Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 RNA5SP153-201ENST00000516498 76 ntBASIC-1.1□□□□□ -2.59
CDC42P60953 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.1□□□□□ -2.59
CDC42P60953 MIR5688-201ENST00000580619 83 ntBASIC-1.1□□□□□ -2.59
CDC42P60953 MIR5197-201ENST00000583721 112 ntBASIC-1.1□□□□□ -2.59
CDC42P60953 SNORD113-5-201ENST00000607261 78 ntBASIC-1.1□□□□□ -2.59
CDC42P60953 Y_RNA.91-201ENST00000363042 107 ntBASIC-1.11□□□□□ -2.59
CDC42P60953 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.11□□□□□ -2.59
CDC42P60953 Y_RNA.293-201ENST00000364908 93 ntBASIC-1.11□□□□□ -2.59
CDC42P60953 Y_RNA.295-201ENST00000364918 102 ntBASIC-1.11□□□□□ -2.59
CDC42P60953 Y_RNA.366-201ENST00000365540 102 ntBASIC-1.11□□□□□ -2.59
CDC42P60953 RNU6-35P-201ENST00000384530 107 ntBASIC-1.11□□□□□ -2.59
CDC42P60953 MIR526A2-201ENST00000390198 65 ntBASIC-1.11□□□□□ -2.59
CDC42P60953 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.11□□□□□ -2.59
CDC42P60953 MIR1265-201ENST00000408444 86 ntBASIC-1.11□□□□□ -2.59
CDC42P60953 RNA5SP25-201ENST00000410815 110 ntBASIC-1.11□□□□□ -2.59
CDC42P60953 Y_RNA.618-201ENST00000410949 107 ntBASIC-1.11□□□□□ -2.59
CDC42P60953 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.11□□□□□ -2.59
CDC42P60953 SPINT5P-201ENST00000448174 155 ntBASIC-1.11□□□□□ -2.59
CDC42P60953 AL500527.2-201ENST00000454105 95 ntBASIC-1.11□□□□□ -2.59
CDC42P60953 AL121655.1-201ENST00000605811 308 ntBASIC-1.11□□□□□ -2.59
CDC42P60953 AC069503.3-201ENST00000618674 145 ntBASIC-1.11□□□□□ -2.59
CDC42P60953 Y_RNA.515-201ENST00000384535 112 ntBASIC-1.12□□□□□ -2.59
CDC42P60953 RNU6-310P-201ENST00000384655 107 ntBASIC-1.12□□□□□ -2.59
CDC42P60953 MIR9-2-201ENST00000384838 87 ntBASIC-1.12□□□□□ -2.59
CDC42P60953 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.12□□□□□ -2.59
CDC42P60953 RNU6-881P-201ENST00000516813 102 ntBASIC-1.12□□□□□ -2.59
CDC42P60953 RNU6-175P-201ENST00000516896 107 ntBASIC-1.12□□□□□ -2.59
CDC42P60953 C8orf59P2-201ENST00000603441 271 ntBASIC-1.12□□□□□ -2.59
CDC42P60953 Y_RNA.286-201ENST00000364813 102 ntBASIC-1.13□□□□□ -2.59
CDC42P60953 Y_RNA.418-201ENST00000384029 102 ntBASIC-1.13□□□□□ -2.59
CDC42P60953 Y_RNA.439-201ENST00000384119 94 ntBASIC-1.13□□□□□ -2.59
CDC42P60953 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.13□□□□□ -2.59
CDC42P60953 TRAJ51-201ENST00000504127 63 ntBASIC-1.13□□□□□ -2.59
CDC42P60953 RNU7-13P-201ENST00000516413 62 ntBASIC-1.13□□□□□ -2.59
CDC42P60953 RNU7-70P-201ENST00000516941 66 ntBASIC-1.13□□□□□ -2.59
CDC42P60953 Y_RNA.713-201ENST00000517013 96 ntBASIC-1.13□□□□□ -2.59
CDC42P60953 Y_RNA.757-201ENST00000578934 114 ntBASIC-1.13□□□□□ -2.59
CDC42P60953 AC097639.2-201ENST00000603159 172 ntBASIC-1.13□□□□□ -2.59
CDC42P60953 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-1.13□□□□□ -2.59
CDC42P60953 DLEU2_2.2-201ENST00000615474 90 ntBASIC-1.13□□□□□ -2.59
CDC42P60953 Y_RNA.136-201ENST00000363444 102 ntBASIC-1.14□□□□□ -2.59
CDC42P60953 Y_RNA.222-201ENST00000364264 102 ntBASIC-1.14□□□□□ -2.59
CDC42P60953 Y_RNA.229-201ENST00000364347 113 ntBASIC-1.14□□□□□ -2.59
CDC42P60953 Y_RNA.374-201ENST00000365606 101 ntBASIC-1.14□□□□□ -2.59
CDC42P60953 RNU6-484P-201ENST00000384016 107 ntBASIC-1.14□□□□□ -2.59
CDC42P60953 Y_RNA.433-201ENST00000384089 102 ntBASIC-1.14□□□□□ -2.59
CDC42P60953 RNU6-890P-201ENST00000384121 107 ntBASIC-1.14□□□□□ -2.59
CDC42P60953 Y_RNA.542-201ENST00000384641 111 ntBASIC-1.14□□□□□ -2.59
CDC42P60953 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-1.14□□□□□ -2.59
