Protein–RNA interactions for Protein: Q12981

BNIP1, Vesicle transport protein SEC20, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP1Q12981 MIR4308-201ENST00000580634 81 ntBASIC0.33□□□□□ -2.36
BNIP1Q12981 MIR378D2-201ENST00000580636 98 ntBASIC0.33□□□□□ -2.36
BNIP1Q12981 SNORA4-201ENST00000584302 138 ntBASIC0.33□□□□□ -2.36
BNIP1Q12981 AC021613.1-201ENST00000623880 111 ntBASIC0.33□□□□□ -2.36
BNIP1Q12981 SNORD27-201ENST00000363981 72 ntBASIC0.32□□□□□ -2.36
BNIP1Q12981 RNU6-923P-201ENST00000364753 107 ntBASIC0.32□□□□□ -2.36
BNIP1Q12981 Y_RNA.454-201ENST00000384224 113 ntBASIC0.32□□□□□ -2.36
BNIP1Q12981 Y_RNA.477-201ENST00000384352 108 ntBASIC0.32□□□□□ -2.36
BNIP1Q12981 RNU6-342P-201ENST00000384521 104 ntBASIC0.32□□□□□ -2.36
BNIP1Q12981 Y_RNA.562-201ENST00000384695 113 ntBASIC0.32□□□□□ -2.36
BNIP1Q12981 RNA5SP134-201ENST00000516492 96 ntBASIC0.32□□□□□ -2.36
BNIP1Q12981 SNORD116-25-201ENST00000516517 92 ntBASIC0.32□□□□□ -2.36
BNIP1Q12981 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.32□□□□□ -2.36
BNIP1Q12981 MIR6513-201ENST00000621188 64 ntBASIC0.32□□□□□ -2.36
BNIP1Q12981 AC090625.1-201ENST00000357130 210 ntBASIC0.31□□□□□ -2.36
BNIP1Q12981 SNORA22.1-201ENST00000362701 134 ntBASIC0.31□□□□□ -2.36
BNIP1Q12981 Y_RNA.149-201ENST00000363558 117 ntBASIC0.31□□□□□ -2.36
BNIP1Q12981 RNU4-16P-201ENST00000364737 141 ntBASIC0.31□□□□□ -2.36
BNIP1Q12981 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.31□□□□□ -2.36
BNIP1Q12981 RNA5SP237-201ENST00000410414 113 ntBASIC0.31□□□□□ -2.36
BNIP1Q12981 RNA5SP261-201ENST00000410536 106 ntBASIC0.31□□□□□ -2.36
BNIP1Q12981 RNU6-1132P-201ENST00000459214 107 ntBASIC0.31□□□□□ -2.36
BNIP1Q12981 SNORA25.12-201ENST00000516202 82 ntBASIC0.31□□□□□ -2.36
BNIP1Q12981 AC133485.4-201ENST00000561835 220 ntBASIC0.31□□□□□ -2.36
BNIP1Q12981 AC141846.1-201ENST00000568348 142 ntBASIC0.31□□□□□ -2.36
BNIP1Q12981 AL360085.1-201ENST00000604713 532 ntBASIC0.31□□□□□ -2.36
BNIP1Q12981 SNORA25.18-201ENST00000607153 114 ntBASIC0.31□□□□□ -2.36
BNIP1Q12981 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.31□□□□□ -2.36
BNIP1Q12981 Y_RNA.13-201ENST00000362403 112 ntBASIC0.3□□□□□ -2.36
BNIP1Q12981 Y_RNA.65-201ENST00000362846 100 ntBASIC0.3□□□□□ -2.36
BNIP1Q12981 SNORD44.1-201ENST00000363202 61 ntBASIC0.3□□□□□ -2.36
BNIP1Q12981 RNU6-694P-201ENST00000364071 147 ntBASIC0.3□□□□□ -2.36
BNIP1Q12981 Y_RNA.238-201ENST00000364441 102 ntBASIC0.3□□□□□ -2.36
BNIP1Q12981 Y_RNA.288-201ENST00000364854 92 ntBASIC0.3□□□□□ -2.36
BNIP1Q12981 RNU1-133P-201ENST00000364867 167 ntBASIC0.3□□□□□ -2.36
BNIP1Q12981 RNU6-1336P-201ENST00000383886 109 ntBASIC0.3□□□□□ -2.36
BNIP1Q12981 MIR518A1-201ENST00000385068 85 ntBASIC0.3□□□□□ -2.36
BNIP1Q12981 MIR644A-201ENST00000385262 94 ntBASIC0.3□□□□□ -2.36
BNIP1Q12981 Y_RNA.588-201ENST00000391254 102 ntBASIC0.3□□□□□ -2.36
BNIP1Q12981 Y_RNA.673-201ENST00000516306 88 ntBASIC0.3□□□□□ -2.36
BNIP1Q12981 RNU6-1149P-201ENST00000516810 97 ntBASIC0.3□□□□□ -2.36
BNIP1Q12981 RNU6-1258P-201ENST00000516911 111 ntBASIC0.3□□□□□ -2.36
BNIP1Q12981 MIR3152-201ENST00000579801 74 ntBASIC0.3□□□□□ -2.36
BNIP1Q12981 AC243829.6-201ENST00000612652 106 ntBASIC0.3□□□□□ -2.36
BNIP1Q12981 SNORA36.1-201ENST00000363424 132 ntBASIC0.29□□□□□ -2.36
BNIP1Q12981 Y_RNA.133-201ENST00000363428 110 ntBASIC0.29□□□□□ -2.36
BNIP1Q12981 RNA5SP117-201ENST00000365294 118 ntBASIC0.29□□□□□ -2.36
BNIP1Q12981 RNU6-42P-201ENST00000384165 107 ntBASIC0.29□□□□□ -2.36
BNIP1Q12981 MIR1287-201ENST00000408492 90 ntBASIC0.29□□□□□ -2.36
BNIP1Q12981 MIR548H3-201ENST00000408771 118 ntBASIC0.29□□□□□ -2.36
BNIP1Q12981 Y_RNA.797-201ENST00000515977 94 ntBASIC0.29□□□□□ -2.36
BNIP1Q12981 MIR4491-201ENST00000581087 68 ntBASIC0.29□□□□□ -2.36
BNIP1Q12981 RNU6-403P-201ENST00000363163 104 ntBASIC0.28□□□□□ -2.36
BNIP1Q12981 SNORA8.2-201ENST00000384372 139 ntBASIC0.28□□□□□ -2.36
BNIP1Q12981 SNORA20-201ENST00000384662 132 ntBASIC0.28□□□□□ -2.36
BNIP1Q12981 SNORA40.8-201ENST00000411034 126 ntBASIC0.28□□□□□ -2.36
BNIP1Q12981 RNA5SP127-201ENST00000411051 133 ntBASIC0.28□□□□□ -2.36
BNIP1Q12981 Y_RNA.626-201ENST00000411288 95 ntBASIC0.28□□□□□ -2.36
BNIP1Q12981 Y_RNA.680-201ENST00000516441 93 ntBASIC0.28□□□□□ -2.36
BNIP1Q12981 MRPS18CP4-201ENST00000535821 231 ntBASIC0.28□□□□□ -2.36
BNIP1Q12981 SNORD118-201ENST00000363593 134 ntBASIC0.27□□□□□ -2.37
BNIP1Q12981 Y_RNA.182-201ENST00000363880 111 ntBASIC0.27□□□□□ -2.37
BNIP1Q12981 RNU6-643P-201ENST00000384018 107 ntBASIC0.27□□□□□ -2.37
BNIP1Q12981 SNORA18-201ENST00000384416 132 ntBASIC0.27□□□□□ -2.37
BNIP1Q12981 Y_RNA.567-201ENST00000384736 106 ntBASIC0.27□□□□□ -2.37
BNIP1Q12981 Y_RNA.571-201ENST00000384753 98 ntBASIC0.27□□□□□ -2.37
