Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.19□□□□□ -2.06
CNKSR3Q6P9H4 SNORA70.7-201ENST00000384159 133 ntBASIC2.18□□□□□ -2.06
CNKSR3Q6P9H4 RNU6-242P-201ENST00000384359 107 ntBASIC2.18□□□□□ -2.06
CNKSR3Q6P9H4 RNU7-73P-201ENST00000458743 63 ntBASIC2.18□□□□□ -2.06
CNKSR3Q6P9H4 RNA5SP402-201ENST00000517148 110 ntBASIC2.18□□□□□ -2.06
CNKSR3Q6P9H4 MIR376B-201ENST00000614515 100 ntBASIC2.18□□□□□ -2.06
CNKSR3Q6P9H4 AL512310.12-203ENST00000640543 90 ntBASIC2.18□□□□□ -2.06
CNKSR3Q6P9H4 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.18□□□□□ -2.06
CNKSR3Q6P9H4 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.18□□□□□ -2.06
CNKSR3Q6P9H4 RNU6-1125P-201ENST00000363601 107 ntBASIC2.17□□□□□ -2.06
CNKSR3Q6P9H4 SNORA1.1-201ENST00000364671 133 ntBASIC2.17□□□□□ -2.06
CNKSR3Q6P9H4 Y_RNA.313-201ENST00000365095 103 ntBASIC2.17□□□□□ -2.06
CNKSR3Q6P9H4 RNU6-1307P-201ENST00000391012 103 ntBASIC2.17□□□□□ -2.06
CNKSR3Q6P9H4 Y_RNA.620-201ENST00000411009 88 ntBASIC2.17□□□□□ -2.06
CNKSR3Q6P9H4 AC090844.1-201ENST00000422019 156 ntBASIC2.17□□□□□ -2.06
CNKSR3Q6P9H4 AL445685.2-201ENST00000422551 342 ntBASIC2.17□□□□□ -2.06
CNKSR3Q6P9H4 AC108667.1-201ENST00000428618 249 ntBASIC2.17□□□□□ -2.06
CNKSR3Q6P9H4 HMGN1P33-201ENST00000432945 451 ntBASIC2.17□□□□□ -2.06
CNKSR3Q6P9H4 SNORD123-201ENST00000459473 70 ntBASIC2.17□□□□□ -2.06
CNKSR3Q6P9H4 RNU6-1053P-201ENST00000515930 101 ntBASIC2.17□□□□□ -2.06
CNKSR3Q6P9H4 RNU6-1006P-201ENST00000516998 103 ntBASIC2.17□□□□□ -2.06
CNKSR3Q6P9H4 RNA5SP437-201ENST00000517249 129 ntBASIC2.17□□□□□ -2.06
CNKSR3Q6P9H4 DNAJC19P9-201ENST00000555084 351 ntBASIC2.17□□□□□ -2.06
CNKSR3Q6P9H4 AC243994.1-201ENST00000618627 109 ntBASIC2.17□□□□□ -2.06
CNKSR3Q6P9H4 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
CNKSR3Q6P9H4 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
CNKSR3Q6P9H4 Y_RNA.96-201ENST00000363092 109 ntBASIC2.16□□□□□ -2.06
CNKSR3Q6P9H4 Y_RNA.244-201ENST00000364484 109 ntBASIC2.16□□□□□ -2.06
CNKSR3Q6P9H4 SNORD58A-201ENST00000383875 65 ntBASIC2.16□□□□□ -2.06
CNKSR3Q6P9H4 RNU6-950P-201ENST00000384651 107 ntBASIC2.16□□□□□ -2.06
CNKSR3Q6P9H4 MIR17-201ENST00000385012 84 ntBASIC2.16□□□□□ -2.06
CNKSR3Q6P9H4 U8.15-201ENST00000390947 134 ntBASIC2.16□□□□□ -2.06
CNKSR3Q6P9H4 RNA5SP212-201ENST00000391223 107 ntBASIC2.16□□□□□ -2.06
CNKSR3Q6P9H4 RNU7-171P-201ENST00000459581 62 ntBASIC2.16□□□□□ -2.06
CNKSR3Q6P9H4 MIR4668-201ENST00000582284 70 ntBASIC2.16□□□□□ -2.06
CNKSR3Q6P9H4 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.16□□□□□ -2.06
CNKSR3Q6P9H4 AC021506.2-201ENST00000612354 169 ntBASIC2.16□□□□□ -2.06
CNKSR3Q6P9H4 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.16□□□□□ -2.06
CNKSR3Q6P9H4 AL596028.1-201ENST00000326971 197 ntBASIC2.15□□□□□ -2.07
CNKSR3Q6P9H4 Y_RNA.221-201ENST00000364248 96 ntBASIC2.15□□□□□ -2.07
CNKSR3Q6P9H4 RNU6-342P-201ENST00000384521 104 ntBASIC2.15□□□□□ -2.07
CNKSR3Q6P9H4 RNU6-279P-201ENST00000391297 101 ntBASIC2.15□□□□□ -2.07
CNKSR3Q6P9H4 RNA5SP181-201ENST00000410246 98 ntBASIC2.15□□□□□ -2.07
CNKSR3Q6P9H4 RNA5SP261-201ENST00000410536 106 ntBASIC2.15□□□□□ -2.07
CNKSR3Q6P9H4 AC099513.1-201ENST00000490423 301 ntBASIC2.15□□□□□ -2.07
CNKSR3Q6P9H4 MIR4666B-201ENST00000578142 81 ntBASIC2.15□□□□□ -2.07
CNKSR3Q6P9H4 RNU6-1163P-201ENST00000364516 107 ntBASIC2.14□□□□□ -2.07
CNKSR3Q6P9H4 RNU6-296P-201ENST00000384608 107 ntBASIC2.14□□□□□ -2.07
CNKSR3Q6P9H4 RPL23AP6-201ENST00000446637 472 ntBASIC2.14□□□□□ -2.07
CNKSR3Q6P9H4 RNU7-2P-201ENST00000516096 62 ntBASIC2.14□□□□□ -2.07
CNKSR3Q6P9H4 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.14□□□□□ -2.07
CNKSR3Q6P9H4 SUB1P4-201ENST00000566062 339 ntBASIC2.14□□□□□ -2.07
CNKSR3Q6P9H4 MIR4439-201ENST00000583746 80 ntBASIC2.14□□□□□ -2.07
CNKSR3Q6P9H4 AC096720.1-201ENST00000604441 183 ntBASIC2.14□□□□□ -2.07
CNKSR3Q6P9H4 MIR8055-201ENST00000610739 97 ntBASIC2.14□□□□□ -2.07
CNKSR3Q6P9H4 AL773524.1-201ENST00000614065 229 ntBASIC2.14□□□□□ -2.07
CNKSR3Q6P9H4 SEPT14P17-201ENST00000617978 177 ntBASIC2.14□□□□□ -2.07
CNKSR3Q6P9H4 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
CNKSR3Q6P9H4 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
CNKSR3Q6P9H4 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CNKSR3Q6P9H4 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.13□□□□□ -2.07
CNKSR3Q6P9H4 Y_RNA.437-201ENST00000384113 113 ntBASIC2.13□□□□□ -2.07
CNKSR3Q6P9H4 RNY1P4-201ENST00000384595 115 ntBASIC2.13□□□□□ -2.07
CNKSR3Q6P9H4 MIR206-201ENST00000384872 86 ntBASIC2.13□□□□□ -2.07
CNKSR3Q6P9H4 RNU2-7P-201ENST00000410794 178 ntBASIC2.13□□□□□ -2.07
CNKSR3Q6P9H4 RPS27P21-201ENST00000486977 252 ntBASIC2.13□□□□□ -2.07
CNKSR3Q6P9H4 RNU6-86P-201ENST00000606534 107 ntBASIC2.13□□□□□ -2.07
CNKSR3Q6P9H4 AC103810.7-201ENST00000607821 91 ntBASIC2.13□□□□□ -2.07
CNKSR3Q6P9H4 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.13□□□□□ -2.07
CNKSR3Q6P9H4 RNU6-112P-201ENST00000363599 104 ntBASIC2.12□□□□□ -2.07
CNKSR3Q6P9H4 SNORD116-10-201ENST00000363791 102 ntBASIC2.12□□□□□ -2.07
CNKSR3Q6P9H4 MIR520A-201ENST00000384862 85 ntBASIC2.12□□□□□ -2.07
CNKSR3Q6P9H4 MIR660-201ENST00000385235 97 ntBASIC2.12□□□□□ -2.07
CNKSR3Q6P9H4 SNORA17.3-201ENST00000391159 129 ntBASIC2.12□□□□□ -2.07
CNKSR3Q6P9H4 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.12□□□□□ -2.07
CNKSR3Q6P9H4 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.12□□□□□ -2.07
CNKSR3Q6P9H4 MIR5002-201ENST00000584713 97 ntBASIC2.12□□□□□ -2.07
CNKSR3Q6P9H4 AL513423.1-201ENST00000621695 132 ntBASIC2.12□□□□□ -2.07
CNKSR3Q6P9H4 AC006160.2-201ENST00000637708 154 ntBASIC2.12□□□□□ -2.07
CNKSR3Q6P9H4 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CNKSR3Q6P9H4 MIRLET7G-201ENST00000362280 84 ntBASIC2.11□□□□□ -2.07
CNKSR3Q6P9H4 Y_RNA.191-201ENST00000363972 113 ntBASIC2.11□□□□□ -2.07
CNKSR3Q6P9H4 Y_RNA.537-201ENST00000384626 109 ntBASIC2.11□□□□□ -2.07
CNKSR3Q6P9H4 MIR34C-201ENST00000384831 77 ntBASIC2.11□□□□□ -2.07
CNKSR3Q6P9H4 RNA5SP100-201ENST00000410903 110 ntBASIC2.11□□□□□ -2.07
CNKSR3Q6P9H4 RNA5SP59-201ENST00000410922 110 ntBASIC2.11□□□□□ -2.07
CNKSR3Q6P9H4 AC244636.1-201ENST00000421152 228 ntBASIC2.11□□□□□ -2.07
CNKSR3Q6P9H4 RNU6-857P-201ENST00000515893 110 ntBASIC2.11□□□□□ -2.07
CNKSR3Q6P9H4 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.11□□□□□ -2.07
CNKSR3Q6P9H4 RNU7-35P-201ENST00000517174 62 ntBASIC2.11□□□□□ -2.07
CNKSR3Q6P9H4 MIR5089-201ENST00000580047 84 ntBASIC2.11□□□□□ -2.07
CNKSR3Q6P9H4 snoU13.31-201ENST00000607291 104 ntBASIC2.11□□□□□ -2.07
CNKSR3Q6P9H4 AL137847.3-201ENST00000611521 109 ntBASIC2.11□□□□□ -2.07
CNKSR3Q6P9H4 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.11□□□□□ -2.07
CNKSR3Q6P9H4 MIR8065-201ENST00000620577 100 ntBASIC2.11□□□□□ -2.07
CNKSR3Q6P9H4 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.11□□□□□ -2.07
CNKSR3Q6P9H4 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
CNKSR3Q6P9H4 RNU6-457P-201ENST00000363999 107 ntBASIC2.1□□□□□ -2.07
CNKSR3Q6P9H4 AC245047.7-201ENST00000440265 293 ntBASIC2.1□□□□□ -2.07
CNKSR3Q6P9H4 MIR4299-201ENST00000577899 72 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 187.4 ms