Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 RNY4P20-201ENST00000516678 93 ntBASIC1.11□□□□□ -2.23
CDH12P55289 RNU6-1234P-201ENST00000516877 103 ntBASIC1.11□□□□□ -2.23
CDH12P55289 AC023827.1-201ENST00000569247 97 ntBASIC1.11□□□□□ -2.23
CDH12P55289 uc_338.6-201ENST00000613544 171 ntBASIC1.11□□□□□ -2.23
CDH12P55289 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
CDH12P55289 Y_RNA.168-201ENST00000363740 102 ntBASIC1.1□□□□□ -2.23
CDH12P55289 SNORA2B-201ENST00000384583 137 ntBASIC1.1□□□□□ -2.23
CDH12P55289 RNU4-61P-201ENST00000411243 107 ntBASIC1.1□□□□□ -2.23
CDH12P55289 RNU6-893P-201ENST00000458841 100 ntBASIC1.1□□□□□ -2.23
CDH12P55289 RNU7-107P-201ENST00000459121 61 ntBASIC1.1□□□□□ -2.23
CDH12P55289 snoU13.2-201ENST00000459201 104 ntBASIC1.1□□□□□ -2.23
CDH12P55289 RNU7-90P-201ENST00000459216 62 ntBASIC1.1□□□□□ -2.23
CDH12P55289 RNU7-95P-201ENST00000459222 64 ntBASIC1.1□□□□□ -2.23
CDH12P55289 RNU7-113P-201ENST00000459273 62 ntBASIC1.1□□□□□ -2.23
CDH12P55289 AC113410.1-201ENST00000505029 247 ntBASIC1.1□□□□□ -2.23
CDH12P55289 AC004812.1-201ENST00000540773 146 ntBASIC1.1□□□□□ -2.23
CDH12P55289 Y_RNA.71-201ENST00000362892 104 ntBASIC1.09□□□□□ -2.23
CDH12P55289 Y_RNA.140-201ENST00000363474 103 ntBASIC1.09□□□□□ -2.23
CDH12P55289 SNORA7.1-201ENST00000363750 139 ntBASIC1.09□□□□□ -2.23
CDH12P55289 RNA5SP99-201ENST00000364020 114 ntBASIC1.09□□□□□ -2.23
CDH12P55289 Y_RNA.525-201ENST00000384570 113 ntBASIC1.09□□□□□ -2.23
CDH12P55289 Y_RNA.531-201ENST00000384589 121 ntBASIC1.09□□□□□ -2.23
CDH12P55289 RNU6-939P-201ENST00000384634 107 ntBASIC1.09□□□□□ -2.23
CDH12P55289 RNU6-959P-201ENST00000384671 107 ntBASIC1.09□□□□□ -2.23
CDH12P55289 MIR588-201ENST00000384900 83 ntBASIC1.09□□□□□ -2.23
CDH12P55289 MRPL35P3-201ENST00000421557 364 ntBASIC1.09□□□□□ -2.23
CDH12P55289 AC063976.4-201ENST00000421971 163 ntBASIC1.09□□□□□ -2.23
CDH12P55289 RNU7-62P-201ENST00000458856 62 ntBASIC1.09□□□□□ -2.23
CDH12P55289 AC022523.2-201ENST00000561045 150 ntBASIC1.09□□□□□ -2.23
CDH12P55289 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.08□□□□□ -2.24
CDH12P55289 SNORD115-2-201ENST00000362842 82 ntBASIC1.08□□□□□ -2.24
CDH12P55289 SNORD113.3-201ENST00000364630 78 ntBASIC1.08□□□□□ -2.24
CDH12P55289 SNORD115-20-201ENST00000365099 82 ntBASIC1.08□□□□□ -2.24
CDH12P55289 RNU6-80P-201ENST00000384195 107 ntBASIC1.08□□□□□ -2.24
CDH12P55289 RNU6-342P-201ENST00000384521 104 ntBASIC1.08□□□□□ -2.24
CDH12P55289 RNU6-1104P-201ENST00000384723 104 ntBASIC1.08□□□□□ -2.24
CDH12P55289 MIR563-201ENST00000385080 79 ntBASIC1.08□□□□□ -2.24
CDH12P55289 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.08□□□□□ -2.24
CDH12P55289 MIR1263-201ENST00000408324 86 ntBASIC1.08□□□□□ -2.24
CDH12P55289 AC108667.1-201ENST00000428618 249 ntBASIC1.08□□□□□ -2.24
CDH12P55289 snoU13.21-201ENST00000459368 105 ntBASIC1.08□□□□□ -2.24
CDH12P55289 AC106800.4-201ENST00000614905 153 ntBASIC1.08□□□□□ -2.24
CDH12P55289 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.08□□□□□ -2.24
CDH12P55289 AC132825.6-201ENST00000638861 357 ntBASIC1.08□□□□□ -2.24
CDH12P55289 SNORD58C-201ENST00000365223 64 ntBASIC1.07□□□□□ -2.24
CDH12P55289 SNORA18-201ENST00000384416 132 ntBASIC1.07□□□□□ -2.24
CDH12P55289 RNU6-1237P-201ENST00000384777 107 ntBASIC1.07□□□□□ -2.24
CDH12P55289 MIRLET7F2-201ENST00000385277 83 ntBASIC1.07□□□□□ -2.24
CDH12P55289 MT-TI-201ENST00000387365 69 ntBASIC1.07□□□□□ -2.24
CDH12P55289 RNU6-482P-201ENST00000391068 107 ntBASIC1.07□□□□□ -2.24
CDH12P55289 Y_RNA.630-201ENST00000411370 108 ntBASIC1.07□□□□□ -2.24
CDH12P55289 RNU6-772P-201ENST00000516042 105 ntBASIC1.07□□□□□ -2.24
CDH12P55289 RNU6-1061P-201ENST00000516530 99 ntBASIC1.07□□□□□ -2.24
CDH12P55289 RNA5SP33-201ENST00000516687 98 ntBASIC1.07□□□□□ -2.24
CDH12P55289 MIR4781-201ENST00000585250 76 ntBASIC1.07□□□□□ -2.24
CDH12P55289 RNU6-94P-201ENST00000607728 107 ntBASIC1.07□□□□□ -2.24
CDH12P55289 MIR19B1-201ENST00000384829 87 ntBASIC1.06□□□□□ -2.24
CDH12P55289 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.06□□□□□ -2.24
CDH12P55289 RNU6-1165P-201ENST00000410119 107 ntBASIC1.06□□□□□ -2.24
CDH12P55289 RNA5SP404-201ENST00000517118 132 ntBASIC1.06□□□□□ -2.24
CDH12P55289 MIR548AE2-201ENST00000583456 67 ntBASIC1.06□□□□□ -2.24
CDH12P55289 MIR30D-201ENST00000362283 70 ntBASIC1.05□□□□□ -2.24
CDH12P55289 SNORD116-14-201ENST00000383894 92 ntBASIC1.05□□□□□ -2.24
CDH12P55289 SNORD116-17-201ENST00000383929 92 ntBASIC1.05□□□□□ -2.24
CDH12P55289 SNORD116-15-201ENST00000384445 92 ntBASIC1.05□□□□□ -2.24
CDH12P55289 SNORD116-19-201ENST00000384729 92 ntBASIC1.05□□□□□ -2.24
CDH12P55289 SNORD111-201ENST00000408139 94 ntBASIC1.05□□□□□ -2.24
CDH12P55289 MIR1270-201ENST00000459320 83 ntBASIC1.05□□□□□ -2.24
CDH12P55289 RNU6-659P-201ENST00000516454 104 ntBASIC1.05□□□□□ -2.24
CDH12P55289 RNU6-406P-201ENST00000516470 107 ntBASIC1.05□□□□□ -2.24
CDH12P55289 AL662814.1-201ENST00000617364 121 ntBASIC1.05□□□□□ -2.24
CDH12P55289 AC012676.2-201ENST00000619258 186 ntBASIC1.05□□□□□ -2.24
CDH12P55289 AL353770.2-201ENST00000620024 78 ntBASIC1.05□□□□□ -2.24
CDH12P55289 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.04□□□□□ -2.24
CDH12P55289 SNORA25.8-201ENST00000364831 128 ntBASIC1.04□□□□□ -2.24
CDH12P55289 SNORA32-201ENST00000384072 121 ntBASIC1.04□□□□□ -2.24
CDH12P55289 MIR618-201ENST00000385287 98 ntBASIC1.04□□□□□ -2.24
CDH12P55289 AP1B1P2-201ENST00000416196 106 ntBASIC1.04□□□□□ -2.24
CDH12P55289 BTF3P4-201ENST00000418852 495 ntBASIC1.04□□□□□ -2.24
CDH12P55289 RPS23P4-201ENST00000487908 423 ntBASIC1.04□□□□□ -2.24
CDH12P55289 Y_RNA.127-201ENST00000363386 109 ntBASIC1.03□□□□□ -2.24
CDH12P55289 RNU1-124P-201ENST00000363861 145 ntBASIC1.03□□□□□ -2.24
CDH12P55289 SNORD113-1-201ENST00000365321 69 ntBASIC1.03□□□□□ -2.24
CDH12P55289 Y_RNA.528-201ENST00000384575 108 ntBASIC1.03□□□□□ -2.24
CDH12P55289 RNA5SP237-201ENST00000410414 113 ntBASIC1.03□□□□□ -2.24
CDH12P55289 RNA5SP136-201ENST00000410906 107 ntBASIC1.03□□□□□ -2.24
CDH12P55289 SNORD83.1-201ENST00000411362 77 ntBASIC1.03□□□□□ -2.24
CDH12P55289 SNORD124-201ENST00000459577 104 ntBASIC1.03□□□□□ -2.24
CDH12P55289 RNU6-1333P-201ENST00000516162 93 ntBASIC1.03□□□□□ -2.24
CDH12P55289 RNA5SP458-201ENST00000516188 119 ntBASIC1.03□□□□□ -2.24
CDH12P55289 Y_RNA.712-201ENST00000517011 92 ntBASIC1.03□□□□□ -2.24
CDH12P55289 RNU6-789P-201ENST00000517105 102 ntBASIC1.03□□□□□ -2.24
CDH12P55289 RNU7-35P-201ENST00000517174 62 ntBASIC1.03□□□□□ -2.24
CDH12P55289 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.03□□□□□ -2.24
CDH12P55289 AC141846.1-201ENST00000568348 142 ntBASIC1.03□□□□□ -2.24
CDH12P55289 MIR4769-201ENST00000584126 77 ntBASIC1.03□□□□□ -2.24
CDH12P55289 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.03□□□□□ -2.24
CDH12P55289 AC025166.1-201ENST00000612411 163 ntBASIC1.03□□□□□ -2.24
CDH12P55289 AL365222.1-201ENST00000614661 98 ntBASIC1.03□□□□□ -2.24
CDH12P55289 AL157834.3-201ENST00000615543 103 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms