Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 RNU6-813P-201ENST00000384691 107 ntBASIC2.24□□□□□ -2.05
PCDH1Q08174 RNU6-1237P-201ENST00000384777 107 ntBASIC2.24□□□□□ -2.05
PCDH1Q08174 SNORD41-201ENST00000386967 70 ntBASIC2.24□□□□□ -2.05
PCDH1Q08174 AL445685.2-201ENST00000422551 342 ntBASIC2.24□□□□□ -2.05
PCDH1Q08174 MIR6766-201ENST00000622641 72 ntBASIC2.24□□□□□ -2.05
PCDH1Q08174 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
PCDH1Q08174 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
PCDH1Q08174 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
PCDH1Q08174 SNORA70B-201ENST00000384210 135 ntBASIC2.23□□□□□ -2.05
PCDH1Q08174 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
PCDH1Q08174 RNU6-1321P-201ENST00000390905 107 ntBASIC2.23□□□□□ -2.05
PCDH1Q08174 RNU6-447P-201ENST00000410293 104 ntBASIC2.23□□□□□ -2.05
PCDH1Q08174 RNU6-1118P-201ENST00000410382 104 ntBASIC2.23□□□□□ -2.05
PCDH1Q08174 RNU6-1076P-201ENST00000410397 104 ntBASIC2.23□□□□□ -2.05
PCDH1Q08174 RNU6-355P-201ENST00000410427 104 ntBASIC2.23□□□□□ -2.05
PCDH1Q08174 RNU6-791P-201ENST00000410467 104 ntBASIC2.23□□□□□ -2.05
PCDH1Q08174 RNU6-705P-201ENST00000410601 104 ntBASIC2.23□□□□□ -2.05
PCDH1Q08174 RNU6-1100P-201ENST00000410691 104 ntBASIC2.23□□□□□ -2.05
PCDH1Q08174 RNU6-860P-201ENST00000410860 104 ntBASIC2.23□□□□□ -2.05
PCDH1Q08174 RNU6-1217P-201ENST00000411276 104 ntBASIC2.23□□□□□ -2.05
PCDH1Q08174 RNU6-785P-201ENST00000411324 104 ntBASIC2.23□□□□□ -2.05
PCDH1Q08174 RNU6-922P-201ENST00000516753 99 ntBASIC2.23□□□□□ -2.05
PCDH1Q08174 AC046143.2-201ENST00000609789 160 ntBASIC2.23□□□□□ -2.05
PCDH1Q08174 U6.90-201ENST00000614007 104 ntBASIC2.23□□□□□ -2.05
PCDH1Q08174 AC105081.1-201ENST00000617727 106 ntBASIC2.23□□□□□ -2.05
PCDH1Q08174 U6.70-201ENST00000620287 104 ntBASIC2.23□□□□□ -2.05
PCDH1Q08174 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
PCDH1Q08174 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
PCDH1Q08174 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.22□□□□□ -2.05
PCDH1Q08174 RNY1P1-201ENST00000364372 112 ntBASIC2.22□□□□□ -2.05
PCDH1Q08174 RNU6-1163P-201ENST00000364516 107 ntBASIC2.22□□□□□ -2.05
PCDH1Q08174 U8.15-201ENST00000390947 134 ntBASIC2.22□□□□□ -2.05
PCDH1Q08174 IGLL4P-201ENST00000614590 133 ntBASIC2.22□□□□□ -2.05
PCDH1Q08174 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
PCDH1Q08174 SNORD116-10-201ENST00000363791 102 ntBASIC2.21□□□□□ -2.06
PCDH1Q08174 SNORA16B-201ENST00000364674 135 ntBASIC2.21□□□□□ -2.06
PCDH1Q08174 RNY1P13-201ENST00000365030 105 ntBASIC2.21□□□□□ -2.06
PCDH1Q08174 SNORD116-22-201ENST00000384430 92 ntBASIC2.21□□□□□ -2.06
PCDH1Q08174 RNA5SP237-201ENST00000410414 113 ntBASIC2.21□□□□□ -2.06
PCDH1Q08174 RNU7-48P-201ENST00000458875 63 ntBASIC2.21□□□□□ -2.06
PCDH1Q08174 AL357312.1-201ENST00000603879 298 ntBASIC2.21□□□□□ -2.06
PCDH1Q08174 RNU6-86P-201ENST00000606534 107 ntBASIC2.21□□□□□ -2.06
PCDH1Q08174 AL773524.1-201ENST00000614065 229 ntBASIC2.21□□□□□ -2.06
PCDH1Q08174 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
PCDH1Q08174 SNORD58A-201ENST00000383875 65 ntBASIC2.2□□□□□ -2.06
PCDH1Q08174 AC244636.1-201ENST00000421152 228 ntBASIC2.2□□□□□ -2.06
PCDH1Q08174 RNA5SP445-201ENST00000515889 115 ntBASIC2.2□□□□□ -2.06
PCDH1Q08174 AC141846.1-201ENST00000568348 142 ntBASIC2.2□□□□□ -2.06
PCDH1Q08174 MIR3192-201ENST00000584920 77 ntBASIC2.2□□□□□ -2.06
PCDH1Q08174 AC103810.7-201ENST00000607821 91 ntBASIC2.2□□□□□ -2.06
PCDH1Q08174 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.2□□□□□ -2.06
PCDH1Q08174 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.2□□□□□ -2.06
PCDH1Q08174 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
PCDH1Q08174 Y_RNA.98-201ENST00000363109 102 ntBASIC2.19□□□□□ -2.06
PCDH1Q08174 RNU6-675P-201ENST00000384236 104 ntBASIC2.19□□□□□ -2.06
PCDH1Q08174 SNORA48.3-201ENST00000391081 134 ntBASIC2.19□□□□□ -2.06
PCDH1Q08174 MIR548G-201ENST00000408442 89 ntBASIC2.19□□□□□ -2.06
PCDH1Q08174 AC022137.1-201ENST00000483735 151 ntBASIC2.19□□□□□ -2.06
PCDH1Q08174 AC015688.6-201ENST00000577737 104 ntBASIC2.19□□□□□ -2.06
PCDH1Q08174 SNORD53-201ENST00000579969 78 ntBASIC2.19□□□□□ -2.06
PCDH1Q08174 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.19□□□□□ -2.06
PCDH1Q08174 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.19□□□□□ -2.06
PCDH1Q08174 SEPT14P17-201ENST00000617978 177 ntBASIC2.19□□□□□ -2.06
PCDH1Q08174 U8.2-201ENST00000363156 134 ntBASIC2.18□□□□□ -2.06
PCDH1Q08174 Y_RNA.219-201ENST00000364232 113 ntBASIC2.18□□□□□ -2.06
PCDH1Q08174 SNORD38.2-201ENST00000384470 69 ntBASIC2.18□□□□□ -2.06
PCDH1Q08174 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
PCDH1Q08174 RNU6-1275P-201ENST00000391087 107 ntBASIC2.18□□□□□ -2.06
PCDH1Q08174 RNU6-402P-201ENST00000410678 103 ntBASIC2.18□□□□□ -2.06
PCDH1Q08174 AC104435.1-201ENST00000483483 166 ntBASIC2.18□□□□□ -2.06
PCDH1Q08174 RNA5SP200-201ENST00000516360 103 ntBASIC2.18□□□□□ -2.06
PCDH1Q08174 SNORA77B-201ENST00000578179 125 ntBASIC2.18□□□□□ -2.06
PCDH1Q08174 PRELID3BP2-201ENST00000605362 201 ntBASIC2.18□□□□□ -2.06
PCDH1Q08174 RNU6-90P-201ENST00000606352 106 ntBASIC2.18□□□□□ -2.06
PCDH1Q08174 AL096861.1-201ENST00000610899 123 ntBASIC2.18□□□□□ -2.06
PCDH1Q08174 AL662814.1-201ENST00000617364 121 ntBASIC2.18□□□□□ -2.06
PCDH1Q08174 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.17□□□□□ -2.06
PCDH1Q08174 AL596028.1-201ENST00000326971 197 ntBASIC2.17□□□□□ -2.06
PCDH1Q08174 AC244023.1-201ENST00000426884 112 ntBASIC2.17□□□□□ -2.06
PCDH1Q08174 AC027119.1-201ENST00000440877 241 ntBASIC2.17□□□□□ -2.06
PCDH1Q08174 HSPE1P24-201ENST00000450782 238 ntBASIC2.17□□□□□ -2.06
PCDH1Q08174 RNU6-250P-201ENST00000516958 103 ntBASIC2.17□□□□□ -2.06
PCDH1Q08174 AC242498.1-201ENST00000604134 111 ntBASIC2.17□□□□□ -2.06
PCDH1Q08174 MIR7843-201ENST00000622274 79 ntBASIC2.17□□□□□ -2.06
PCDH1Q08174 AP001362.1-201ENST00000625165 124 ntBASIC2.17□□□□□ -2.06
PCDH1Q08174 RNU6-1244P-201ENST00000363614 108 ntBASIC2.16□□□□□ -2.06
PCDH1Q08174 Y_RNA.567-201ENST00000384736 106 ntBASIC2.16□□□□□ -2.06
PCDH1Q08174 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.16□□□□□ -2.06
PCDH1Q08174 SPINT5P-201ENST00000448174 155 ntBASIC2.16□□□□□ -2.06
PCDH1Q08174 snoU13.2-201ENST00000459201 104 ntBASIC2.16□□□□□ -2.06
PCDH1Q08174 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.16□□□□□ -2.06
PCDH1Q08174 AC079804.2-201ENST00000490376 200 ntBASIC2.16□□□□□ -2.06
PCDH1Q08174 MIR4287-201ENST00000579398 78 ntBASIC2.16□□□□□ -2.06
PCDH1Q08174 MIR4713-201ENST00000582691 75 ntBASIC2.16□□□□□ -2.06
PCDH1Q08174 AP000942.3-201ENST00000603702 160 ntBASIC2.16□□□□□ -2.06
PCDH1Q08174 GHRLOS.1-201ENST00000610995 70 ntBASIC2.16□□□□□ -2.06
PCDH1Q08174 MIR8074-201ENST00000615081 81 ntBASIC2.16□□□□□ -2.06
PCDH1Q08174 WWP1P1-201ENST00000466609 2769 ntBASIC2.16□□□□□ -2.06
PCDH1Q08174 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.15□□□□□ -2.07
PCDH1Q08174 Y_RNA.73-201ENST00000362910 113 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms