Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 RNU6-508P-201ENST00000363231 103 ntBASIC1.13□□□□□ -2.23
RNF220Q5VTB9 Y_RNA.164-201ENST00000363709 102 ntBASIC1.13□□□□□ -2.23
RNF220Q5VTB9 MIR569-201ENST00000385228 96 ntBASIC1.13□□□□□ -2.23
RNF220Q5VTB9 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.13□□□□□ -2.23
RNF220Q5VTB9 RNA5SP237-201ENST00000410414 113 ntBASIC1.13□□□□□ -2.23
RNF220Q5VTB9 PDCD5P2-201ENST00000507570 312 ntBASIC1.13□□□□□ -2.23
RNF220Q5VTB9 RNU6-1053P-201ENST00000515930 101 ntBASIC1.13□□□□□ -2.23
RNF220Q5VTB9 RNU6-1110P-201ENST00000516462 101 ntBASIC1.13□□□□□ -2.23
RNF220Q5VTB9 AP001328.1-201ENST00000528550 176 ntBASIC1.13□□□□□ -2.23
RNF220Q5VTB9 MIR4305-201ENST00000583252 102 ntBASIC1.13□□□□□ -2.23
RNF220Q5VTB9 RNY1P5-201ENST00000383890 115 ntBASIC1.12□□□□□ -2.23
RNF220Q5VTB9 RNU4-62P-201ENST00000410125 130 ntBASIC1.12□□□□□ -2.23
RNF220Q5VTB9 SNORD83.1-201ENST00000411362 77 ntBASIC1.12□□□□□ -2.23
RNF220Q5VTB9 RPS26P5-201ENST00000418544 335 ntBASIC1.12□□□□□ -2.23
RNF220Q5VTB9 BTF3P4-201ENST00000418852 495 ntBASIC1.12□□□□□ -2.23
RNF220Q5VTB9 RNU7-95P-201ENST00000459222 64 ntBASIC1.12□□□□□ -2.23
RNF220Q5VTB9 snoU13.21-201ENST00000459368 105 ntBASIC1.12□□□□□ -2.23
RNF220Q5VTB9 UBL5P1-201ENST00000507979 193 ntBASIC1.12□□□□□ -2.23
RNF220Q5VTB9 RNU5E-3P-201ENST00000515913 68 ntBASIC1.12□□□□□ -2.23
RNF220Q5VTB9 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.12□□□□□ -2.23
RNF220Q5VTB9 AC010332.2-201ENST00000613083 1904 ntBASIC1.12□□□□□ -2.23
RNF220Q5VTB9 Y_RNA.420-201ENST00000384043 110 ntBASIC1.11□□□□□ -2.23
RNF220Q5VTB9 RNU6-1237P-201ENST00000384777 107 ntBASIC1.11□□□□□ -2.23
RNF220Q5VTB9 MT-TF-201ENST00000387314 71 ntBASIC1.11□□□□□ -2.23
RNF220Q5VTB9 SNORD89-201ENST00000390981 114 ntBASIC1.11□□□□□ -2.23
RNF220Q5VTB9 MIR1827-201ENST00000408549 66 ntBASIC1.11□□□□□ -2.23
RNF220Q5VTB9 RNU7-113P-201ENST00000459273 62 ntBASIC1.11□□□□□ -2.23
RNF220Q5VTB9 AC113410.1-201ENST00000505029 247 ntBASIC1.11□□□□□ -2.23
RNF220Q5VTB9 RNA5SP255-201ENST00000516370 107 ntBASIC1.11□□□□□ -2.23
RNF220Q5VTB9 Y_RNA.676-201ENST00000516393 96 ntBASIC1.11□□□□□ -2.23
RNF220Q5VTB9 RNU6-1258P-201ENST00000516911 111 ntBASIC1.11□□□□□ -2.23
RNF220Q5VTB9 MIR3121-201ENST00000579680 77 ntBASIC1.11□□□□□ -2.23
RNF220Q5VTB9 AC021443.1-201ENST00000604478 211 ntBASIC1.11□□□□□ -2.23
RNF220Q5VTB9 snoU13.31-201ENST00000607291 104 ntBASIC1.11□□□□□ -2.23
