Protein–RNA interactions for Protein: Q8IWL2

SFTPA1, Pulmonary surfactant-associated protein A1, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1Q8IWL2 RNU6-165P-201ENST00000517170 99 ntBASIC1.44□□□□□ -2.18
SFTPA1Q8IWL2 MIR3152-201ENST00000579801 74 ntBASIC1.44□□□□□ -2.18
SFTPA1Q8IWL2 MIR4422-201ENST00000581938 83 ntBASIC1.44□□□□□ -2.18
SFTPA1Q8IWL2 MIR8055-201ENST00000610739 97 ntBASIC1.44□□□□□ -2.18
SFTPA1Q8IWL2 AL121890.5-201ENST00000620848 304 ntBASIC1.44□□□□□ -2.18
SFTPA1Q8IWL2 U6.95-201ENST00000636931 70 ntBASIC1.44□□□□□ -2.18
SFTPA1Q8IWL2 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.43□□□□□ -2.18
SFTPA1Q8IWL2 Y_RNA.171-201ENST00000363760 102 ntBASIC1.43□□□□□ -2.18
SFTPA1Q8IWL2 Y_RNA.298-201ENST00000364960 107 ntBASIC1.43□□□□□ -2.18
SFTPA1Q8IWL2 RNU6-1056P-201ENST00000383996 107 ntBASIC1.43□□□□□ -2.18
SFTPA1Q8IWL2 RNU6-44P-201ENST00000384045 107 ntBASIC1.43□□□□□ -2.18
SFTPA1Q8IWL2 MIR548A3-201ENST00000385297 97 ntBASIC1.43□□□□□ -2.18
SFTPA1Q8IWL2 MIR320A-201ENST00000385302 82 ntBASIC1.43□□□□□ -2.18
SFTPA1Q8IWL2 MIR934-201ENST00000401241 83 ntBASIC1.43□□□□□ -2.18
SFTPA1Q8IWL2 RNA5SP261-201ENST00000410536 106 ntBASIC1.43□□□□□ -2.18
SFTPA1Q8IWL2 POLR2J4-204ENST00000418424 324 ntBASIC1.43□□□□□ -2.18
SFTPA1Q8IWL2 AL353770.2-201ENST00000620024 78 ntBASIC1.43□□□□□ -2.18
SFTPA1Q8IWL2 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.43□□□□□ -2.18
SFTPA1Q8IWL2 SNORA22.1-201ENST00000362701 134 ntBASIC1.42□□□□□ -2.18
SFTPA1Q8IWL2 AL022718.1-201ENST00000412004 84 ntBASIC1.42□□□□□ -2.18
SFTPA1Q8IWL2 AL512326.2-201ENST00000426359 151 ntBASIC1.42□□□□□ -2.18
SFTPA1Q8IWL2 Y_RNA.649-201ENST00000459077 103 ntBASIC1.42□□□□□ -2.18
SFTPA1Q8IWL2 RN7SKP88-201ENST00000516847 250 ntBASIC1.42□□□□□ -2.18
SFTPA1Q8IWL2 RNU6-1258P-201ENST00000516911 111 ntBASIC1.42□□□□□ -2.18
SFTPA1Q8IWL2 CYP3A52P-201ENST00000563326 91 ntBASIC1.42□□□□□ -2.18
SFTPA1Q8IWL2 AL670379.3-201ENST00000605040 251 ntBASIC1.42□□□□□ -2.18
SFTPA1Q8IWL2 7SK.8-201ENST00000612110 250 ntBASIC1.42□□□□□ -2.18
SFTPA1Q8IWL2 7SK.11-201ENST00000615477 250 ntBASIC1.42□□□□□ -2.18
SFTPA1Q8IWL2 7SK.13-201ENST00000622040 250 ntBASIC1.42□□□□□ -2.18
SFTPA1Q8IWL2 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.42□□□□□ -2.18
SFTPA1Q8IWL2 Y_RNA.35-201ENST00000362601 101 ntBASIC1.41□□□□□ -2.18
SFTPA1Q8IWL2 SNORA63.4-201ENST00000362763 126 ntBASIC1.41□□□□□ -2.18
SFTPA1Q8IWL2 Y_RNA.346-201ENST00000365385 112 ntBASIC1.41□□□□□ -2.18
SFTPA1Q8IWL2 Y_RNA.355-201ENST00000365462 98 ntBASIC1.41□□□□□ -2.18
SFTPA1Q8IWL2 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.41□□□□□ -2.18
SFTPA1Q8IWL2 RPS3AP1-201ENST00000413190 320 ntBASIC1.41□□□□□ -2.18
SFTPA1Q8IWL2 AC245517.4-201ENST00000448601 281 ntBASIC1.41□□□□□ -2.18
SFTPA1Q8IWL2 AC004223.1-201ENST00000479840 271 ntBASIC1.41□□□□□ -2.18
SFTPA1Q8IWL2 RNU6-902P-201ENST00000517212 91 ntBASIC1.41□□□□□ -2.18
SFTPA1Q8IWL2 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.41□□□□□ -2.18
SFTPA1Q8IWL2 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.41□□□□□ -2.18
SFTPA1Q8IWL2 Z97988.1-201ENST00000637697 135 ntBASIC1.41□□□□□ -2.18
SFTPA1Q8IWL2 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.41□□□□□ -2.18
SFTPA1Q8IWL2 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.4□□□□□ -2.18
SFTPA1Q8IWL2 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
SFTPA1Q8IWL2 MIR1302-7-201ENST00000408841 72 ntBASIC1.4□□□□□ -2.19
SFTPA1Q8IWL2 RNA5SP136-201ENST00000410906 107 ntBASIC1.4□□□□□ -2.19
SFTPA1Q8IWL2 RNU6-602P-201ENST00000411155 105 ntBASIC1.4□□□□□ -2.19
SFTPA1Q8IWL2 AL035461.1-201ENST00000421490 332 ntBASIC1.4□□□□□ -2.19
SFTPA1Q8IWL2 RNU7-113P-201ENST00000459273 62 ntBASIC1.4□□□□□ -2.19
SFTPA1Q8IWL2 AC023790.1-201ENST00000482174 347 ntBASIC1.4□□□□□ -2.19
SFTPA1Q8IWL2 AL133373.1-201ENST00000497098 94 ntBASIC1.4□□□□□ -2.19
SFTPA1Q8IWL2 RNA5SP102-201ENST00000516865 106 ntBASIC1.4□□□□□ -2.19
SFTPA1Q8IWL2 MIR4285-201ENST00000581001 85 ntBASIC1.4□□□□□ -2.19
SFTPA1Q8IWL2 PRELID3BP2-201ENST00000605362 201 ntBASIC1.4□□□□□ -2.19
SFTPA1Q8IWL2 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.4□□□□□ -2.19
SFTPA1Q8IWL2 MIR103A2-201ENST00000362154 78 ntBASIC1.39□□□□□ -2.19
SFTPA1Q8IWL2 Y_RNA.81-201ENST00000362997 102 ntBASIC1.39□□□□□ -2.19
SFTPA1Q8IWL2 SNORD116-21-201ENST00000384507 92 ntBASIC1.39□□□□□ -2.19
SFTPA1Q8IWL2 Y_RNA.549-201ENST00000384657 102 ntBASIC1.39□□□□□ -2.19
SFTPA1Q8IWL2 RPL31P63-201ENST00000422565 375 ntBASIC1.39□□□□□ -2.19
SFTPA1Q8IWL2 AC245047.7-201ENST00000440265 293 ntBASIC1.39□□□□□ -2.19
SFTPA1Q8IWL2 RNU1-123P-201ENST00000458950 160 ntBASIC1.39□□□□□ -2.19
SFTPA1Q8IWL2 AC048334.1-201ENST00000477975 159 ntBASIC1.39□□□□□ -2.19
SFTPA1Q8IWL2 COX6CP6-201ENST00000490840 228 ntBASIC1.39□□□□□ -2.19
SFTPA1Q8IWL2 AC004812.1-201ENST00000540773 146 ntBASIC1.39□□□□□ -2.19
SFTPA1Q8IWL2 AL035470.1-201ENST00000622571 220 ntBASIC1.39□□□□□ -2.19
SFTPA1Q8IWL2 MIR6841-201ENST00000637129 72 ntBASIC1.39□□□□□ -2.19
SFTPA1Q8IWL2 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.39□□□□□ -2.19
SFTPA1Q8IWL2 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.38□□□□□ -2.19
SFTPA1Q8IWL2 MIR96-201ENST00000362288 78 ntBASIC1.38□□□□□ -2.19
SFTPA1Q8IWL2 RNU6-834P-201ENST00000362367 110 ntBASIC1.38□□□□□ -2.19
SFTPA1Q8IWL2 RNA5SP264-201ENST00000363115 107 ntBASIC1.38□□□□□ -2.19
SFTPA1Q8IWL2 Y_RNA.118-201ENST00000363300 101 ntBASIC1.38□□□□□ -2.19
SFTPA1Q8IWL2 Y_RNA.508-201ENST00000384502 114 ntBASIC1.38□□□□□ -2.19
SFTPA1Q8IWL2 SNORD38B-201ENST00000384690 67 ntBASIC1.38□□□□□ -2.19
SFTPA1Q8IWL2 RNY4P18-201ENST00000391107 89 ntBASIC1.38□□□□□ -2.19
SFTPA1Q8IWL2 RNA5SP61-201ENST00000516453 100 ntBASIC1.38□□□□□ -2.19
SFTPA1Q8IWL2 RNU6-589P-201ENST00000516485 107 ntBASIC1.38□□□□□ -2.19
SFTPA1Q8IWL2 RNU6-919P-201ENST00000516731 104 ntBASIC1.38□□□□□ -2.19
SFTPA1Q8IWL2 SNORD38B-202ENST00000625943 69 ntBASIC1.38□□□□□ -2.19
SFTPA1Q8IWL2 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
SFTPA1Q8IWL2 Y_RNA.224-201ENST00000364308 111 ntBASIC1.37□□□□□ -2.19
SFTPA1Q8IWL2 Y_RNA.430-201ENST00000384081 110 ntBASIC1.37□□□□□ -2.19
SFTPA1Q8IWL2 Y_RNA.470-201ENST00000384307 117 ntBASIC1.37□□□□□ -2.19
SFTPA1Q8IWL2 Y_RNA.531-201ENST00000384589 121 ntBASIC1.37□□□□□ -2.19
SFTPA1Q8IWL2 MIR1185-1-201ENST00000408598 86 ntBASIC1.37□□□□□ -2.19
SFTPA1Q8IWL2 RNU6-893P-201ENST00000458841 100 ntBASIC1.37□□□□□ -2.19
SFTPA1Q8IWL2 SNORA31.2-201ENST00000516019 134 ntBASIC1.37□□□□□ -2.19
SFTPA1Q8IWL2 Y_RNA.709-201ENST00000516952 92 ntBASIC1.37□□□□□ -2.19
SFTPA1Q8IWL2 MIR8065-201ENST00000620577 100 ntBASIC1.37□□□□□ -2.19
SFTPA1Q8IWL2 Y_RNA.198-201ENST00000364013 98 ntBASIC1.36□□□□□ -2.19
SFTPA1Q8IWL2 SNORD12C-201ENST00000386307 89 ntBASIC1.36□□□□□ -2.19
SFTPA1Q8IWL2 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.36□□□□□ -2.19
SFTPA1Q8IWL2 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.36□□□□□ -2.19
SFTPA1Q8IWL2 RNA5SP33-201ENST00000516687 98 ntBASIC1.36□□□□□ -2.19
SFTPA1Q8IWL2 AP003716.2-201ENST00000528260 108 ntBASIC1.36□□□□□ -2.19
SFTPA1Q8IWL2 AC007012.1-201ENST00000567192 175 ntBASIC1.36□□□□□ -2.19
SFTPA1Q8IWL2 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.36□□□□□ -2.19
SFTPA1Q8IWL2 Y_RNA.213-201ENST00000364178 111 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 261.1 ms