00000618886 171 ntBASIC1.77□□□□□ -2.13
TRIM48Q8IWZ4 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
TRIM48Q8IWZ4 AL161722.3-201ENST00000605789 2983 ntBASIC1.77□□□□□ -2.13
TRIM48Q8IWZ4 Y_RNA.43-201ENST00000362670 111 ntBASIC1.76□□□□□ -2.13
TRIM48Q8IWZ4 RNY3P2-201ENST00000362918 102 ntBASIC1.76□□□□□ -2.13
TRIM48Q8IWZ4 RNU6-1307P-201ENST00000391012 103 ntBASIC1.76□□□□□ -2.13
TRIM48Q8IWZ4 SNORA25.15-201ENST00000516487 89 ntBASIC1.76□□□□□ -2.13
TRIM48Q8IWZ4 SNORD67.1-201ENST00000516618 108 ntBASIC1.76□□□□□ -2.13
TRIM48Q8IWZ4 SNORA44.1-201ENST00000517031 108 ntBASIC1.76□□□□□ -2.13
TRIM48Q8IWZ4 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.76□□□□□ -2.13
TRIM48Q8IWZ4 MIR5582-201ENST00000579697 68 ntBASIC1.76□□□□□ -2.13
TRIM48Q8IWZ4 AC105081.1-201ENST00000617727 106 ntBASIC1.76□□□□□ -2.13
TRIM48Q8IWZ4 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.76□□□□□ -2.13
TRIM48Q8IWZ4 AL512310.12-203ENST00000640543 90 ntBASIC1.76□□□□□ -2.13
TRIM48Q8IWZ4 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
TRIM48Q8IWZ4 Y_RNA.78-201ENST00000362970 110 ntBASIC1.75□□□□□ -2.13
TRIM48Q8IWZ4 RNU4-36P-201ENST00000364294 144 ntBASIC1.75□□□□□ -2.13
TRIM48Q8IWZ4 SNORD115-35-201ENST00000365122 82 ntBASIC1.75□□□□□ -2.13
TRIM48Q8IWZ4 Y_RNA.544-201ENST00000384650 113 ntBASIC1.75□□□□□ -2.13
TRIM48Q8IWZ4 MIR9-3-201ENST00000385084 90 ntBASIC1.75□□□□□ -2.13
TRIM48Q8IWZ4 RNU7-2P-201ENST00000516096 62 ntBASIC1.75□□□□□ -2.13
TRIM48Q8IWZ4 SNORA40.13-201ENST00000516379 120 ntBASIC1.75□□□□□ -2.13
TRIM48Q8IWZ4 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.75□□□□□ -2.13
TRIM48Q8IWZ4 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
TRIM48Q8IWZ4 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
TRIM48Q8IWZ4 RNU6-832P-201ENST00000363319 107 ntBASIC1.74□□□□□ -2.13
TRIM48Q8IWZ4 RNU6-396P-201ENST00000365369 105 ntBASIC1.74□□□□□ -2.13
TRIM48Q8IWZ4 MIR206-201ENST00000384872 86 ntBASIC1.74□□□□□ -2.13
TRIM48Q8IWZ4 RNU6-205P-201ENST00000390858 107 ntBASIC1.74□□□□□ -2.13
TRIM48Q8IWZ4 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.74□□□□□ -2.13
TRIM48Q8IWZ4 RNA5SP237-201ENST00000410414 113 ntBASIC1.74□□□□□ -2.13
TRIM48Q8IWZ4 AC027119.1-201ENST00000440877 241 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 164.3 ms