RNF220Q5VTB9 uc_338.6-201ENST00000613544 171 ntBASIC1.11□□□□□ -2.23
RNF220Q5VTB9 Y_RNA.343-201ENST00000365354 112 ntBASIC1.1□□□□□ -2.23
RNF220Q5VTB9 SNORA22-201ENST00000383907 134 ntBASIC1.1□□□□□ -2.23
RNF220Q5VTB9 SNORA22C-201ENST00000384614 134 ntBASIC1.1□□□□□ -2.23
RNF220Q5VTB9 MIR100-201ENST00000385259 80 ntBASIC1.1□□□□□ -2.23
RNF220Q5VTB9 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.1□□□□□ -2.23
RNF220Q5VTB9 AC025627.3-201ENST00000582078 182 ntBASIC1.1□□□□□ -2.23
RNF220Q5VTB9 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.1□□□□□ -2.23
RNF220Q5VTB9 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
RNF220Q5VTB9 SNORA7.1-201ENST00000363750 139 ntBASIC1.09□□□□□ -2.23
RNF220Q5VTB9 Y_RNA.171-201ENST00000363760 102 ntBASIC1.09□□□□□ -2.23
RNF220Q5VTB9 RNU7-164P-201ENST00000459221 62 ntBASIC1.09□□□□□ -2.23
RNF220Q5VTB9 MIR4498-201ENST00000577599 66 ntBASIC1.09□□□□□ -2.23
RNF220Q5VTB9 MIR4771-2-201ENST00000577758 74 ntBASIC1.09□□□□□ -2.23
RNF220Q5VTB9 MIR4771-1-201ENST00000582617 74 ntBASIC1.09□□□□□ -2.23
RNF220Q5VTB9 AL662814.1-201ENST00000617364 121 ntBASIC1.09□□□□□ -2.23
RNF220Q5VTB9 MIR337-201ENST00000362281 93 ntBASIC1.08□□□□□ -2.24
RNF220Q5VTB9 MIR30D-201ENST00000362283 70 ntBASIC1.08□□□□□ -2.24
RNF220Q5VTB9 SNORD115-2-201ENST00000362842 82 ntBASIC1.08□□□□□ -2.24
RNF220Q5VTB9 SNORD115-20-201ENST00000365099 82 ntBASIC1.08□□□□□ -2.24
RNF220Q5VTB9 SNORA18-201ENST00000384416 132 ntBASIC1.08□□□□□ -2.24
RNF220Q5VTB9 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.08□□□□□ -2.24
RNF220Q5VTB9 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.08□□□□□ -2.24
RNF220Q5VTB9 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.07□□□□□ -2.24
RNF220Q5VTB9 Y_RNA.366-201ENST00000365540 102 ntBASIC1.07□□□□□ -2.24
RNF220Q5VTB9 Y_RNA.506-201ENST00000384494 102 ntBASIC1.07□□□□□ -2.24
RNF220Q5VTB9 Y_RNA.531-201ENST00000384589 121 ntBASIC1.07□□□□□ -2.24
RNF220Q5VTB9 AL512326.2-201ENST00000426359 151 ntBASIC1.07□□□□□ -2.24
RNF220Q5VTB9 RNU6-977P-201ENST00000516411 103 ntBASIC1.07□□□□□ -2.24
RNF220Q5VTB9 RNU2-35P-201ENST00000516446 142 ntBASIC1.07□□□□□ -2.24
RNF220Q5VTB9 AC004812.1-201ENST00000540773 146 ntBASIC1.07□□□□□ -2.24
RNF220Q5VTB9 SNORA4-201ENST00000584302 138 ntBASIC1.07□□□□□ -2.24
RNF220Q5VTB9 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.07□□□□□ -2.24
RNF220Q5VTB9 AL157834.3-201ENST00000615543 103 ntBASIC1.07□□□□□ -2.24
RNF220Q5VTB9 AL137067.1-201ENST00000615933 120 ntBASIC1.07□□□□□ -2.24
RNF220Q5VTB9 AL353770.2-201ENST00000620024 78 ntBASIC1.07□□□□□ -2.24
RNF220Q5VTB9 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
RNF220Q5VTB9 AC023934.1-201ENST00000574529 2389 ntBASIC1.06□□□□□ -2.24
RNF220Q5VTB9 Y_RNA.4-201ENST00000362333 112 ntBASIC1.06□□□□□ -2.24
RNF220Q5VTB9 RNU6-1062P-201ENST00000383908 107 ntBASIC1.06□□□□□ -2.24
RNF220Q5VTB9 RNU6-1086P-201ENST00000410930 100 ntBASIC1.06□□□□□ -2.24
RNF220Q5VTB9 AP1B1P2-201ENST00000416196 106 ntBASIC1.06□□□□□ -2.24
RNF220Q5VTB9 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.06□□□□□ -2.24
RNF220Q5VTB9 TRMT112P2-201ENST00000512910 132 ntBASIC1.06□□□□□ -2.24
RNF220Q5VTB9 RNU6-426P-201ENST00000516464 97 ntBASIC1.06□□□□□ -2.24
RNF220Q5VTB9 RNA5SP33-201ENST00000516687 98 ntBASIC1.06□□□□□ -2.24
RNF220Q5VTB9 AC141846.1-201ENST00000568348 142 ntBASIC1.06□□□□□ -2.24
RNF220Q5VTB9 AC103810.9-201ENST00000606688 112 ntBASIC1.06□□□□□ -2.24
RNF220Q5VTB9 U7.2-201ENST00000607576 63 ntBASIC1.06□□□□□ -2.24
RNF220Q5VTB9 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
RNF220Q5VTB9 RNU6-369P-201ENST00000362515 102 ntBASIC1.05□□□□□ -2.24
RNF220Q5VTB9 Y_RNA.470-201ENST00000384307 117 ntBASIC1.05□□□□□ -2.24
RNF220Q5VTB9 RNU6-342P-201ENST00000384521 104 ntBASIC1.05□□□□□ -2.24
RNF220Q5VTB9 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.05□□□□□ -2.24
RNF220Q5VTB9 RPL39P25-201ENST00000449384 154 ntBASIC1.05□□□□□ -2.24
RNF220Q5VTB9 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.05□□□□□ -2.24
RNF220Q5VTB9 RNU7-185P-201ENST00000459215 60 ntBASIC1.05□□□□□ -2.24
RNF220Q5VTB9 RNU6-346P-201ENST00000516288 111 ntBASIC1.05□□□□□ -2.24
RNF220Q5VTB9 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.05□□□□□ -2.24
RNF220Q5VTB9 AC091895.1-201ENST00000624494 256 ntBASIC1.05□□□□□ -2.24
RNF220Q5VTB9 Y_RNA.114-201ENST00000363265 113 ntBASIC1.04□□□□□ -2.24
RNF220Q5VTB9 RNU6-1187P-201ENST00000364771 110 ntBASIC1.04□□□□□ -2.24
RNF220Q5VTB9 Y_RNA.298-201ENST00000364960 107 ntBASIC1.04□□□□□ -2.24
RNF220Q5VTB9 RNU1-36P-201ENST00000365130 165 ntBASIC1.04□□□□□ -2.24
RNF220Q5VTB9 MIR1257-201ENST00000408490 117 ntBASIC1.04□□□□□ -2.24
RNF220Q5VTB9 AC015818.7-201ENST00000428754 109 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 219.3 ms