Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 RNU7-154P-201ENST00000516194 62 ntBASIC-2.63□□□□□ -2.83
VPS13CQ709C8 SCARNA24.2-201ENST00000516968 130 ntBASIC-2.63□□□□□ -2.83
VPS13CQ709C8 AC138915.2-201ENST00000569776 97 ntBASIC-2.63□□□□□ -2.83
VPS13CQ709C8 TPTEP1-208ENST00000636884 213 ntBASIC-2.63□□□□□ -2.83
VPS13CQ709C8 RNU6-647P-201ENST00000364243 107 ntBASIC-2.64□□□□□ -2.83
VPS13CQ709C8 TPTE2P1-204ENST00000435256 593 ntBASIC-2.64□□□□□ -2.83
VPS13CQ709C8 SNORD116-30-201ENST00000516468 85 ntBASIC-2.64□□□□□ -2.83
VPS13CQ709C8 RNU1-54P-201ENST00000517181 120 ntBASIC-2.64□□□□□ -2.83
VPS13CQ709C8 U6.97-201ENST00000636904 101 ntBASIC-2.64□□□□□ -2.83
VPS13CQ709C8 Y_RNA.344-201ENST00000365381 112 ntBASIC-2.64□□□□□ -2.83
VPS13CQ709C8 AC114982.2-201ENST00000461396 358 ntBASIC-2.64□□□□□ -2.83
VPS13CQ709C8 SNORD114-10-201ENST00000363409 72 ntBASIC-2.65□□□□□ -2.83
VPS13CQ709C8 RNU6-853P-201ENST00000364306 107 ntBASIC-2.65□□□□□ -2.83
VPS13CQ709C8 RNU7-88P-201ENST00000458752 63 ntBASIC-2.65□□□□□ -2.83
VPS13CQ709C8 RNU6-1281P-201ENST00000516223 105 ntBASIC-2.65□□□□□ -2.83
VPS13CQ709C8 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-2.65□□□□□ -2.83
VPS13CQ709C8 SNORD113-3-201ENST00000364830 72 ntBASIC-2.65□□□□□ -2.83
VPS13CQ709C8 Y_RNA.629-201ENST00000411368 105 ntBASIC-2.65□□□□□ -2.83
VPS13CQ709C8 AC133794.1-201ENST00000602731 914 ntBASIC-2.65□□□□□ -2.83
VPS13CQ709C8 Y_RNA.188-201ENST00000363952 111 ntBASIC-2.66□□□□□ -2.83
VPS13CQ709C8 RNU6-946P-201ENST00000383878 107 ntBASIC-2.66□□□□□ -2.83
VPS13CQ709C8 MIR519A2-201ENST00000384990 87 ntBASIC-2.66□□□□□ -2.83
VPS13CQ709C8 AC004467.1-201ENST00000615678 330 ntBASIC-2.66□□□□□ -2.83
VPS13CQ709C8 RNU6-524P-201ENST00000384270 107 ntBASIC-2.66□□□□□ -2.84
VPS13CQ709C8 SNORA20-201ENST00000384662 132 ntBASIC-2.66□□□□□ -2.84
VPS13CQ709C8 RNU7-195P-201ENST00000458793 62 ntBASIC-2.66□□□□□ -2.84
VPS13CQ709C8 Y_RNA.690-201ENST00000516603 95 ntBASIC-2.66□□□□□ -2.84
VPS13CQ709C8 RNU6-1012P-201ENST00000516606 109 ntBASIC-2.66□□□□□ -2.84
VPS13CQ709C8 5S_rRNA.13-201ENST00000622298 123 ntBASIC-2.66□□□□□ -2.84
VPS13CQ709C8 SNORD114-7-201ENST00000362520 77 ntBASIC-2.66□□□□□ -2.84
VPS13CQ709C8 RNU6-280P-201ENST00000364145 104 ntBASIC-2.66□□□□□ -2.84
VPS13CQ709C8 RNU6-1215P-201ENST00000384441 102 ntBASIC-2.66□□□□□ -2.84
VPS13CQ709C8 MIR217-201ENST00000384817 110 ntBASIC-2.66□□□□□ -2.84
VPS13CQ709C8 DLGAP5P1-201ENST00000430307 464 ntBASIC-2.66□□□□□ -2.84
VPS13CQ709C8 AC013734.1-201ENST00000619329 111 ntBASIC-2.66□□□□□ -2.84
VPS13CQ709C8 Y_RNA.351-201ENST00000365436 96 ntBASIC-2.67□□□□□ -2.84
VPS13CQ709C8 RNU7-35P-201ENST00000517174 62 ntBASIC-2.67□□□□□ -2.84
VPS13CQ709C8 AC144568.1-201ENST00000520139 137 ntBASIC-2.67□□□□□ -2.84
VPS13CQ709C8 SCOCP1-201ENST00000554676 349 ntBASIC-2.67□□□□□ -2.84
VPS13CQ709C8 RNU6-1214P-201ENST00000363650 109 ntBASIC-2.67□□□□□ -2.84
VPS13CQ709C8 RNU6-1203P-201ENST00000410703 110 ntBASIC-2.67□□□□□ -2.84
VPS13CQ709C8 AC008507.4-201ENST00000585464 127 ntBASIC-2.67□□□□□ -2.84
VPS13CQ709C8 RNY1P16-201ENST00000363063 111 ntBASIC-2.67□□□□□ -2.84
VPS13CQ709C8 RNU6-682P-201ENST00000363843 106 ntBASIC-2.67□□□□□ -2.84
VPS13CQ709C8 RNU6-1014P-201ENST00000383940 103 ntBASIC-2.67□□□□□ -2.84
VPS13CQ709C8 RNU6-1052P-201ENST00000411398 104 ntBASIC-2.67□□□□□ -2.84
VPS13CQ709C8 RNU6-719P-201ENST00000516671 104 ntBASIC-2.67□□□□□ -2.84
VPS13CQ709C8 MIR3941-201ENST00000582572 103 ntBASIC-2.67□□□□□ -2.84
VPS13CQ709C8 U6.115-201ENST00000636045 103 ntBASIC-2.67□□□□□ -2.84
VPS13CQ709C8 MIRLET7A2-201ENST00000362105 72 ntBASIC-2.68□□□□□ -2.84
VPS13CQ709C8 MIR520D-201ENST00000385002 87 ntBASIC-2.68□□□□□ -2.84
VPS13CQ709C8 Y_RNA.158-201ENST00000363651 101 ntBASIC-2.68□□□□□ -2.84
VPS13CQ709C8 RNY1P1-201ENST00000364372 112 ntBASIC-2.68□□□□□ -2.84
VPS13CQ709C8 AL009048.1-201ENST00000450437 298 ntBASIC-2.69□□□□□ -2.84
VPS13CQ709C8 RNU6-559P-201ENST00000516151 98 ntBASIC-2.69□□□□□ -2.84
VPS13CQ709C8 AC091144.1-201ENST00000519573 138 ntBASIC-2.69□□□□□ -2.84
VPS13CQ709C8 MIR4500-201ENST00000579472 76 ntBASIC-2.69□□□□□ -2.84
VPS13CQ709C8 AC005520.4-201ENST00000604337 90 ntBASIC-2.69□□□□□ -2.84
VPS13CQ709C8 AC245884.10-201ENST00000597355 337 ntBASIC-2.69□□□□□ -2.84
VPS13CQ709C8 AC084781.2-201ENST00000615568 161 ntBASIC-2.69□□□□□ -2.84
VPS13CQ709C8 Y_RNA.207-201ENST00000364142 106 ntBASIC-2.69□□□□□ -2.84
VPS13CQ709C8 Y_RNA.409-201ENST00000383990 98 ntBASIC-2.69□□□□□ -2.84
VPS13CQ709C8 SNORD116-9-201ENST00000384000 95 ntBASIC-2.69□□□□□ -2.84
VPS13CQ709C8 RNY4P13-201ENST00000384284 96 ntBASIC-2.69□□□□□ -2.84
VPS13CQ709C8 SNORD116-3-201ENST00000384287 95 ntBASIC-2.69□□□□□ -2.84
VPS13CQ709C8 SNORD116-8-201ENST00000384365 95 ntBASIC-2.69□□□□□ -2.84
VPS13CQ709C8 SNORD116-7-201ENST00000384404 95 ntBASIC-2.69□□□□□ -2.84
VPS13CQ709C8 SNORD116-5-201ENST00000384462 95 ntBASIC-2.69□□□□□ -2.84
VPS13CQ709C8 SNORA53-201ENST00000391141 249 ntBASIC-2.69□□□□□ -2.84
VPS13CQ709C8 AC104996.3-201ENST00000590718 94 ntBASIC-2.69□□□□□ -2.84
VPS13CQ709C8 Y_RNA.241-201ENST00000364470 117 ntBASIC-2.7□□□□□ -2.84
VPS13CQ709C8 Y_RNA.242-201ENST00000364473 110 ntBASIC-2.7□□□□□ -2.84
VPS13CQ709C8 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC-2.7□□□□□ -2.84
VPS13CQ709C8 AC026741.1-201ENST00000605892 482 ntBASIC-2.7□□□□□ -2.84
VPS13CQ709C8 AL158063.1-201ENST00000615349 536 ntBASIC-2.7□□□□□ -2.84
VPS13CQ709C8 RNU6-181P-201ENST00000363225 107 ntBASIC-2.71□□□□□ -2.84
VPS13CQ709C8 RNU6-1321P-201ENST00000390905 107 ntBASIC-2.71□□□□□ -2.84
VPS13CQ709C8 RNU6-1254P-201ENST00000391266 104 ntBASIC-2.71□□□□□ -2.84
VPS13CQ709C8 AL117351.1-201ENST00000438864 766 ntBASIC-2.71□□□□□ -2.84
VPS13CQ709C8 SNORD18C-201ENST00000362704 69 ntBASIC-2.71□□□□□ -2.84
VPS13CQ709C8 SNORD101-201ENST00000384027 73 ntBASIC-2.71□□□□□ -2.84
VPS13CQ709C8 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC-2.71□□□□□ -2.84
VPS13CQ709C8 MIR2681-201ENST00000581814 105 ntBASIC-2.71□□□□□ -2.84
VPS13CQ709C8 DLEU2_5.2-201ENST00000610606 84 ntBASIC-2.71□□□□□ -2.84
VPS13CQ709C8 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-2.71□□□□□ -2.84
VPS13CQ709C8 MIR379-201ENST00000362218 67 ntBASIC-2.71□□□□□ -2.84
VPS13CQ709C8 RNU6-834P-201ENST00000362367 110 ntBASIC-2.71□□□□□ -2.84
VPS13CQ709C8 Y_RNA.596-201ENST00000410462 109 ntBASIC-2.71□□□□□ -2.84
VPS13CQ709C8 RNU6-607P-201ENST00000411283 108 ntBASIC-2.71□□□□□ -2.84
VPS13CQ709C8 EEF1A1P40-201ENST00000412883 573 ntBASIC-2.71□□□□□ -2.84
VPS13CQ709C8 Y_RNA.683-201ENST00000516508 93 ntBASIC-2.71□□□□□ -2.84
VPS13CQ709C8 RNU6-827P-201ENST00000365553 106 ntBASIC-2.72□□□□□ -2.84
VPS13CQ709C8 AC073415.1-201ENST00000449240 153 ntBASIC-2.72□□□□□ -2.84
VPS13CQ709C8 RNU7-136P-201ENST00000458819 69 ntBASIC-2.72□□□□□ -2.84
VPS13CQ709C8 RNU6-159P-201ENST00000391080 106 ntBASIC-2.72□□□□□ -2.85
VPS13CQ709C8 RNU6-541P-201ENST00000384709 110 ntBASIC-2.73□□□□□ -2.85
VPS13CQ709C8 RNU7-80P-201ENST00000459562 61 ntBASIC-2.73□□□□□ -2.85
VPS13CQ709C8 RNU6-693P-201ENST00000516134 107 ntBASIC-2.73□□□□□ -2.85
VPS13CQ709C8 RNU6-1161P-201ENST00000516176 102 ntBASIC-2.73□□□□□ -2.85
VPS13CQ709C8 RMST_3.1-201ENST00000611651 109 ntBASIC-2.73□□□□□ -2.85
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms