Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 RNY4P34-201ENST00000364779 95 ntBASIC-1.17□□□□□ -2.6
CSPG4Q6UVK1 Y_RNA.299-201ENST00000364973 94 ntBASIC-1.17□□□□□ -2.6
CSPG4Q6UVK1 SNORD61-201ENST00000384252 73 ntBASIC-1.17□□□□□ -2.6
CSPG4Q6UVK1 Y_RNA.470-201ENST00000384307 117 ntBASIC-1.17□□□□□ -2.6
CSPG4Q6UVK1 AL356010.1-201ENST00000456364 102 ntBASIC-1.17□□□□□ -2.6
CSPG4Q6UVK1 RNU6-559P-201ENST00000516151 98 ntBASIC-1.17□□□□□ -2.6
CSPG4Q6UVK1 AC019193.3-201ENST00000609144 554 ntBASIC-1.17□□□□□ -2.6
CSPG4Q6UVK1 DLEU2_5.1-201ENST00000615567 84 ntBASIC-1.17□□□□□ -2.6
CSPG4Q6UVK1 Y_RNA.54-201ENST00000362766 105 ntBASIC-1.17□□□□□ -2.6
CSPG4Q6UVK1 RNU6-128P-201ENST00000383976 107 ntBASIC-1.17□□□□□ -2.6
CSPG4Q6UVK1 MIR206-201ENST00000384872 86 ntBASIC-1.17□□□□□ -2.6
CSPG4Q6UVK1 RNU6-588P-201ENST00000410281 105 ntBASIC-1.17□□□□□ -2.6
CSPG4Q6UVK1 AL160004.2-201ENST00000432935 350 ntBASIC-1.17□□□□□ -2.6
CSPG4Q6UVK1 SNORD5.1-201ENST00000458800 75 ntBASIC-1.17□□□□□ -2.6
CSPG4Q6UVK1 RNU6-893P-201ENST00000458841 100 ntBASIC-1.17□□□□□ -2.6
CSPG4Q6UVK1 RNU7-80P-201ENST00000459562 61 ntBASIC-1.17□□□□□ -2.6
CSPG4Q6UVK1 RNU6-1208P-201ENST00000459588 107 ntBASIC-1.17□□□□□ -2.6
CSPG4Q6UVK1 SNORA19.3-201ENST00000516165 130 ntBASIC-1.17□□□□□ -2.6
CSPG4Q6UVK1 AC011476.5-201ENST00000615594 130 ntBASIC-1.17□□□□□ -2.6
CSPG4Q6UVK1 RNU6-164P-201ENST00000364604 103 ntBASIC-1.18□□□□□ -2.6
CSPG4Q6UVK1 SNORA26.4-201ENST00000391188 123 ntBASIC-1.18□□□□□ -2.6
CSPG4Q6UVK1 RNU7-113P-201ENST00000459273 62 ntBASIC-1.18□□□□□ -2.6
CSPG4Q6UVK1 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-1.18□□□□□ -2.6
CSPG4Q6UVK1 AC108019.1-201ENST00000512540 175 ntBASIC-1.18□□□□□ -2.6
CSPG4Q6UVK1 MIR4500-201ENST00000579472 76 ntBASIC-1.18□□□□□ -2.6
CSPG4Q6UVK1 AC006504.6-201ENST00000590142 199 ntBASIC-1.18□□□□□ -2.6
CSPG4Q6UVK1 AC092747.3-201ENST00000603769 301 ntBASIC-1.18□□□□□ -2.6
CSPG4Q6UVK1 Y_RNA.381-201ENST00000365666 102 ntBASIC-1.18□□□□□ -2.6
CSPG4Q6UVK1 Y_RNA.461-201ENST00000384263 103 ntBASIC-1.18□□□□□ -2.6
CSPG4Q6UVK1 RNU6-83P-201ENST00000384568 112 ntBASIC-1.18□□□□□ -2.6
CSPG4Q6UVK1 Y_RNA.556-201ENST00000384677 113 ntBASIC-1.18□□□□□ -2.6
CSPG4Q6UVK1 SNORD37.1-201ENST00000390968 65 ntBASIC-1.18□□□□□ -2.6
CSPG4Q6UVK1 MIR2355-201ENST00000517199 87 ntBASIC-1.18□□□□□ -2.6
CSPG4Q6UVK1 AC068339.1-201ENST00000526965 141 ntBASIC-1.18□□□□□ -2.6
CSPG4Q6UVK1 AL021707.8-201ENST00000609428 183 ntBASIC-1.18□□□□□ -2.6
CSPG4Q6UVK1 MIR548AY-201ENST00000617669 107 ntBASIC-1.18□□□□□ -2.6
CSPG4Q6UVK1 AL593851.1-201ENST00000426171 157 ntBASIC-1.19□□□□□ -2.6
CSPG4Q6UVK1 RNU7-195P-201ENST00000458793 62 ntBASIC-1.19□□□□□ -2.6
CSPG4Q6UVK1 RNU6-470P-201ENST00000515954 104 ntBASIC-1.19□□□□□ -2.6
CSPG4Q6UVK1 MTCO2P4-201ENST00000517968 247 ntBASIC-1.19□□□□□ -2.6
CSPG4Q6UVK1 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.2□□□□□ -2.6
CSPG4Q6UVK1 SNORA53-201ENST00000391141 249 ntBASIC-1.2□□□□□ -2.6
CSPG4Q6UVK1 AL118558.2-201ENST00000556294 238 ntBASIC-1.2□□□□□ -2.6
CSPG4Q6UVK1 MTATP6P24-201ENST00000576835 677 ntBASIC-1.2□□□□□ -2.6
CSPG4Q6UVK1 U6.100-201ENST00000636230 99 ntBASIC-1.2□□□□□ -2.6
CSPG4Q6UVK1 RNU6-254P-201ENST00000363377 107 ntBASIC-1.2□□□□□ -2.6
CSPG4Q6UVK1 RNU6-801P-201ENST00000364087 105 ntBASIC-1.2□□□□□ -2.6
CSPG4Q6UVK1 Y_RNA.207-201ENST00000364142 106 ntBASIC-1.2□□□□□ -2.6
CSPG4Q6UVK1 SNORD115-27-201ENST00000364430 82 ntBASIC-1.2□□□□□ -2.6
CSPG4Q6UVK1 SNORA72.4-201ENST00000384174 132 ntBASIC-1.2□□□□□ -2.6
CSPG4Q6UVK1 Y_RNA.601-201ENST00000410500 113 ntBASIC-1.2□□□□□ -2.6
CSPG4Q6UVK1 RNU6-126P-201ENST00000516685 103 ntBASIC-1.2□□□□□ -2.6
CSPG4Q6UVK1 RNU7-137P-201ENST00000516788 62 ntBASIC-1.2□□□□□ -2.6
CSPG4Q6UVK1 MIR4999-201ENST00000585029 91 ntBASIC-1.2□□□□□ -2.6
CSPG4Q6UVK1 AC060780.3-201ENST00000589464 80 ntBASIC-1.2□□□□□ -2.6
CSPG4Q6UVK1 AL049861.1-201ENST00000603130 150 ntBASIC-1.2□□□□□ -2.6
CSPG4Q6UVK1 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-1.2□□□□□ -2.6
CSPG4Q6UVK1 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-1.2□□□□□ -2.6
CSPG4Q6UVK1 RNU5E-4P-201ENST00000364931 120 ntBASIC-1.21□□□□□ -2.6
CSPG4Q6UVK1 RNU6-484P-201ENST00000384016 107 ntBASIC-1.21□□□□□ -2.6
CSPG4Q6UVK1 Y_RNA.486-201ENST00000384398 107 ntBASIC-1.21□□□□□ -2.6
CSPG4Q6UVK1 MIR516A2-201ENST00000384888 90 ntBASIC-1.21□□□□□ -2.6
CSPG4Q6UVK1 MIR516A1-201ENST00000385033 90 ntBASIC-1.21□□□□□ -2.6
CSPG4Q6UVK1 AL353691.2-201ENST00000443795 59 ntBASIC-1.21□□□□□ -2.6
CSPG4Q6UVK1 MTND2P22-201ENST00000444325 1033 ntBASIC-1.21□□□□□ -2.6
CSPG4Q6UVK1 MIR1270-201ENST00000459320 83 ntBASIC-1.21□□□□□ -2.6
CSPG4Q6UVK1 AC083904.1-201ENST00000487828 231 ntBASIC-1.21□□□□□ -2.6
CSPG4Q6UVK1 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.21□□□□□ -2.6
CSPG4Q6UVK1 AC124303.1-201ENST00000605703 360 ntBASIC-1.21□□□□□ -2.6
CSPG4Q6UVK1 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-1.21□□□□□ -2.6
CSPG4Q6UVK1 Y_RNA.106-201ENST00000363189 100 ntBASIC-1.21□□□□□ -2.6
CSPG4Q6UVK1 RNU6-660P-201ENST00000364566 109 ntBASIC-1.21□□□□□ -2.6
CSPG4Q6UVK1 Y_RNA.634-201ENST00000364811 113 ntBASIC-1.21□□□□□ -2.6
CSPG4Q6UVK1 Y_RNA.364-201ENST00000365532 101 ntBASIC-1.21□□□□□ -2.6
CSPG4Q6UVK1 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.21□□□□□ -2.6
CSPG4Q6UVK1 RNA5SP86-201ENST00000390869 98 ntBASIC-1.21□□□□□ -2.6
CSPG4Q6UVK1 Y_RNA.596-201ENST00000410462 109 ntBASIC-1.21□□□□□ -2.6
CSPG4Q6UVK1 RNU6-276P-201ENST00000516114 96 ntBASIC-1.21□□□□□ -2.6
CSPG4Q6UVK1 MIR4273-201ENST00000582824 84 ntBASIC-1.21□□□□□ -2.6
CSPG4Q6UVK1 AP001506.1-201ENST00000615444 211 ntBASIC-1.21□□□□□ -2.6
CSPG4Q6UVK1 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.22□□□□□ -2.6
CSPG4Q6UVK1 RNU6-235P-201ENST00000362644 107 ntBASIC-1.22□□□□□ -2.6
CSPG4Q6UVK1 RNU5F-7P-201ENST00000363696 115 ntBASIC-1.22□□□□□ -2.6
CSPG4Q6UVK1 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.22□□□□□ -2.6
CSPG4Q6UVK1 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.22□□□□□ -2.6
CSPG4Q6UVK1 RNU6-337P-201ENST00000391243 106 ntBASIC-1.22□□□□□ -2.6
CSPG4Q6UVK1 RNU2-66P-201ENST00000410650 161 ntBASIC-1.22□□□□□ -2.6
CSPG4Q6UVK1 MIR2113-201ENST00000459007 91 ntBASIC-1.22□□□□□ -2.6
CSPG4Q6UVK1 AC055872.1-201ENST00000570978 278 ntBASIC-1.22□□□□□ -2.6
CSPG4Q6UVK1 MIR4662B-201ENST00000579498 81 ntBASIC-1.22□□□□□ -2.6
CSPG4Q6UVK1 MIR4464-201ENST00000580818 92 ntBASIC-1.22□□□□□ -2.6
CSPG4Q6UVK1 Y_RNA.440-201ENST00000384120 114 ntBASIC-1.22□□□□□ -2.61
CSPG4Q6UVK1 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-1.22□□□□□ -2.61
CSPG4Q6UVK1 MIR548H1-201ENST00000408610 102 ntBASIC-1.22□□□□□ -2.61
CSPG4Q6UVK1 RNU2-55P-201ENST00000411146 174 ntBASIC-1.22□□□□□ -2.61
CSPG4Q6UVK1 MIR6841-201ENST00000637129 72 ntBASIC-1.22□□□□□ -2.61
CSPG4Q6UVK1 AL589826.1-201ENST00000340697 249 ntBASIC-1.23□□□□□ -2.61
CSPG4Q6UVK1 Y_RNA.383-201ENST00000383855 97 ntBASIC-1.23□□□□□ -2.61
CSPG4Q6UVK1 RNU6-1103P-201ENST00000384150 107 ntBASIC-1.23□□□□□ -2.61
CSPG4Q6UVK1 MT-TT-201ENST00000387460 66 ntBASIC-1.23□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms