Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 U8.15-201ENST00000390947 134 ntBASIC2.23□□□□□ -2.05
ERVFC1P60507 HMGN2P39-201ENST00000398005 273 ntBASIC2.23□□□□□ -2.05
ERVFC1P60507 RNU6-402P-201ENST00000410678 103 ntBASIC2.23□□□□□ -2.05
ERVFC1P60507 Y_RNA.620-201ENST00000411009 88 ntBASIC2.23□□□□□ -2.05
ERVFC1P60507 AC090844.1-201ENST00000422019 156 ntBASIC2.23□□□□□ -2.05
ERVFC1P60507 AL445685.2-201ENST00000422551 342 ntBASIC2.23□□□□□ -2.05
ERVFC1P60507 snoU13.27-201ENST00000459278 104 ntBASIC2.23□□□□□ -2.05
ERVFC1P60507 UBL5P1-201ENST00000507979 193 ntBASIC2.23□□□□□ -2.05
ERVFC1P60507 RNU7-2P-201ENST00000516096 62 ntBASIC2.23□□□□□ -2.05
ERVFC1P60507 SNORA74.3-201ENST00000517108 154 ntBASIC2.23□□□□□ -2.05
ERVFC1P60507 MIR4709-201ENST00000577272 72 ntBASIC2.23□□□□□ -2.05
ERVFC1P60507 AP000942.3-201ENST00000603702 160 ntBASIC2.23□□□□□ -2.05
ERVFC1P60507 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.23□□□□□ -2.05
ERVFC1P60507 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
ERVFC1P60507 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.23□□□□□ -2.05
ERVFC1P60507 MIR424-201ENST00000362227 98 ntBASIC2.22□□□□□ -2.05
ERVFC1P60507 SNORA32-201ENST00000384072 121 ntBASIC2.22□□□□□ -2.05
ERVFC1P60507 RNU6-279P-201ENST00000391297 101 ntBASIC2.22□□□□□ -2.05
ERVFC1P60507 RNU2-7P-201ENST00000410794 178 ntBASIC2.22□□□□□ -2.05
ERVFC1P60507 RNA5SP225-201ENST00000410874 135 ntBASIC2.22□□□□□ -2.05
ERVFC1P60507 MIR4668-201ENST00000582284 70 ntBASIC2.22□□□□□ -2.05
ERVFC1P60507 MIR6840-201ENST00000611937 71 ntBASIC2.22□□□□□ -2.05
ERVFC1P60507 Y_RNA.783-201ENST00000613546 102 ntBASIC2.22□□□□□ -2.05
ERVFC1P60507 Z97988.1-201ENST00000637697 135 ntBASIC2.22□□□□□ -2.05
ERVFC1P60507 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.05
ERVFC1P60507 SNORD38.1-201ENST00000363863 68 ntBASIC2.21□□□□□ -2.06
ERVFC1P60507 Y_RNA.338-201ENST00000365320 114 ntBASIC2.21□□□□□ -2.06
ERVFC1P60507 Y_RNA.354-201ENST00000365448 111 ntBASIC2.21□□□□□ -2.06
ERVFC1P60507 SNORA48.3-201ENST00000391081 134 ntBASIC2.21□□□□□ -2.06
ERVFC1P60507 SNORA31.25-201ENST00000517242 134 ntBASIC2.21□□□□□ -2.06
ERVFC1P60507 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.21□□□□□ -2.06
ERVFC1P60507 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
ERVFC1P60507 AL596028.1-201ENST00000326971 197 ntBASIC2.2□□□□□ -2.06
ERVFC1P60507 Y_RNA.247-201ENST00000364500 92 ntBASIC2.2□□□□□ -2.06
ERVFC1P60507 RNU6-1163P-201ENST00000364516 107 ntBASIC2.2□□□□□ -2.06
ERVFC1P60507 MIR206-201ENST00000384872 86 ntBASIC2.2□□□□□ -2.06
ERVFC1P60507 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.2□□□□□ -2.06
ERVFC1P60507 RNA5SP501-201ENST00000410990 112 ntBASIC2.2□□□□□ -2.06
ERVFC1P60507 RPL23AP6-201ENST00000446637 472 ntBASIC2.2□□□□□ -2.06
ERVFC1P60507 RNU7-43P-201ENST00000516554 64 ntBASIC2.2□□□□□ -2.06
ERVFC1P60507 RNU6-267P-201ENST00000516714 103 ntBASIC2.2□□□□□ -2.06
ERVFC1P60507 MIR4529-201ENST00000578110 78 ntBASIC2.2□□□□□ -2.06
ERVFC1P60507 MIR376B-201ENST00000614515 100 ntBASIC2.2□□□□□ -2.06
ERVFC1P60507 MIR8065-201ENST00000620577 100 ntBASIC2.2□□□□□ -2.06
ERVFC1P60507 AC080100.1-201ENST00000624239 5356 ntBASIC2.2□□□□□ -2.06
ERVFC1P60507 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.2□□□□□ -2.06
ERVFC1P60507 Y_RNA.4-201ENST00000362333 112 ntBASIC2.19□□□□□ -2.06
ERVFC1P60507 Y_RNA.164-201ENST00000363709 102 ntBASIC2.19□□□□□ -2.06
ERVFC1P60507 SNORA40.18-201ENST00000391200 128 ntBASIC2.19□□□□□ -2.06
ERVFC1P60507 AC055731.1-201ENST00000474387 401 ntBASIC2.19□□□□□ -2.06
ERVFC1P60507 RNU2-19P-201ENST00000517288 84 ntBASIC2.19□□□□□ -2.06
ERVFC1P60507 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.19□□□□□ -2.06
ERVFC1P60507 SNORA16B-201ENST00000364674 135 ntBASIC2.18□□□□□ -2.06
ERVFC1P60507 Y_RNA.426-201ENST00000384068 113 ntBASIC2.18□□□□□ -2.06
ERVFC1P60507 RNU6-342P-201ENST00000384521 104 ntBASIC2.18□□□□□ -2.06
ERVFC1P60507 MIR583-201ENST00000384846 75 ntBASIC2.18□□□□□ -2.06
ERVFC1P60507 RNU6-1086P-201ENST00000410930 100 ntBASIC2.18□□□□□ -2.06
ERVFC1P60507 RNA5SP247-201ENST00000411181 105 ntBASIC2.18□□□□□ -2.06
ERVFC1P60507 HMGN1P33-201ENST00000432945 451 ntBASIC2.18□□□□□ -2.06
ERVFC1P60507 AC245047.7-201ENST00000440265 293 ntBASIC2.18□□□□□ -2.06
ERVFC1P60507 FAM106DP-201ENST00000586416 501 ntBASIC2.18□□□□□ -2.06
ERVFC1P60507 U1.36-201ENST00000620684 176 ntBASIC2.18□□□□□ -2.06
ERVFC1P60507 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
ERVFC1P60507 ZNF355P-201ENST00000427301 3216 ntBASIC2.17□□□□□ -2.06
ERVFC1P60507 AC019129.1-201ENST00000403786 261 ntBASIC2.17□□□□□ -2.06
ERVFC1P60507 RNU6-447P-201ENST00000410293 104 ntBASIC2.17□□□□□ -2.06
ERVFC1P60507 RNU6-1118P-201ENST00000410382 104 ntBASIC2.17□□□□□ -2.06
ERVFC1P60507 RNU6-1076P-201ENST00000410397 104 ntBASIC2.17□□□□□ -2.06
ERVFC1P60507 RNU6-355P-201ENST00000410427 104 ntBASIC2.17□□□□□ -2.06
ERVFC1P60507 RNU6-791P-201ENST00000410467 104 ntBASIC2.17□□□□□ -2.06
ERVFC1P60507 RNU6-705P-201ENST00000410601 104 ntBASIC2.17□□□□□ -2.06
ERVFC1P60507 RNU6-1100P-201ENST00000410691 104 ntBASIC2.17□□□□□ -2.06
ERVFC1P60507 RNU6-860P-201ENST00000410860 104 ntBASIC2.17□□□□□ -2.06
ERVFC1P60507 RNU6-1217P-201ENST00000411276 104 ntBASIC2.17□□□□□ -2.06
ERVFC1P60507 RNU6-785P-201ENST00000411324 104 ntBASIC2.17□□□□□ -2.06
ERVFC1P60507 U6.90-201ENST00000614007 104 ntBASIC2.17□□□□□ -2.06
ERVFC1P60507 U6.70-201ENST00000620287 104 ntBASIC2.17□□□□□ -2.06
ERVFC1P60507 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
ERVFC1P60507 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
ERVFC1P60507 SNORD114-10-201ENST00000363409 72 ntBASIC2.16□□□□□ -2.06
ERVFC1P60507 RNU6-457P-201ENST00000363999 107 ntBASIC2.16□□□□□ -2.06
ERVFC1P60507 MIR17-201ENST00000385012 84 ntBASIC2.16□□□□□ -2.06
ERVFC1P60507 RNU6-1307P-201ENST00000391012 103 ntBASIC2.16□□□□□ -2.06
ERVFC1P60507 RNU6-602P-201ENST00000411155 105 ntBASIC2.16□□□□□ -2.06
ERVFC1P60507 RNU6-86P-201ENST00000606534 107 ntBASIC2.16□□□□□ -2.06
ERVFC1P60507 AC103810.7-201ENST00000607821 91 ntBASIC2.16□□□□□ -2.06
ERVFC1P60507 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
ERVFC1P60507 Y_RNA.244-201ENST00000364484 109 ntBASIC2.15□□□□□ -2.07
ERVFC1P60507 RNU6-360P-201ENST00000390944 104 ntBASIC2.15□□□□□ -2.07
ERVFC1P60507 RNA5SP100-201ENST00000410903 110 ntBASIC2.15□□□□□ -2.07
ERVFC1P60507 RNA5SP59-201ENST00000410922 110 ntBASIC2.15□□□□□ -2.07
ERVFC1P60507 RPS27P21-201ENST00000486977 252 ntBASIC2.15□□□□□ -2.07
ERVFC1P60507 RNA5SP182-201ENST00000516064 82 ntBASIC2.15□□□□□ -2.07
ERVFC1P60507 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.15□□□□□ -2.07
ERVFC1P60507 MIR4764-201ENST00000580680 88 ntBASIC2.15□□□□□ -2.07
ERVFC1P60507 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.15□□□□□ -2.07
ERVFC1P60507 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.15□□□□□ -2.07
ERVFC1P60507 AC008133.2-201ENST00000624540 351 ntBASIC2.15□□□□□ -2.07
ERVFC1P60507 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
ERVFC1P60507 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 188.2 ms