Protein–RNA interactions for Protein: Q66K89

E4F1, Transcription factor E4F1, humanhuman

Predicted RBP Predictions only

Length 784 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1Q66K89 RNA5SP89-201ENST00000410300 108 ntBASIC1.84□□□□□ -2.11
E4F1Q66K89 RNU6-766P-201ENST00000362478 107 ntBASIC1.83□□□□□ -2.12
E4F1Q66K89 SNORD33-201ENST00000362761 85 ntBASIC1.83□□□□□ -2.12
E4F1Q66K89 RNU4-67P-201ENST00000364569 141 ntBASIC1.83□□□□□ -2.12
E4F1Q66K89 SNORA7.5-201ENST00000410672 110 ntBASIC1.83□□□□□ -2.12
E4F1Q66K89 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.83□□□□□ -2.12
E4F1Q66K89 Y_RNA.328-201ENST00000365208 113 ntBASIC1.82□□□□□ -2.12
E4F1Q66K89 RNU6-409P-201ENST00000384114 104 ntBASIC1.82□□□□□ -2.12
E4F1Q66K89 RNU6-1086P-201ENST00000410930 100 ntBASIC1.82□□□□□ -2.12
E4F1Q66K89 snoU13.25-201ENST00000458945 104 ntBASIC1.82□□□□□ -2.12
E4F1Q66K89 RNU6-537P-201ENST00000517277 103 ntBASIC1.82□□□□□ -2.12
E4F1Q66K89 MIR3198-2-201ENST00000577868 80 ntBASIC1.82□□□□□ -2.12
E4F1Q66K89 FAM71BP1-201ENST00000604431 523 ntBASIC1.82□□□□□ -2.12
E4F1Q66K89 PRELID3BP2-201ENST00000605362 201 ntBASIC1.82□□□□□ -2.12
E4F1Q66K89 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.82□□□□□ -2.12
E4F1Q66K89 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
E4F1Q66K89 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
E4F1Q66K89 RNU6-363P-201ENST00000362895 105 ntBASIC1.81□□□□□ -2.12
E4F1Q66K89 U8.2-201ENST00000363156 134 ntBASIC1.81□□□□□ -2.12
E4F1Q66K89 RNU6-1113P-201ENST00000384348 107 ntBASIC1.81□□□□□ -2.12
E4F1Q66K89 RNA5SP237-201ENST00000410414 113 ntBASIC1.81□□□□□ -2.12
E4F1Q66K89 SNORA19.1-201ENST00000410656 129 ntBASIC1.81□□□□□ -2.12
E4F1Q66K89 RNU6-733P-201ENST00000410759 104 ntBASIC1.81□□□□□ -2.12
E4F1Q66K89 AP000942.3-201ENST00000603702 160 ntBASIC1.81□□□□□ -2.12
E4F1Q66K89 MIR8081-201ENST00000611533 95 ntBASIC1.81□□□□□ -2.12
E4F1Q66K89 AC084768.2-201ENST00000622736 221 ntBASIC1.81□□□□□ -2.12
E4F1Q66K89 RNU6-396P-201ENST00000365369 105 ntBASIC1.8□□□□□ -2.12
E4F1Q66K89 SNORA40.18-201ENST00000391200 128 ntBASIC1.8□□□□□ -2.12
E4F1Q66K89 SNORA11.2-201ENST00000408318 127 ntBASIC1.8□□□□□ -2.12
E4F1Q66K89 AC027119.1-201ENST00000440877 241 ntBASIC1.8□□□□□ -2.12
E4F1Q66K89 RPL30P7-201ENST00000479312 323 ntBASIC1.8□□□□□ -2.12
E4F1Q66K89 RNU7-35P-201ENST00000517174 62 ntBASIC1.8□□□□□ -2.12
E4F1Q66K89 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
E4F1Q66K89 MIR103A2-201ENST00000362154 78 ntBASIC1.79□□□□□ -2.12
E4F1Q66K89 SNORD114-1-201ENST00000362705 72 ntBASIC1.79□□□□□ -2.12
E4F1Q66K89 MIR605-201ENST00000385078 83 ntBASIC1.79□□□□□ -2.12
E4F1Q66K89 U8.13-201ENST00000390842 128 ntBASIC1.79□□□□□ -2.12
E4F1Q66K89 MIR1302-7-201ENST00000408841 72 ntBASIC1.79□□□□□ -2.12
E4F1Q66K89 AL133373.1-201ENST00000497098 94 ntBASIC1.79□□□□□ -2.12
E4F1Q66K89 RNU7-79P-201ENST00000516082 62 ntBASIC1.79□□□□□ -2.12
E4F1Q66K89 Y_RNA.677-201ENST00000516401 85 ntBASIC1.79□□□□□ -2.12
E4F1Q66K89 RNU6-521P-201ENST00000516663 105 ntBASIC1.79□□□□□ -2.12
E4F1Q66K89 MIR590-201ENST00000385008 97 ntBASIC1.78□□□□□ -2.12
E4F1Q66K89 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.78□□□□□ -2.12
E4F1Q66K89 AC244023.1-201ENST00000426884 112 ntBASIC1.78□□□□□ -2.12
E4F1Q66K89 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.78□□□□□ -2.12
E4F1Q66K89 AC008834.1-201ENST00000511612 175 ntBASIC1.78□□□□□ -2.12
E4F1Q66K89 RNA5SP182-201ENST00000516064 82 ntBASIC1.78□□□□□ -2.12
E4F1Q66K89 AL512310.8-201ENST00000550183 120 ntBASIC1.78□□□□□ -2.12
E4F1Q66K89 MIR3664-201ENST00000579074 99 ntBASIC1.78□□□□□ -2.12
E4F1Q66K89 AP000753.3-201ENST00000604083 169 ntBASIC1.78□□□□□ -2.12
E4F1Q66K89 AC242498.1-201ENST00000604134 111 ntBASIC1.78□□□□□ -2.12
E4F1Q66K89 MIR6845-201ENST00000613182 61 ntBASIC1.78□□□□□ -2.12
E4F1Q66K89 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.77□□□□□ -2.13
E4F1Q66K89 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
E4F1Q66K89 Y_RNA.360-201ENST00000365512 102 ntBASIC1.77□□□□□ -2.13
E4F1Q66K89 SNORA70B-201ENST00000384210 135 ntBASIC1.77□□□□□ -2.13
E4F1Q66K89 RNU6-205P-201ENST00000390858 107 ntBASIC1.77□□□□□ -2.13
E4F1Q66K89 RN7SL429P-201ENST00000479090 223 ntBASIC1.77□□□□□ -2.13
E4F1Q66K89 RN7SL489P-201ENST00000486185 223 ntBASIC1.77□□□□□ -2.13
E4F1Q66K89 RN7SL327P-201ENST00000488659 223 ntBASIC1.77□□□□□ -2.13
E4F1Q66K89 SNORD67.1-201ENST00000516618 108 ntBASIC1.77□□□□□ -2.13
E4F1Q66K89 MIR2115-201ENST00000516657 100 ntBASIC1.77□□□□□ -2.13
E4F1Q66K89 RN7SL853P-201ENST00000617250 223 ntBASIC1.77□□□□□ -2.13
E4F1Q66K89 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
E4F1Q66K89 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
E4F1Q66K89 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
E4F1Q66K89 RNA5SP264-201ENST00000363115 107 ntBASIC1.76□□□□□ -2.13
E4F1Q66K89 RNU4-36P-201ENST00000364294 144 ntBASIC1.76□□□□□ -2.13
E4F1Q66K89 MIR320A-201ENST00000385302 82 ntBASIC1.76□□□□□ -2.13
E4F1Q66K89 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.76□□□□□ -2.13
E4F1Q66K89 RNU6-109P-201ENST00000516364 107 ntBASIC1.76□□□□□ -2.13
E4F1Q66K89 RNU6-184P-201ENST00000516514 107 ntBASIC1.76□□□□□ -2.13
E4F1Q66K89 RNU6-165P-201ENST00000517170 99 ntBASIC1.76□□□□□ -2.13
E4F1Q66K89 DEFB131E-201ENST00000532329 154 ntBASIC1.76□□□□□ -2.13
E4F1Q66K89 AC105081.1-201ENST00000617727 106 ntBASIC1.76□□□□□ -2.13
E4F1Q66K89 AL512310.12-203ENST00000640543 90 ntBASIC1.76□□□□□ -2.13
E4F1Q66K89 MIR206-201ENST00000384872 86 ntBASIC1.75□□□□□ -2.13
E4F1Q66K89 MIR588-201ENST00000384900 83 ntBASIC1.75□□□□□ -2.13
E4F1Q66K89 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
E4F1Q66K89 RNU6-679P-201ENST00000391003 106 ntBASIC1.75□□□□□ -2.13
E4F1Q66K89 MIR1185-1-201ENST00000408598 86 ntBASIC1.75□□□□□ -2.13
E4F1Q66K89 RPS27P16-201ENST00000425758 201 ntBASIC1.75□□□□□ -2.13
E4F1Q66K89 RNU7-2P-201ENST00000516096 62 ntBASIC1.75□□□□□ -2.13
E4F1Q66K89 RN7SKP88-201ENST00000516847 250 ntBASIC1.75□□□□□ -2.13
E4F1Q66K89 MIR4422-201ENST00000581938 83 ntBASIC1.75□□□□□ -2.13
E4F1Q66K89 7SK.8-201ENST00000612110 250 ntBASIC1.75□□□□□ -2.13
E4F1Q66K89 7SK.11-201ENST00000615477 250 ntBASIC1.75□□□□□ -2.13
E4F1Q66K89 7SK.13-201ENST00000622040 250 ntBASIC1.75□□□□□ -2.13
E4F1Q66K89 SNORD115-35-201ENST00000365122 82 ntBASIC1.74□□□□□ -2.13
E4F1Q66K89 Y_RNA.544-201ENST00000384650 113 ntBASIC1.74□□□□□ -2.13
E4F1Q66K89 MIR583-201ENST00000384846 75 ntBASIC1.74□□□□□ -2.13
E4F1Q66K89 MIR577-201ENST00000385196 96 ntBASIC1.74□□□□□ -2.13
E4F1Q66K89 RNU1-78P-201ENST00000391248 165 ntBASIC1.74□□□□□ -2.13
E4F1Q66K89 RNA5SP95-201ENST00000410319 137 ntBASIC1.74□□□□□ -2.13
E4F1Q66K89 snoU13.2-201ENST00000459201 104 ntBASIC1.74□□□□□ -2.13
E4F1Q66K89 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.74□□□□□ -2.13
E4F1Q66K89 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.74□□□□□ -2.13
E4F1Q66K89 AC141846.1-201ENST00000568348 142 ntBASIC1.74□□□□□ -2.13
E4F1Q66K89 MIR4264-201ENST00000583520 66 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 234.1 ms