Protein–RNA interactions for Protein: Q567U6

CCDC93, Coiled-coil domain-containing protein 93, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93Q567U6 AC138907.4-201ENST00000570107 226 ntBASIC1.55□□□□□ -2.16
CCDC93Q567U6 MIR8055-201ENST00000610739 97 ntBASIC1.55□□□□□ -2.16
CCDC93Q567U6 7SK.8-201ENST00000612110 250 ntBASIC1.55□□□□□ -2.16
CCDC93Q567U6 7SK.11-201ENST00000615477 250 ntBASIC1.55□□□□□ -2.16
CCDC93Q567U6 7SK.13-201ENST00000622040 250 ntBASIC1.55□□□□□ -2.16
CCDC93Q567U6 MIR6767-201ENST00000637302 66 ntBASIC1.55□□□□□ -2.16
CCDC93Q567U6 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CCDC93Q567U6 Y_RNA.366-201ENST00000365540 102 ntBASIC1.54□□□□□ -2.16
CCDC93Q567U6 RNU6-1117P-201ENST00000384525 104 ntBASIC1.54□□□□□ -2.16
CCDC93Q567U6 SNORA26.6-201ENST00000391256 115 ntBASIC1.54□□□□□ -2.16
CCDC93Q567U6 RNU6-1190P-201ENST00000410811 104 ntBASIC1.54□□□□□ -2.16
CCDC93Q567U6 AL606753.1-201ENST00000427435 87 ntBASIC1.54□□□□□ -2.16
CCDC93Q567U6 RNU6-1234P-201ENST00000516877 103 ntBASIC1.54□□□□□ -2.16
CCDC93Q567U6 MIR3152-201ENST00000579801 74 ntBASIC1.54□□□□□ -2.16
CCDC93Q567U6 AL137067.1-201ENST00000615933 120 ntBASIC1.54□□□□□ -2.16
CCDC93Q567U6 MIR6717-201ENST00000622747 73 ntBASIC1.54□□□□□ -2.16
CCDC93Q567U6 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
CCDC93Q567U6 SNORD116-14-201ENST00000383894 92 ntBASIC1.53□□□□□ -2.16
CCDC93Q567U6 SNORD116-17-201ENST00000383929 92 ntBASIC1.53□□□□□ -2.16
CCDC93Q567U6 SNORD116-15-201ENST00000384445 92 ntBASIC1.53□□□□□ -2.16
CCDC93Q567U6 SNORD116-19-201ENST00000384729 92 ntBASIC1.53□□□□□ -2.16
CCDC93Q567U6 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.53□□□□□ -2.16
CCDC93Q567U6 HMGN1P33-201ENST00000432945 451 ntBASIC1.53□□□□□ -2.16
CCDC93Q567U6 CYP3A52P-201ENST00000563326 91 ntBASIC1.53□□□□□ -2.16
CCDC93Q567U6 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.53□□□□□ -2.16
CCDC93Q567U6 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.52□□□□□ -2.17
CCDC93Q567U6 SNORA25.3-201ENST00000363205 127 ntBASIC1.52□□□□□ -2.17
CCDC93Q567U6 SNORA1.1-201ENST00000364671 133 ntBASIC1.52□□□□□ -2.17
CCDC93Q567U6 RNU6-342P-201ENST00000384521 104 ntBASIC1.52□□□□□ -2.17
CCDC93Q567U6 RNU6-939P-201ENST00000384634 107 ntBASIC1.52□□□□□ -2.17
CCDC93Q567U6 MIR222-201ENST00000384992 110 ntBASIC1.52□□□□□ -2.17
CCDC93Q567U6 Y_RNA.617-201ENST00000410920 90 ntBASIC1.52□□□□□ -2.17
CCDC93Q567U6 RN7SKP19-201ENST00000516016 252 ntBASIC1.52□□□□□ -2.17
CCDC93Q567U6 IGKV1-22-201ENST00000524313 326 ntBASIC1.52□□□□□ -2.17
CCDC93Q567U6 AC021443.1-201ENST00000604478 211 ntBASIC1.52□□□□□ -2.17
CCDC93Q567U6 U2.22-201ENST00000636441 106 ntBASIC1.52□□□□□ -2.17
CCDC93Q567U6 Z97988.1-201ENST00000637697 135 ntBASIC1.52□□□□□ -2.17
CCDC93Q567U6 Y_RNA.127-201ENST00000363386 109 ntBASIC1.51□□□□□ -2.17
CCDC93Q567U6 Y_RNA.430-201ENST00000384081 110 ntBASIC1.51□□□□□ -2.17
CCDC93Q567U6 MIR598-201ENST00000384868 97 ntBASIC1.51□□□□□ -2.17
CCDC93Q567U6 MIR618-201ENST00000385287 98 ntBASIC1.51□□□□□ -2.17
CCDC93Q567U6 MIR548J-201ENST00000408833 112 ntBASIC1.51□□□□□ -2.17
CCDC93Q567U6 AC008267.6-201ENST00000441664 139 ntBASIC1.51□□□□□ -2.17
CCDC93Q567U6 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.51□□□□□ -2.17
CCDC93Q567U6 RNU7-107P-201ENST00000459121 61 ntBASIC1.51□□□□□ -2.17
CCDC93Q567U6 RNU6-62P-201ENST00000516526 102 ntBASIC1.51□□□□□ -2.17
CCDC93Q567U6 AP003716.2-201ENST00000528260 108 ntBASIC1.51□□□□□ -2.17
CCDC93Q567U6 AC019288.1-201ENST00000557918 224 ntBASIC1.51□□□□□ -2.17
CCDC93Q567U6 MIR4305-201ENST00000583252 102 ntBASIC1.51□□□□□ -2.17
CCDC93Q567U6 RNA5SP264-201ENST00000363115 107 ntBASIC1.5□□□□□ -2.17
CCDC93Q567U6 RNU6-22P-201ENST00000384355 107 ntBASIC1.5□□□□□ -2.17
CCDC93Q567U6 MIR758-201ENST00000390227 88 ntBASIC1.5□□□□□ -2.17
CCDC93Q567U6 MIR1302-7-201ENST00000408841 72 ntBASIC1.5□□□□□ -2.17
CCDC93Q567U6 RNA5SP144-201ENST00000410846 116 ntBASIC1.5□□□□□ -2.17
CCDC93Q567U6 RNU6-1054P-201ENST00000411293 104 ntBASIC1.5□□□□□ -2.17
CCDC93Q567U6 RPS3AP1-201ENST00000413190 320 ntBASIC1.5□□□□□ -2.17
CCDC93Q567U6 RNU6-893P-201ENST00000458841 100 ntBASIC1.5□□□□□ -2.17
CCDC93Q567U6 RNU6-772P-201ENST00000516042 105 ntBASIC1.5□□□□□ -2.17
CCDC93Q567U6 RN7SKP179-201ENST00000516126 217 ntBASIC1.5□□□□□ -2.17
CCDC93Q567U6 MIR6841-201ENST00000637129 72 ntBASIC1.5□□□□□ -2.17
CCDC93Q567U6 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
CCDC93Q567U6 MIR103A2-201ENST00000362154 78 ntBASIC1.49□□□□□ -2.17
CCDC93Q567U6 SNORA22.1-201ENST00000362701 134 ntBASIC1.49□□□□□ -2.17
CCDC93Q567U6 SNORD58C-201ENST00000365223 64 ntBASIC1.49□□□□□ -2.17
CCDC93Q567U6 AL022718.1-201ENST00000412004 84 ntBASIC1.49□□□□□ -2.17
CCDC93Q567U6 POLR2J4-204ENST00000418424 324 ntBASIC1.49□□□□□ -2.17
CCDC93Q567U6 AC090844.1-201ENST00000422019 156 ntBASIC1.49□□□□□ -2.17
CCDC93Q567U6 AC245047.7-201ENST00000440265 293 ntBASIC1.49□□□□□ -2.17
CCDC93Q567U6 RNU7-164P-201ENST00000459221 62 ntBASIC1.49□□□□□ -2.17
CCDC93Q567U6 RNU6-1333P-201ENST00000516162 93 ntBASIC1.49□□□□□ -2.17
CCDC93Q567U6 RNU6-781P-201ENST00000516377 101 ntBASIC1.49□□□□□ -2.17
CCDC93Q567U6 RNU6-659P-201ENST00000516454 104 ntBASIC1.49□□□□□ -2.17
CCDC93Q567U6 RNU6-1061P-201ENST00000516530 99 ntBASIC1.49□□□□□ -2.17
CCDC93Q567U6 AL365222.1-201ENST00000614661 98 ntBASIC1.49□□□□□ -2.17
CCDC93Q567U6 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
CCDC93Q567U6 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.48□□□□□ -2.17
CCDC93Q567U6 RNA5SP325-201ENST00000363756 130 ntBASIC1.48□□□□□ -2.17
CCDC93Q567U6 Y_RNA.298-201ENST00000364960 107 ntBASIC1.48□□□□□ -2.17
CCDC93Q567U6 MIR1185-1-201ENST00000408598 86 ntBASIC1.48□□□□□ -2.17
CCDC93Q567U6 AC048334.1-201ENST00000477975 159 ntBASIC1.48□□□□□ -2.17
CCDC93Q567U6 SNORA31.2-201ENST00000516019 134 ntBASIC1.48□□□□□ -2.17
CCDC93Q567U6 RNU6-479P-201ENST00000516348 105 ntBASIC1.48□□□□□ -2.17
CCDC93Q567U6 RNU2-35P-201ENST00000516446 142 ntBASIC1.48□□□□□ -2.17
CCDC93Q567U6 RNY4P20-201ENST00000516678 93 ntBASIC1.48□□□□□ -2.17
CCDC93Q567U6 PRELID3BP2-201ENST00000605362 201 ntBASIC1.48□□□□□ -2.17
CCDC93Q567U6 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.48□□□□□ -2.17
CCDC93Q567U6 RNU6-396P-201ENST00000365369 105 ntBASIC1.47□□□□□ -2.17
CCDC93Q567U6 Y_RNA.525-201ENST00000384570 113 ntBASIC1.47□□□□□ -2.17
CCDC93Q567U6 SNORD38B-201ENST00000384690 67 ntBASIC1.47□□□□□ -2.17
CCDC93Q567U6 MIR1263-201ENST00000408324 86 ntBASIC1.47□□□□□ -2.17
CCDC93Q567U6 RNA5SP136-201ENST00000410906 107 ntBASIC1.47□□□□□ -2.17
CCDC93Q567U6 RNU6-602P-201ENST00000411155 105 ntBASIC1.47□□□□□ -2.17
CCDC93Q567U6 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.47□□□□□ -2.17
CCDC93Q567U6 RNU7-123P-201ENST00000515911 60 ntBASIC1.47□□□□□ -2.17
CCDC93Q567U6 RNU11-2P-201ENST00000516898 142 ntBASIC1.47□□□□□ -2.17
CCDC93Q567U6 Y_RNA.712-201ENST00000517011 92 ntBASIC1.47□□□□□ -2.17
CCDC93Q567U6 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.47□□□□□ -2.17
CCDC93Q567U6 SNORD38B-202ENST00000625943 69 ntBASIC1.47□□□□□ -2.17
CCDC93Q567U6 Y_RNA.36-201ENST00000362602 112 ntBASIC1.46□□□□□ -2.18
CCDC93Q567U6 Y_RNA.261-201ENST00000364631 102 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 271.9 ms