CDC42P60953 IGKV1-22-201ENST00000524313 326 ntBASIC-1.14□□□□□ -2.59
CDC42P60953 YWHAEP2-201ENST00000580066 112 ntBASIC-1.14□□□□□ -2.59
CDC42P60953 MIR5690-201ENST00000583739 73 ntBASIC-1.14□□□□□ -2.59
CDC42P60953 MIR4760-201ENST00000585040 80 ntBASIC-1.14□□□□□ -2.59
CDC42P60953 Y_RNA.802-201ENST00000614892 130 ntBASIC-1.14□□□□□ -2.59
CDC42P60953 SNORD114-25-201ENST00000363742 72 ntBASIC-1.15□□□□□ -2.59
CDC42P60953 RNU4-36P-201ENST00000364294 144 ntBASIC-1.15□□□□□ -2.59
CDC42P60953 MIR539-201ENST00000365690 78 ntBASIC-1.15□□□□□ -2.59
CDC42P60953 RNU6-900P-201ENST00000384498 102 ntBASIC-1.15□□□□□ -2.59
CDC42P60953 SNORA53-201ENST00000391141 249 ntBASIC-1.15□□□□□ -2.59
CDC42P60953 AL445193.1-201ENST00000441183 141 ntBASIC-1.15□□□□□ -2.59
CDC42P60953 MRPS35P2-201ENST00000508242 191 ntBASIC-1.15□□□□□ -2.59
CDC42P60953 SNORA27.4-201ENST00000516650 95 ntBASIC-1.15□□□□□ -2.59
CDC42P60953 RNU6-1258P-201ENST00000516911 111 ntBASIC-1.15□□□□□ -2.59
CDC42P60953 AC040926.1-201ENST00000530195 238 ntBASIC-1.15□□□□□ -2.59
CDC42P60953 MTND5P40-201ENST00000559945 246 ntBASIC-1.15□□□□□ -2.59
CDC42P60953 AC007485.1-201ENST00000616755 206 ntBASIC-1.15□□□□□ -2.59
CDC42P60953 Y_RNA.143-201ENST00000363520 106 ntBASIC-1.16□□□□□ -2.6
CDC42P60953 RNU6-1188P-201ENST00000363795 107 ntBASIC-1.16□□□□□ -2.6
CDC42P60953 Y_RNA.813-201ENST00000364639 102 ntBASIC-1.16□□□□□ -2.6
CDC42P60953 Y_RNA.380-201ENST00000365663 111 ntBASIC-1.16□□□□□ -2.6
CDC42P60953 Y_RNA.424-201ENST00000384063 103 ntBASIC-1.16□□□□□ -2.6
CDC42P60953 Y_RNA.432-201ENST00000384087 111 ntBASIC-1.16□□□□□ -2.6
CDC42P60953 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-1.16□□□□□ -2.6
CDC42P60953 SNORA13-201ENST00000458790 133 ntBASIC-1.16□□□□□ -2.6
CDC42P60953 RNU7-137P-201ENST00000516788 62 ntBASIC-1.16□□□□□ -2.6
CDC42P60953 AC024909.2-201ENST00000553035 286 ntBASIC-1.16□□□□□ -2.6
CDC42P60953 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-1.16□□□□□ -2.6
CDC42P60953 AC048344.4-201ENST00000619744 527 ntBASIC-1.16□□□□□ -2.6
CDC42P60953 Y_RNA.86-201ENST00000363020 111 ntBASIC-1.17□□□□□ -2.6
CDC42P60953 SNORD114-10-201ENST00000363409 72 ntBASIC-1.17□□□□□ -2.6
CDC42P60953 RNU6-901P-201ENST00000384593 106 ntBASIC-1.17□□□□□ -2.6
CDC42P60953 RNU4-14P-201ENST00000410858 122 ntBASIC-1.17□□□□□ -2.6
CDC42P60953 PMCHL1-202ENST00000423102 261 ntBASIC-1.17□□□□□ -2.6
CDC42P60953 U8.20-201ENST00000459445 131 ntBASIC-1.17□□□□□ -2.6
CDC42P60953 MIR3129-201ENST00000581095 76 ntBASIC-1.17□□□□□ -2.6
CDC42P60953 MIR4280-201ENST00000582178 76 ntBASIC-1.17□□□□□ -2.6
CDC42P60953 RPS29P30-201ENST00000600975 111 ntBASIC-1.17□□□□□ -2.6
CDC42P60953 Y_RNA.171-201ENST00000363760 102 ntBASIC-1.18□□□□□ -2.6
CDC42P60953 Y_RNA.610-201ENST00000410681 103 ntBASIC-1.18□□□□□ -2.6
CDC42P60953 RNU6-370P-201ENST00000411008 104 ntBASIC-1.18□□□□□ -2.6
CDC42P60953 Y_RNA.635-201ENST00000459041 101 ntBASIC-1.18□□□□□ -2.6
CDC42P60953 RNA5SP395-201ENST00000516567 118 ntBASIC-1.18□□□□□ -2.6
CDC42P60953 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.18□□□□□ -2.6
CDC42P60953 AC245505.1-201ENST00000556398 224 ntBASIC-1.18□□□□□ -2.6
CDC42P60953 MIR3908-201ENST00000579798 126 ntBASIC-1.18□□□□□ -2.6
CDC42P60953 MIR4272-201ENST00000635924 64 ntBASIC-1.18□□□□□ -2.6
CDC42P60953 Y_RNA.23-201ENST00000362496 106 ntBASIC-1.19□□□□□ -2.6
CDC42P60953 RNU6-1272P-201ENST00000362776 107 ntBASIC-1.19□□□□□ -2.6
CDC42P60953 RNU5E-4P-201ENST00000364931 120 ntBASIC-1.19□□□□□ -2.6
CDC42P60953 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.19□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms