Protein–RNA interactions for Protein: Q86WB0

ZC3HC1, Nuclear-interacting partner of ALK, humanhuman

Known RBP Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1Q86WB0 AC106800.4-201ENST00000614905 153 ntBASIC1.04□□□□□ -2.24
ZC3HC1Q86WB0 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.04□□□□□ -2.24
ZC3HC1Q86WB0 MIR6740-201ENST00000618268 113 ntBASIC1.04□□□□□ -2.24
ZC3HC1Q86WB0 MIR378A-201ENST00000362177 66 ntBASIC1.03□□□□□ -2.24
ZC3HC1Q86WB0 SNORA2B-201ENST00000384583 137 ntBASIC1.03□□□□□ -2.24
ZC3HC1Q86WB0 Y_RNA.586-201ENST00000391146 98 ntBASIC1.03□□□□□ -2.24
ZC3HC1Q86WB0 RNU6-893P-201ENST00000458841 100 ntBASIC1.03□□□□□ -2.24
ZC3HC1Q86WB0 RNU2-35P-201ENST00000516446 142 ntBASIC1.03□□□□□ -2.24
ZC3HC1Q86WB0 AC021443.1-201ENST00000604478 211 ntBASIC1.03□□□□□ -2.24
ZC3HC1Q86WB0 uc_338.6-201ENST00000613544 171 ntBASIC1.03□□□□□ -2.24
ZC3HC1Q86WB0 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.03□□□□□ -2.25
ZC3HC1Q86WB0 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
ZC3HC1Q86WB0 RNU6-704P-201ENST00000364162 103 ntBASIC1.02□□□□□ -2.25
ZC3HC1Q86WB0 SNORA22-201ENST00000383907 134 ntBASIC1.02□□□□□ -2.25
ZC3HC1Q86WB0 SNORA22C-201ENST00000384614 134 ntBASIC1.02□□□□□ -2.25
ZC3HC1Q86WB0 MIR588-201ENST00000384900 83 ntBASIC1.02□□□□□ -2.25
ZC3HC1Q86WB0 SNORD111-201ENST00000408139 94 ntBASIC1.02□□□□□ -2.25
ZC3HC1Q86WB0 AL512326.2-201ENST00000426359 151 ntBASIC1.02□□□□□ -2.25
ZC3HC1Q86WB0 RNU7-62P-201ENST00000458856 62 ntBASIC1.02□□□□□ -2.25
ZC3HC1Q86WB0 IGKV1-22-201ENST00000524313 326 ntBASIC1.02□□□□□ -2.25
ZC3HC1Q86WB0 MIR4781-201ENST00000585250 76 ntBASIC1.02□□□□□ -2.25
ZC3HC1Q86WB0 AC103810.9-201ENST00000606688 112 ntBASIC1.02□□□□□ -2.25
ZC3HC1Q86WB0 AL137067.1-201ENST00000615933 120 ntBASIC1.02□□□□□ -2.25
ZC3HC1Q86WB0 TUG1_4.1-201ENST00000619464 181 ntBASIC1.02□□□□□ -2.25
ZC3HC1Q86WB0 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.01□□□□□ -2.25
ZC3HC1Q86WB0 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.01□□□□□ -2.25
ZC3HC1Q86WB0 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
ZC3HC1Q86WB0 MIR563-201ENST00000385080 79 ntBASIC1.01□□□□□ -2.25
ZC3HC1Q86WB0 AL022718.1-201ENST00000412004 84 ntBASIC1.01□□□□□ -2.25
ZC3HC1Q86WB0 AL158147.1-201ENST00000443970 75 ntBASIC1.01□□□□□ -2.25
ZC3HC1Q86WB0 snoU13.21-201ENST00000459368 105 ntBASIC1.01□□□□□ -2.25
ZC3HC1Q86WB0 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.01□□□□□ -2.25
ZC3HC1Q86WB0 RNU6-94P-201ENST00000607728 107 ntBASIC1.01□□□□□ -2.25
ZC3HC1Q86WB0 MIR6078-201ENST00000611069 100 ntBASIC1.01□□□□□ -2.25
ZC3HC1Q86WB0 SNORD115-2-201ENST00000362842 82 ntBASIC1□□□□□ -2.25
ZC3HC1Q86WB0 SNORD115-20-201ENST00000365099 82 ntBASIC1□□□□□ -2.25
ZC3HC1Q86WB0 Y_RNA.470-201ENST00000384307 117 ntBASIC1□□□□□ -2.25
ZC3HC1Q86WB0 AL603908.1-201ENST00000406098 201 ntBASIC1□□□□□ -2.25
ZC3HC1Q86WB0 RNU7-164P-201ENST00000459221 62 ntBASIC1□□□□□ -2.25
ZC3HC1Q86WB0 SNORD124-201ENST00000459577 104 ntBASIC1□□□□□ -2.25
ZC3HC1Q86WB0 AC113410.1-201ENST00000505029 247 ntBASIC1□□□□□ -2.25
ZC3HC1Q86WB0 AC004812.1-201ENST00000540773 146 ntBASIC1□□□□□ -2.25
ZC3HC1Q86WB0 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1□□□□□ -2.25
ZC3HC1Q86WB0 AC012676.2-201ENST00000619258 186 ntBASIC1□□□□□ -2.25
ZC3HC1Q86WB0 AC091895.1-201ENST00000624494 256 ntBASIC1□□□□□ -2.25
ZC3HC1Q86WB0 RNU6-647P-201ENST00000364243 107 ntBASIC0.99□□□□□ -2.25
ZC3HC1Q86WB0 RNU4-38P-201ENST00000364472 129 ntBASIC0.99□□□□□ -2.25
ZC3HC1Q86WB0 Y_RNA.298-201ENST00000364960 107 ntBASIC0.99□□□□□ -2.25
ZC3HC1Q86WB0 RNU6-342P-201ENST00000384521 104 ntBASIC0.99□□□□□ -2.25
ZC3HC1Q86WB0 Y_RNA.531-201ENST00000384589 121 ntBASIC0.99□□□□□ -2.25
ZC3HC1Q86WB0 RNU6-482P-201ENST00000391068 107 ntBASIC0.99□□□□□ -2.25
ZC3HC1Q86WB0 RNU6-1165P-201ENST00000410119 107 ntBASIC0.99□□□□□ -2.25
ZC3HC1Q86WB0 RNU7-113P-201ENST00000459273 62 ntBASIC0.99□□□□□ -2.25
ZC3HC1Q86WB0 OR2A41P-201ENST00000473586 105 ntBASIC0.99□□□□□ -2.25
ZC3HC1Q86WB0 RNU7-123P-201ENST00000515911 60 ntBASIC0.99□□□□□ -2.25
ZC3HC1Q86WB0 RN7SKP19-201ENST00000516016 252 ntBASIC0.99□□□□□ -2.25
ZC3HC1Q86WB0 AL391516.1-201ENST00000554380 2449 ntBASIC0.98□□□□□ -2.25
ZC3HC1Q86WB0 MIR30D-201ENST00000362283 70 ntBASIC0.98□□□□□ -2.25
ZC3HC1Q86WB0 RNU6-235P-201ENST00000362644 107 ntBASIC0.98□□□□□ -2.25
ZC3HC1Q86WB0 Y_RNA.140-201ENST00000363474 103 ntBASIC0.98□□□□□ -2.25
ZC3HC1Q86WB0 RNU6-1237P-201ENST00000384777 107 ntBASIC0.98□□□□□ -2.25
ZC3HC1Q86WB0 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.98□□□□□ -2.25
ZC3HC1Q86WB0 Y_RNA.617-201ENST00000410920 90 ntBASIC0.98□□□□□ -2.25
ZC3HC1Q86WB0 RNU6-1211P-201ENST00000459179 105 ntBASIC0.98□□□□□ -2.25
ZC3HC1Q86WB0 AC087343.1-201ENST00000477341 475 ntBASIC0.98□□□□□ -2.25
ZC3HC1Q86WB0 RNY4P20-201ENST00000516678 93 ntBASIC0.98□□□□□ -2.25
ZC3HC1Q86WB0 RNU6-971P-201ENST00000516920 106 ntBASIC0.98□□□□□ -2.25
ZC3HC1Q86WB0 MIR4524B-201ENST00000581569 115 ntBASIC0.98□□□□□ -2.25
ZC3HC1Q86WB0 SNORA18-201ENST00000384416 132 ntBASIC0.97□□□□□ -2.25
ZC3HC1Q86WB0 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.97□□□□□ -2.25
ZC3HC1Q86WB0 RNU6-369P-201ENST00000362515 102 ntBASIC0.96□□□□□ -2.26
ZC3HC1Q86WB0 RNU6-53P-201ENST00000365367 106 ntBASIC0.96□□□□□ -2.26
ZC3HC1Q86WB0 MIR539-201ENST00000365690 78 ntBASIC0.96□□□□□ -2.26
ZC3HC1Q86WB0 RNU6-1104P-201ENST00000384723 104 ntBASIC0.96□□□□□ -2.26
ZC3HC1Q86WB0 MIR200A-201ENST00000384875 90 ntBASIC0.96□□□□□ -2.26
ZC3HC1Q86WB0 SNORD83.1-201ENST00000411362 77 ntBASIC0.96□□□□□ -2.26
ZC3HC1Q86WB0 RNU6-781P-201ENST00000516377 101 ntBASIC0.96□□□□□ -2.26
ZC3HC1Q86WB0 RNA5SP33-201ENST00000516687 98 ntBASIC0.96□□□□□ -2.26
ZC3HC1Q86WB0 AC022523.2-201ENST00000561045 150 ntBASIC0.96□□□□□ -2.26
ZC3HC1Q86WB0 AL662814.1-201ENST00000617364 121 ntBASIC0.96□□□□□ -2.26
ZC3HC1Q86WB0 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
ZC3HC1Q86WB0 SNORD114-24-201ENST00000365029 72 ntBASIC0.95□□□□□ -2.26
ZC3HC1Q86WB0 RNU6-934P-201ENST00000365154 107 ntBASIC0.95□□□□□ -2.26
ZC3HC1Q86WB0 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.95□□□□□ -2.26
ZC3HC1Q86WB0 RNA5SP237-201ENST00000410414 113 ntBASIC0.95□□□□□ -2.26
ZC3HC1Q86WB0 MIR18B-201ENST00000454574 71 ntBASIC0.95□□□□□ -2.26
ZC3HC1Q86WB0 UBL5P1-201ENST00000507979 193 ntBASIC0.95□□□□□ -2.26
ZC3HC1Q86WB0 AC141846.1-201ENST00000568348 142 ntBASIC0.95□□□□□ -2.26
ZC3HC1Q86WB0 MIR548AE2-201ENST00000583456 67 ntBASIC0.95□□□□□ -2.26
ZC3HC1Q86WB0 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
ZC3HC1Q86WB0 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.94□□□□□ -2.26
ZC3HC1Q86WB0 RNU6-994P-201ENST00000410507 111 ntBASIC0.94□□□□□ -2.26
ZC3HC1Q86WB0 AC015818.7-201ENST00000428754 109 ntBASIC0.94□□□□□ -2.26
ZC3HC1Q86WB0 AC087499.7-201ENST00000441958 109 ntBASIC0.94□□□□□ -2.26
ZC3HC1Q86WB0 RNU7-35P-201ENST00000517174 62 ntBASIC0.94□□□□□ -2.26
ZC3HC1Q86WB0 MIR4661-201ENST00000582720 75 ntBASIC0.94□□□□□ -2.26
ZC3HC1Q86WB0 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
ZC3HC1Q86WB0 RNU6-1187P-201ENST00000364771 110 ntBASIC0.93□□□□□ -2.26
ZC3HC1Q86WB0 MT-TF-201ENST00000387314 71 ntBASIC0.93□□□□□ -2.26
ZC3HC1Q86WB0 MT-TI-201ENST00000387365 69 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms