Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 MIR569-201ENST00000385228 96 ntBASIC1.11□□□□□ -2.23
HDAC4P56524 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.11□□□□□ -2.23
HDAC4P56524 Y_RNA.651-201ENST00000459380 103 ntBASIC1.11□□□□□ -2.23
HDAC4P56524 AC036111.3-201ENST00000526389 112 ntBASIC1.11□□□□□ -2.23
HDAC4P56524 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.11□□□□□ -2.23
HDAC4P56524 SNORD114-21-201ENST00000606412 72 ntBASIC1.11□□□□□ -2.23
HDAC4P56524 MIR6841-201ENST00000637129 72 ntBASIC1.11□□□□□ -2.23
HDAC4P56524 RNU6-1187P-201ENST00000364771 110 ntBASIC1.1□□□□□ -2.23
HDAC4P56524 RNU1-133P-201ENST00000364867 167 ntBASIC1.1□□□□□ -2.23
HDAC4P56524 RNU6-396P-201ENST00000365369 105 ntBASIC1.1□□□□□ -2.23
HDAC4P56524 Y_RNA.400-201ENST00000383963 111 ntBASIC1.1□□□□□ -2.23
HDAC4P56524 Y_RNA.454-201ENST00000384224 113 ntBASIC1.1□□□□□ -2.23
HDAC4P56524 RNU6-1319P-201ENST00000390855 104 ntBASIC1.1□□□□□ -2.23
HDAC4P56524 RNU6-747P-201ENST00000390928 104 ntBASIC1.1□□□□□ -2.23
HDAC4P56524 RNU6-241P-201ENST00000391148 104 ntBASIC1.1□□□□□ -2.23
HDAC4P56524 RNU6-460P-201ENST00000391158 108 ntBASIC1.1□□□□□ -2.23
HDAC4P56524 RNU6-177P-201ENST00000411257 104 ntBASIC1.1□□□□□ -2.23
HDAC4P56524 RPS23P4-201ENST00000487908 423 ntBASIC1.1□□□□□ -2.23
HDAC4P56524 RNU6-113P-201ENST00000516653 101 ntBASIC1.1□□□□□ -2.23
HDAC4P56524 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.1□□□□□ -2.23
HDAC4P56524 uc_338.6-201ENST00000613544 171 ntBASIC1.1□□□□□ -2.23
HDAC4P56524 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
HDAC4P56524 Y_RNA.215-201ENST00000364204 112 ntBASIC1.09□□□□□ -2.23
HDAC4P56524 RNU6-309P-201ENST00000364573 106 ntBASIC1.09□□□□□ -2.23
HDAC4P56524 SNORA1.1-201ENST00000364671 133 ntBASIC1.09□□□□□ -2.23
HDAC4P56524 RNU6-580P-201ENST00000365159 107 ntBASIC1.09□□□□□ -2.23
HDAC4P56524 MT-TN-201ENST00000387400 73 ntBASIC1.09□□□□□ -2.23
HDAC4P56524 Y_RNA.584-201ENST00000391090 114 ntBASIC1.09□□□□□ -2.23
HDAC4P56524 AC087343.1-201ENST00000477341 475 ntBASIC1.09□□□□□ -2.23
HDAC4P56524 RNU6-346P-201ENST00000516288 111 ntBASIC1.09□□□□□ -2.23
HDAC4P56524 AC023827.1-201ENST00000569247 97 ntBASIC1.09□□□□□ -2.23
HDAC4P56524 MIR4295-201ENST00000585286 85 ntBASIC1.09□□□□□ -2.23
HDAC4P56524 AC021613.1-201ENST00000623880 111 ntBASIC1.09□□□□□ -2.23
HDAC4P56524 MIR302B-201ENST00000362188 73 ntBASIC1.08□□□□□ -2.24
HDAC4P56524 RNU4-16P-201ENST00000364737 141 ntBASIC1.08□□□□□ -2.24
HDAC4P56524 Y_RNA.430-201ENST00000384081 110 ntBASIC1.08□□□□□ -2.24
HDAC4P56524 RNU6-205P-201ENST00000390858 107 ntBASIC1.08□□□□□ -2.24
HDAC4P56524 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.08□□□□□ -2.24
HDAC4P56524 RNA5SP272-201ENST00000516095 111 ntBASIC1.08□□□□□ -2.24
HDAC4P56524 SNORA25.12-201ENST00000516202 82 ntBASIC1.08□□□□□ -2.24
HDAC4P56524 RNU6-1258P-201ENST00000516911 111 ntBASIC1.08□□□□□ -2.24
HDAC4P56524 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.08□□□□□ -2.24
HDAC4P56524 AC103810.9-201ENST00000606688 112 ntBASIC1.08□□□□□ -2.24
HDAC4P56524 AC012676.2-201ENST00000619258 186 ntBASIC1.08□□□□□ -2.24
HDAC4P56524 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.07□□□□□ -2.24
HDAC4P56524 MIR377-201ENST00000362145 69 ntBASIC1.07□□□□□ -2.24
HDAC4P56524 Y_RNA.120-201ENST00000363304 110 ntBASIC1.07□□□□□ -2.24
HDAC4P56524 RNY1P6-201ENST00000384193 109 ntBASIC1.07□□□□□ -2.24
HDAC4P56524 RNY1P4-201ENST00000384595 115 ntBASIC1.07□□□□□ -2.24
HDAC4P56524 MIR216A-201ENST00000385063 110 ntBASIC1.07□□□□□ -2.24
HDAC4P56524 SNORD12C-201ENST00000386307 89 ntBASIC1.07□□□□□ -2.24
HDAC4P56524 UBL5P1-201ENST00000507979 193 ntBASIC1.07□□□□□ -2.24
HDAC4P56524 MIR5000-201ENST00000577717 103 ntBASIC1.07□□□□□ -2.24
HDAC4P56524 MIR548X2-201ENST00000579776 100 ntBASIC1.07□□□□□ -2.24
HDAC4P56524 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.07□□□□□ -2.24
HDAC4P56524 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.07□□□□□ -2.24
HDAC4P56524 AC106800.4-201ENST00000614905 153 ntBASIC1.07□□□□□ -2.24
HDAC4P56524 MIR6740-201ENST00000618268 113 ntBASIC1.07□□□□□ -2.24
HDAC4P56524 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
HDAC4P56524 Y_RNA.168-201ENST00000363740 102 ntBASIC1.06□□□□□ -2.24
HDAC4P56524 Y_RNA.178-201ENST00000363832 102 ntBASIC1.06□□□□□ -2.24
HDAC4P56524 RNY1P5-201ENST00000383890 115 ntBASIC1.06□□□□□ -2.24
HDAC4P56524 SNORA20-201ENST00000384662 132 ntBASIC1.06□□□□□ -2.24
HDAC4P56524 AL603914.1-201ENST00000401964 204 ntBASIC1.06□□□□□ -2.24
HDAC4P56524 snoU13.21-201ENST00000459368 105 ntBASIC1.06□□□□□ -2.24
HDAC4P56524 SNORD124-201ENST00000459577 104 ntBASIC1.06□□□□□ -2.24
HDAC4P56524 RNU7-70P-201ENST00000516941 66 ntBASIC1.06□□□□□ -2.24
HDAC4P56524 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.06□□□□□ -2.24
HDAC4P56524 MIR4264-201ENST00000583520 66 ntBASIC1.06□□□□□ -2.24
HDAC4P56524 AP000753.3-201ENST00000604083 169 ntBASIC1.06□□□□□ -2.24
HDAC4P56524 MIR6767-201ENST00000637302 66 ntBASIC1.06□□□□□ -2.24
HDAC4P56524 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
HDAC4P56524 AL391516.1-201ENST00000554380 2449 ntBASIC1.06□□□□□ -2.24
HDAC4P56524 RNU4-38P-201ENST00000364472 129 ntBASIC1.05□□□□□ -2.24
HDAC4P56524 SNORD38B-201ENST00000384690 67 ntBASIC1.05□□□□□ -2.24
HDAC4P56524 MIR200A-201ENST00000384875 90 ntBASIC1.05□□□□□ -2.24
HDAC4P56524 RPS3AP1-201ENST00000413190 320 ntBASIC1.05□□□□□ -2.24
HDAC4P56524 RNU6-426P-201ENST00000516464 97 ntBASIC1.05□□□□□ -2.24
HDAC4P56524 Y_RNA.690-201ENST00000516603 95 ntBASIC1.05□□□□□ -2.24
HDAC4P56524 AC108081.1-201ENST00000604358 221 ntBASIC1.05□□□□□ -2.24
HDAC4P56524 RNU6-94P-201ENST00000607728 107 ntBASIC1.05□□□□□ -2.24
HDAC4P56524 SNORD38B-202ENST00000625943 69 ntBASIC1.05□□□□□ -2.24
HDAC4P56524 SNORA22.1-201ENST00000362701 134 ntBASIC1.04□□□□□ -2.24
HDAC4P56524 SNORD113.3-201ENST00000364630 78 ntBASIC1.04□□□□□ -2.24
HDAC4P56524 RNU6-915P-201ENST00000364943 103 ntBASIC1.04□□□□□ -2.24
HDAC4P56524 SNORD114-24-201ENST00000365029 72 ntBASIC1.04□□□□□ -2.24
HDAC4P56524 RNU6-1062P-201ENST00000383908 107 ntBASIC1.04□□□□□ -2.24
HDAC4P56524 Y_RNA.420-201ENST00000384043 110 ntBASIC1.04□□□□□ -2.24
HDAC4P56524 MIR563-201ENST00000385080 79 ntBASIC1.04□□□□□ -2.24
HDAC4P56524 MIR513C-201ENST00000401352 84 ntBASIC1.04□□□□□ -2.24
HDAC4P56524 RNA5SP144-201ENST00000410846 116 ntBASIC1.04□□□□□ -2.24
HDAC4P56524 RPL39P28-201ENST00000465655 155 ntBASIC1.04□□□□□ -2.24
HDAC4P56524 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.04□□□□□ -2.24
HDAC4P56524 RNU6-240P-201ENST00000516098 97 ntBASIC1.04□□□□□ -2.24
HDAC4P56524 Y_RNA.757-201ENST00000578934 114 ntBASIC1.04□□□□□ -2.24
HDAC4P56524 MIR4661-201ENST00000582720 75 ntBASIC1.04□□□□□ -2.24
HDAC4P56524 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.04□□□□□ -2.24
HDAC4P56524 RNU6-369P-201ENST00000362515 102 ntBASIC1.03□□□□□ -2.24
HDAC4P56524 SNORA2B-201ENST00000384583 137 ntBASIC1.03□□□□□ -2.24
HDAC4P56524 SNORD111-201ENST00000408139 94 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 168.2 ms