Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 RNA5SP268-201ENST00000516828 124 ntBASIC0.05□□□□□ -2.4
CDKL3Q8IVW4 MIR3152-201ENST00000579801 74 ntBASIC0.05□□□□□ -2.4
CDKL3Q8IVW4 MIR4680-201ENST00000580906 66 ntBASIC0.05□□□□□ -2.4
CDKL3Q8IVW4 MIR3129-201ENST00000581095 76 ntBASIC0.05□□□□□ -2.4
CDKL3Q8IVW4 MIR5197-201ENST00000583721 112 ntBASIC0.05□□□□□ -2.4
CDKL3Q8IVW4 MIR6082-201ENST00000613604 109 ntBASIC0.05□□□□□ -2.4
CDKL3Q8IVW4 AC091932.4-201ENST00000623386 200 ntBASIC0.05□□□□□ -2.4
CDKL3Q8IVW4 AL596211.1-201ENST00000569873 2277 ntBASIC0.04□□□□□ -2.4
CDKL3Q8IVW4 Y_RNA.138-201ENST00000363462 102 ntBASIC0.04□□□□□ -2.4
CDKL3Q8IVW4 SNORA42.1-201ENST00000363515 137 ntBASIC0.04□□□□□ -2.4
CDKL3Q8IVW4 RNU6-1099P-201ENST00000363533 107 ntBASIC0.04□□□□□ -2.4
CDKL3Q8IVW4 Y_RNA.153-201ENST00000363615 91 ntBASIC0.04□□□□□ -2.4
CDKL3Q8IVW4 Y_RNA.430-201ENST00000384081 110 ntBASIC0.04□□□□□ -2.4
CDKL3Q8IVW4 Y_RNA.454-201ENST00000384224 113 ntBASIC0.04□□□□□ -2.4
CDKL3Q8IVW4 Y_RNA.542-201ENST00000384641 111 ntBASIC0.04□□□□□ -2.4
CDKL3Q8IVW4 MIR548P-201ENST00000408336 84 ntBASIC0.04□□□□□ -2.4
CDKL3Q8IVW4 SNORA31.14-201ENST00000516728 116 ntBASIC0.04□□□□□ -2.4
CDKL3Q8IVW4 RNU6-570P-201ENST00000517051 105 ntBASIC0.04□□□□□ -2.4
CDKL3Q8IVW4 MIR4768-201ENST00000585270 74 ntBASIC0.04□□□□□ -2.4
CDKL3Q8IVW4 AL442067.1-201ENST00000613261 223 ntBASIC0.04□□□□□ -2.4
CDKL3Q8IVW4 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.03□□□□□ -2.4
CDKL3Q8IVW4 Y_RNA.216-201ENST00000364205 93 ntBASIC0.03□□□□□ -2.4
CDKL3Q8IVW4 SNORD114-9-201ENST00000364370 72 ntBASIC0.03□□□□□ -2.4
CDKL3Q8IVW4 Y_RNA.618-201ENST00000410949 107 ntBASIC0.03□□□□□ -2.4
CDKL3Q8IVW4 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.03□□□□□ -2.4
CDKL3Q8IVW4 AC141846.1-201ENST00000568348 142 ntBASIC0.03□□□□□ -2.4
CDKL3Q8IVW4 RNU1-29P-201ENST00000606574 126 ntBASIC0.03□□□□□ -2.4
CDKL3Q8IVW4 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.03□□□□□ -2.4
CDKL3Q8IVW4 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
CDKL3Q8IVW4 SNORA2A-201ENST00000383885 135 ntBASIC0.02□□□□□ -2.41
CDKL3Q8IVW4 SNORA72.6-201ENST00000384520 129 ntBASIC0.02□□□□□ -2.41
CDKL3Q8IVW4 SNORA20-201ENST00000384662 132 ntBASIC0.02□□□□□ -2.41
CDKL3Q8IVW4 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.02□□□□□ -2.41
CDKL3Q8IVW4 PCNPP3-201ENST00000393579 471 ntBASIC0.02□□□□□ -2.41
CDKL3Q8IVW4 MIR548H2-201ENST00000408874 88 ntBASIC0.02□□□□□ -2.41
CDKL3Q8IVW4 SUMO1P3-201ENST00000439961 304 ntBASIC0.02□□□□□ -2.41
CDKL3Q8IVW4 SNORD2.1-201ENST00000458762 69 ntBASIC0.02□□□□□ -2.41
CDKL3Q8IVW4 RNU6-765P-201ENST00000516916 99 ntBASIC0.02□□□□□ -2.41
CDKL3Q8IVW4 MIR4491-201ENST00000581087 68 ntBASIC0.02□□□□□ -2.41
CDKL3Q8IVW4 MIR3171-201ENST00000584270 74 ntBASIC0.02□□□□□ -2.41
CDKL3Q8IVW4 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.02□□□□□ -2.41
CDKL3Q8IVW4 MIR6828-201ENST00000636181 60 ntBASIC0.02□□□□□ -2.41
CDKL3Q8IVW4 Y_RNA.174-201ENST00000363781 105 ntBASIC0.01□□□□□ -2.41
CDKL3Q8IVW4 RNU6-1292P-201ENST00000383856 107 ntBASIC0.01□□□□□ -2.41
CDKL3Q8IVW4 Y_RNA.433-201ENST00000384089 102 ntBASIC0.01□□□□□ -2.41
CDKL3Q8IVW4 SEPT7P4-201ENST00000437076 306 ntBASIC0.01□□□□□ -2.41
CDKL3Q8IVW4 RNU6-561P-201ENST00000516222 102 ntBASIC0.01□□□□□ -2.41
CDKL3Q8IVW4 RNU6-1232P-201ENST00000516299 86 ntBASIC0.01□□□□□ -2.41
CDKL3Q8IVW4 RNA5SP285-201ENST00000516619 119 ntBASIC0.01□□□□□ -2.41
CDKL3Q8IVW4 RNU6-1137P-201ENST00000517073 99 ntBASIC0.01□□□□□ -2.41
CDKL3Q8IVW4 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC0.01□□□□□ -2.41
CDKL3Q8IVW4 MTND5P34-201ENST00000568888 325 ntBASIC0.01□□□□□ -2.41
CDKL3Q8IVW4 MIR6841-201ENST00000637129 72 ntBASIC0.01□□□□□ -2.41
CDKL3Q8IVW4 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0□□□□□ -2.41
CDKL3Q8IVW4 SNORA22.1-201ENST00000362701 134 ntBASIC0□□□□□ -2.41
CDKL3Q8IVW4 Y_RNA.82-201ENST00000363000 102 ntBASIC0□□□□□ -2.41
CDKL3Q8IVW4 Y_RNA.92-201ENST00000363043 102 ntBASIC0□□□□□ -2.41
CDKL3Q8IVW4 RNA5SP214-201ENST00000363378 118 ntBASIC0□□□□□ -2.41
CDKL3Q8IVW4 Y_RNA.176-201ENST00000363815 109 ntBASIC0□□□□□ -2.41
CDKL3Q8IVW4 RNU6-1229P-201ENST00000364295 107 ntBASIC0□□□□□ -2.41
CDKL3Q8IVW4 Y_RNA.235-201ENST00000364412 102 ntBASIC0□□□□□ -2.41
CDKL3Q8IVW4 Y_RNA.237-201ENST00000364439 102 ntBASIC0□□□□□ -2.41
CDKL3Q8IVW4 Y_RNA.306-201ENST00000365015 102 ntBASIC0□□□□□ -2.41
CDKL3Q8IVW4 Y_RNA.312-201ENST00000365089 102 ntBASIC0□□□□□ -2.41
CDKL3Q8IVW4 Y_RNA.322-201ENST00000365151 102 ntBASIC0□□□□□ -2.41
CDKL3Q8IVW4 SNORA79-201ENST00000408376 140 ntBASIC0□□□□□ -2.41
CDKL3Q8IVW4 Y_RNA.650-201ENST00000459002 102 ntBASIC0□□□□□ -2.41
CDKL3Q8IVW4 RNA5SP227-201ENST00000516184 113 ntBASIC0□□□□□ -2.41
CDKL3Q8IVW4 RNU6-135P-201ENST00000516769 101 ntBASIC0□□□□□ -2.41
CDKL3Q8IVW4 RNU7-70P-201ENST00000516941 66 ntBASIC0□□□□□ -2.41
CDKL3Q8IVW4 Y_RNA.777-201ENST00000516982 102 ntBASIC0□□□□□ -2.41
CDKL3Q8IVW4 SCARNA16.5-201ENST00000517114 183 ntBASIC0□□□□□ -2.41
CDKL3Q8IVW4 MIR4667-201ENST00000578933 66 ntBASIC0□□□□□ -2.41
CDKL3Q8IVW4 Y_RNA.771-201ENST00000598668 102 ntBASIC0□□□□□ -2.41
CDKL3Q8IVW4 AC104408.1-201ENST00000605241 170 ntBASIC0□□□□□ -2.41
CDKL3Q8IVW4 U2.14-201ENST00000615943 113 ntBASIC0□□□□□ -2.41
CDKL3Q8IVW4 Y_RNA.789-201ENST00000622480 102 ntBASIC0□□□□□ -2.41
CDKL3Q8IVW4 SNORA9.1-201ENST00000362412 131 ntBASIC-0.01□□□□□ -2.41
CDKL3Q8IVW4 RNU6-728P-201ENST00000365375 104 ntBASIC-0.01□□□□□ -2.41
CDKL3Q8IVW4 RNU6-949P-201ENST00000384040 107 ntBASIC-0.01□□□□□ -2.41
CDKL3Q8IVW4 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.01□□□□□ -2.41
CDKL3Q8IVW4 Y_RNA.535-201ENST00000384612 99 ntBASIC-0.01□□□□□ -2.41
CDKL3Q8IVW4 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.01□□□□□ -2.41
CDKL3Q8IVW4 RNU6-291P-201ENST00000384720 107 ntBASIC-0.01□□□□□ -2.41
CDKL3Q8IVW4 MIR329-2-201ENST00000385029 84 ntBASIC-0.01□□□□□ -2.41
CDKL3Q8IVW4 RNU6-381P-201ENST00000391259 108 ntBASIC-0.01□□□□□ -2.41
CDKL3Q8IVW4 Y_RNA.590-201ENST00000410140 107 ntBASIC-0.01□□□□□ -2.41
CDKL3Q8IVW4 MTND4LP11-201ENST00000422184 280 ntBASIC-0.01□□□□□ -2.41
CDKL3Q8IVW4 TRBVB-201ENST00000477100 408 ntBASIC-0.01□□□□□ -2.41
CDKL3Q8IVW4 Y_RNA.679-201ENST00000516416 91 ntBASIC-0.01□□□□□ -2.41
CDKL3Q8IVW4 RNA5SP47-201ENST00000517230 109 ntBASIC-0.01□□□□□ -2.41
CDKL3Q8IVW4 AC020661.2-201ENST00000560114 134 ntBASIC-0.01□□□□□ -2.41
CDKL3Q8IVW4 AL365205.2-201ENST00000594586 68 ntBASIC-0.01□□□□□ -2.41
CDKL3Q8IVW4 AL365265.1-201ENST00000621045 234 ntBASIC-0.01□□□□□ -2.41
CDKL3Q8IVW4 AC021613.1-201ENST00000623880 111 ntBASIC-0.01□□□□□ -2.41
CDKL3Q8IVW4 MIR411-201ENST00000362239 96 ntBASIC-0.02□□□□□ -2.41
CDKL3Q8IVW4 SNORA18-201ENST00000384416 132 ntBASIC-0.02□□□□□ -2.41
CDKL3Q8IVW4 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.02□□□□□ -2.41
CDKL3Q8IVW4 RNU6-535P-201ENST00000384722 107 ntBASIC-0.02□□□□□ -2.41
CDKL3Q8IVW4 AC108059.2-201ENST00000434626 151 ntBASIC-0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 148.1 ms