BNIP1Q12981 MIR216A-201ENST00000385063 110 ntBASIC0.27□□□□□ -2.37
BNIP1Q12981 MIR624-201ENST00000385217 97 ntBASIC0.27□□□□□ -2.37
BNIP1Q12981 SNORD58.1-201ENST00000391313 66 ntBASIC0.27□□□□□ -2.37
BNIP1Q12981 MTCYBP9-201ENST00000431021 303 ntBASIC0.27□□□□□ -2.37
BNIP1Q12981 RPL39P25-201ENST00000449384 154 ntBASIC0.27□□□□□ -2.37
BNIP1Q12981 SNRPGP12-201ENST00000449481 213 ntBASIC0.27□□□□□ -2.37
BNIP1Q12981 AC108740.1-201ENST00000498629 225 ntBASIC0.27□□□□□ -2.37
BNIP1Q12981 Y_RNA.668-201ENST00000516233 93 ntBASIC0.27□□□□□ -2.37
BNIP1Q12981 RNU7-70P-201ENST00000516941 66 ntBASIC0.27□□□□□ -2.37
BNIP1Q12981 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
BNIP1Q12981 MIR6082-201ENST00000613604 109 ntBASIC0.27□□□□□ -2.37
BNIP1Q12981 AL589743.1-201ENST00000551932 2712 ntBASIC0.27□□□□□ -2.37
BNIP1Q12981 MTND5P32-201ENST00000560711 1802 ntBASIC0.27□□□□□ -2.37
BNIP1Q12981 Y_RNA.171-201ENST00000363760 102 ntBASIC0.26□□□□□ -2.37
BNIP1Q12981 Y_RNA.226-201ENST00000364337 114 ntBASIC0.26□□□□□ -2.37
BNIP1Q12981 RNY1P13-201ENST00000365030 105 ntBASIC0.26□□□□□ -2.37
BNIP1Q12981 RNU6-1011P-201ENST00000384668 107 ntBASIC0.26□□□□□ -2.37
BNIP1Q12981 AC022523.2-201ENST00000561045 150 ntBASIC0.26□□□□□ -2.37
BNIP1Q12981 Y_RNA.757-201ENST00000578934 114 ntBASIC0.26□□□□□ -2.37
BNIP1Q12981 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.25□□□□□ -2.37
BNIP1Q12981 Y_RNA.20-201ENST00000362479 113 ntBASIC0.25□□□□□ -2.37
BNIP1Q12981 Y_RNA.32-201ENST00000362589 110 ntBASIC0.25□□□□□ -2.37
BNIP1Q12981 Y_RNA.121-201ENST00000363309 113 ntBASIC0.25□□□□□ -2.37
BNIP1Q12981 Y_RNA.412-201ENST00000384001 104 ntBASIC0.25□□□□□ -2.37
BNIP1Q12981 RNU6-949P-201ENST00000384040 107 ntBASIC0.25□□□□□ -2.37
BNIP1Q12981 SNORA31.14-201ENST00000516728 116 ntBASIC0.25□□□□□ -2.37
BNIP1Q12981 MIR3128-201ENST00000581957 66 ntBASIC0.25□□□□□ -2.37
BNIP1Q12981 MIR5093-201ENST00000583199 100 ntBASIC0.25□□□□□ -2.37
BNIP1Q12981 AC078938.1-201ENST00000620993 318 ntBASIC0.25□□□□□ -2.37
BNIP1Q12981 uc_338.16-201ENST00000621804 95 ntBASIC0.25□□□□□ -2.37
BNIP1Q12981 U6.106-201ENST00000636360 105 ntBASIC0.25□□□□□ -2.37
BNIP1Q12981 VTRNA1-3-201ENST00000365645 89 ntBASIC0.24□□□□□ -2.37
BNIP1Q12981 MIR936-201ENST00000401264 98 ntBASIC0.24□□□□□ -2.37
BNIP1Q12981 SNORD71-201ENST00000411292 86 ntBASIC0.24□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 222.2 ms